https://github.com/vsbuffalo/paradox_variation
Raw File
Tip revision: 8fa6b5834f6536319b1e5cd9722ca02d317183df authored by Vince Buffalo on 12 August 2021, 01:04:21 UTC
updated ms
Tip revision: 8fa6b58
leffler_et_al_2012_updated.tsv
species	phylum	size	site_type	diversity	habitat	mating_system	range_cat	genus
Acyrthosiphon pisum	Arthropoda	NA	non-coding	0.0088125	Terrestrial	Partial selfing	Cosmopolitan	Acyrthosiphon
Aedes aegypti	Arthropoda	NA	non-coding	0.01421	Terrestrial	Obligatory outcrossing	Cosmopolitan	Aedes
Agelaius phoeniceus	Chordata	0.22	intronic	0.0059	Terrestrial	Obligatory outcrossing	Broad endemic	Agelaius
Ailuropoda melanoleuca	Chordata	1.53924	genome-wide	0.00135	Terrestrial	Obligatory outcrossing	Narrow endemic	Ailuropoda
Amphimedon queenslandica	Porifera	0.15	genome-wide	0.023700000000000002	Marine	Partial selfing	Broad endemic	Amphimedon
Anopheles arabiensis	Arthropoda	0.00295	mixed	0.022000000000000002	Terrestrial	Obligatory outcrossing	Broad endemic	Anopheles
Anopheles baimaii	Arthropoda	NA	mixed	0.00541	Terrestrial	Obligatory outcrossing	Broad endemic	Anopheles
Anopheles cruzii	Arthropoda	NA	mixed	0.01439	Terrestrial	Obligatory outcrossing	Broad endemic	Anopheles
Anopheles dirus	Arthropoda	NA	mixed	0.009715	Terrestrial	Obligatory outcrossing	Broad endemic	Anopheles
Anopheles gambiae	Arthropoda	0.00295	mixed	0.0288	Terrestrial	Obligatory outcrossing	Broad endemic	Anopheles
Anopheles melas	Arthropoda	NA	mixed	0.005699999999999999	Terrestrial	Obligatory outcrossing	Broad endemic	Anopheles
Anopheles merus	Arthropoda	0.00303	mixed	0.0124	Terrestrial	Obligatory outcrossing	Broad endemic	Anopheles
Anopheles quadriannulatus	Arthropoda	0.0055	mixed	0.022799999999999997	Terrestrial	Obligatory outcrossing	Broad endemic	Anopheles
Anopheles scanloni	Arthropoda	NA	mixed	0.0058	Terrestrial	Obligatory outcrossing	Narrow endemic	Anopheles
Aphanarthrum subglabrum/glabrum	Arthropoda	0.00155	mixed	0.00189	Terrestrial	Obligatory outcrossing	Island	Aphanarthrum
Apis cerana	Arthropoda	NA	non-coding	0.00848	Terrestrial	Partial selfing	Broad endemic	Apis
Apis mellifera	Arthropoda	NA	non-coding	0.00848	Terrestrial	Partial selfing	Cosmopolitan	Apis
Aquila clanga/pomarina	Chordata	0.65	intronic	0.001143	Terrestrial	Obligatory outcrossing	Broad endemic	Aquila
Aquilegia formosa/pubescens	Magnoliophyta	0.6	synonymous	0.00228	Terrestrial	Partial selfing	Broad endemic	Aquilegia
Arabidopsis halleri	Magnoliophyta	NA	silent	0.01502	Terrestrial	Obligatory outcrossing	Broad endemic	Arabidopsis
Arabidopsis lyrata	Magnoliophyta	0.25	silent	0.009116666666666667	Terrestrial	Obligatory outcrossing	Cosmopolitan	Arabidopsis
Arabidopsis thaliana	Magnoliophyta	NA	4-fold degenerate	0.0055000000000000005	Terrestrial	Partial selfing	Cosmopolitan	Arabidopsis
Arabidopsis thaliana	Magnoliophyta	NA	intronic	0.006500000000000001	Terrestrial	Partial selfing	Cosmopolitan	Arabidopsis
Arabidopsis thaliana	Magnoliophyta	NA	non-coding	0.0060999999999999995	Terrestrial	Partial selfing	Cosmopolitan	Arabidopsis
Bactrocera depressa	Arthropoda	0.00745	mixed	0.0023	Terrestrial	Obligatory outcrossing	Broad endemic	Bactrocera
Balaenoptera bonaerensis	Chordata	5.4864	intronic	0.00387	Marine	Obligatory outcrossing	Cosmopolitan	Balaenoptera
Boechera stricta	Magnoliophyta	0.6	silent	0.0034999999999999996	Terrestrial	Partial selfing	Broad endemic	Boechera
Caenorhabditis briggsae	Nematoda	0.0014	silent	3.7749999999999996e-4	Terrestrial	Partial selfing	Cosmopolitan	Caenorhabditis
Caenorhabditis elegans	Nematoda	0.0014	silent	0.003715	Terrestrial	Partial selfing	Cosmopolitan	Caenorhabditis
Caenorhabditis remanei	Nematoda	0.0014	silent	0.0567	Terrestrial	Obligatory outcrossing	Cosmopolitan	Caenorhabditis
Callithrix jacchus	Chordata	0.18669	synonymous	0.00123	Terrestrial	Obligatory outcrossing	Narrow endemic	Callithrix
Canis latrans/lupus	Chordata	0.80772	intronic	0.001712	Terrestrial	Obligatory outcrossing	Cosmopolitan	Canis
Capsella grandiflora	Magnoliophyta	0.3	synonymous	0.03202	Terrestrial	Obligatory outcrossing	Narrow endemic	Capsella
Capsella rubella	Magnoliophyta	0.2	synonymous	0.00666	Terrestrial	Partial selfing	Cosmopolitan	Capsella
Cecidostiba fungosa	Arthropoda	0.0018	intronic	0.01165	Terrestrial	Obligatory outcrossing	Broad endemic	Cecidostiba
Cecidostiba fungosa	Arthropoda	0.0018	synonymous	0.01088	Terrestrial	Obligatory outcrossing	Broad endemic	Cecidostiba
Ceratitis capitata	Arthropoda	0.004	intronic	0.02951	Terrestrial	Obligatory outcrossing	Cosmopolitan	Ceratitis
Chlamydomonas reinhardtii	Chlorophyta	NA	intronic	0.03613	Terrestrial and freshwater	Partial selfing	Cosmopolitan	Chlamydomonas
Chlamydomonas reinhardtii	Chlorophyta	NA	synonymous	0.02086	Terrestrial and freshwater	Partial selfing	Cosmopolitan	Chlamydomonas
Chlorocebus aethiops	Chordata	0.458	synonymous	0.00233	Terrestrial	Obligatory outcrossing	Narrow endemic	Chlorocebus
Cichla pleiozona	Chordata	0.4572	intronic	0.010333333333333333	Freshwater	Obligatory outcrossing	Narrow endemic	Cichla
Ciona intestinalis	Chordata	0.2	non-coding	0.025035	Marine	Obligatory outcrossing	Cosmopolitan	Ciona
Ciona roulei	Chordata	0.2	mixed	0.03238	Marine	Obligatory outcrossing	Narrow endemic	Ciona
Ciona savignyi	Chordata	0.15	4-fold degenerate	0.0801	Marine	Obligatory outcrossing	Broad endemic	Ciona
Crassostrea gigas	Mollusca	NA	intronic	0.0333	Marine	Partial selfing	Broad endemic	Crassostrea
Crassostrea gigas	Mollusca	NA	synonymous	0.03306	Marine	Partial selfing	Broad endemic	Crassostrea
Cryptococcus neoformans	Basidiomycota	NA	mixed	0.00517575	Terrestrial	Partial selfing	Cosmopolitan	Cryptococcus
Cryptomeria japonica	Pinophyta	NA	intronic	0.00619	Terrestrial	Partial selfing	Cosmopolitan	Cryptomeria
Cryptomeria japonica	Pinophyta	NA	synonymous	0.00421	Terrestrial	Partial selfing	Cosmopolitan	Cryptomeria
Daphnia arenata	Arthropoda	0.002	intronic	0.00248	Freshwater	Partial selfing	Narrow endemic	Daphnia
Daphnia arenata	Arthropoda	0.002	synonymous	0.00172	Freshwater	Partial selfing	Narrow endemic	Daphnia
Daphnia magna	Arthropoda	0.002	non-coding	0.011279999999999998	Freshwater	Partial selfing	Cosmopolitan	Daphnia
Daphnia magna	Arthropoda	0.002	synonymous	0.01508	Freshwater	Partial selfing	Cosmopolitan	Daphnia
Daphnia obtusa	Arthropoda	0.002	intronic	0.014150000000000001	Freshwater	Selfing	Broad endemic	Daphnia
Daphnia obtusa	Arthropoda	0.002	synonymous	0.00938	Freshwater	Selfing	Broad endemic	Daphnia
Daphnia pulex	Arthropoda	0.002	synonymous	0.022029999999999998	Freshwater	Partial selfing	Cosmopolitan	Daphnia
Daphnia pulicaria	Arthropoda	0.002	intronic	0.02458	Freshwater	Partial selfing	Narrow endemic	Daphnia
Daphnia pulicaria	Arthropoda	0.002	synonymous	0.01587	Freshwater	Partial selfing	Narrow endemic	Daphnia
Dasypus novemcinctus	Chordata	0.7	synonymous	0.00153	Terrestrial	Obligatory outcrossing	Broad endemic	Dasypus
Daubentonia madagascariensis	Chordata	0.4064	synonymous	7.3e-4	Terrestrial	Obligatory outcrossing	Island	Daubentonia
Drosophila americana	Arthropoda	0.00265	intronic	0.01786	Terrestrial	Obligatory outcrossing	Broad endemic	Drosophila
Drosophila americana	Arthropoda	0.00265	synonymous	0.0252	Terrestrial	Obligatory outcrossing	Broad endemic	Drosophila
Drosophila ananassae	Arthropoda	0.00265	synonymous	0.0236	Terrestrial	Partial selfing	Cosmopolitan	Drosophila
Drosophila arizonae	Arthropoda	0.00265	mixed	0.008285	Terrestrial	Obligatory outcrossing	Broad endemic	Drosophila
Drosophila bipectinata	Arthropoda	0.00265	non-coding	0.020099999999999996	Terrestrial	Obligatory outcrossing	Broad endemic	Drosophila
Drosophila bogotana	Arthropoda	0.00265	non-coding	0.00622	Terrestrial	Obligatory outcrossing	Narrow endemic	Drosophila
Drosophila buzzatii	Arthropoda	0.00265	anonymous	0.01936	Terrestrial	Obligatory outcrossing	Cosmopolitan	Drosophila
Drosophila kikkawai	Arthropoda	0.00265	silent	0.0323	Terrestrial	Obligatory outcrossing	Cosmopolitan	Drosophila
Drosophila malerkotliana	Arthropoda	0.00265	non-coding	0.0168	Terrestrial	Obligatory outcrossing	Broad endemic	Drosophila
Drosophila melanogaster	Arthropoda	0.0025	non-coding	0.0172	Terrestrial	Obligatory outcrossing	Cosmopolitan	Drosophila
Drosophila melanogaster	Arthropoda	0.0025	synonymous	0.0232	Terrestrial	Obligatory outcrossing	Cosmopolitan	Drosophila
Drosophila miranda	Arthropoda	0.00295	intronic	0.0037	Terrestrial	Obligatory outcrossing	Narrow endemic	Drosophila
Drosophila miranda	Arthropoda	0.00295	non-coding	0.0036	Terrestrial	Obligatory outcrossing	Narrow endemic	Drosophila
Drosophila miranda	Arthropoda	0.00295	synonymous	0.00597	Terrestrial	Obligatory outcrossing	Narrow endemic	Drosophila
Drosophila mojavensis	Arthropoda	0.00265	mixed	0.00781	Terrestrial	Obligatory outcrossing	Narrow endemic	Drosophila
Drosophila navojoa	Arthropoda	0.00265	mixed	0.00804	Terrestrial	Obligatory outcrossing	Narrow endemic	Drosophila
Drosophila novamexicana	Arthropoda	0.00265	non-coding	0.00202	Terrestrial	Obligatory outcrossing	Narrow endemic	Drosophila
Drosophila parabipectinata	Arthropoda	0.00265	non-coding	0.013300000000000001	Terrestrial	Obligatory outcrossing	Broad endemic	Drosophila
Drosophila persimilis	Arthropoda	0.00265	non-coding	0.00777	Terrestrial	Obligatory outcrossing	Narrow endemic	Drosophila
Drosophila pseudoananassae	Arthropoda	0.00265	non-coding	0.018340000000000002	Terrestrial	Obligatory outcrossing	Broad endemic	Drosophila
Drosophila pseudoobscura	Arthropoda	0.0026	intronic	0.012	Terrestrial	Obligatory outcrossing	Broad endemic	Drosophila
Drosophila pseudoobscura	Arthropoda	0.0026	non-coding	0.011000000000000001	Terrestrial	Obligatory outcrossing	Broad endemic	Drosophila
Drosophila pseudoobscura	Arthropoda	0.0026	synonymous	0.02265	Terrestrial	Obligatory outcrossing	Broad endemic	Drosophila
Drosophila sechellia	Arthropoda	0.00265	silent	9.6e-4	Terrestrial	Obligatory outcrossing	Island	Drosophila
Drosophila simulans	Arthropoda	0.0025	intronic	0.0212	Terrestrial	Obligatory outcrossing	Cosmopolitan	Drosophila
Drosophila simulans	Arthropoda	0.0025	non-coding	0.0204	Terrestrial	Obligatory outcrossing	Cosmopolitan	Drosophila
Drosophila simulans	Arthropoda	0.0025	synonymous	0.0352	Terrestrial	Obligatory outcrossing	Cosmopolitan	Drosophila
Drosophila subobscura	Arthropoda	0.00265	silent	0.00988	Terrestrial	Obligatory outcrossing	Cosmopolitan	Drosophila
Eichhornia paniculata	Magnoliophyta	NA	silent	0.001396	Freshwater	Partial selfing	Broad endemic	Eichhornia
Eschrichtius robustus	Chordata	11.8872	intronic	0.00117	Marine	Obligatory outcrossing	Broad endemic	Eschrichtius
Eulemur coronatus	Chordata	0.3556	synonymous	0.0028100000000000004	Terrestrial	Obligatory outcrossing	Island	Eulemur
Eulemur mongoz	Chordata	0.82296	synonymous	0.00244	Terrestrial	Obligatory outcrossing	Island	Eulemur
Ficedula albicollis	Chordata	0.1275	intronic	0.0038	Terrestrial	Obligatory outcrossing	Broad endemic	Ficedula
Ficedula hypoleuca	Chordata	0.12954	intronic	0.0031	Terrestrial	Obligatory outcrossing	Broad endemic	Ficedula
Galago moholi	Chordata	0.3683	synonymous	0.0020399999999999997	Terrestrial	Obligatory outcrossing	Broad endemic	Galago
Gasterosteus aculeatus	Chordata	NA	genome-wide	0.002328	Marine and freshwater	Obligatory outcrossing	Cosmopolitan	Gasterosteus
Gorilla beringei/gorilla	Chordata	1.675	non-coding	0.0011915	Terrestrial	Obligatory outcrossing	Narrow endemic	Gorilla
Gryllus firmus	Arthropoda	0.0058	intronic	0.00889	Terrestrial	Obligatory outcrossing	Broad endemic	Gryllus
Gryllus pennsylvanicus	Arthropoda	0.022	intronic	0.00928	Terrestrial	Obligatory outcrossing	Broad endemic	Gryllus
Gulo gulo	Chordata	0.86	intronic	2.9e-4	Terrestrial	Obligatory outcrossing	Broad endemic	Gulo
Heliconius cydno	Arthropoda	0.0405	mixed	0.024249999999999997	Terrestrial	Obligatory outcrossing	Broad endemic	Heliconius
Heliconius hecale	Arthropoda	0.018	mixed	0.02106	Terrestrial	Obligatory outcrossing	Broad endemic	Heliconius
Heliconius melpomene	Arthropoda	NA	mixed	0.01996	Terrestrial	Obligatory outcrossing	Broad endemic	Heliconius
Heliconius pachinus	Arthropoda	0.0375	mixed	0.01881	Terrestrial	Obligatory outcrossing	Narrow endemic	Heliconius
Histoplasma capsulatum	Ascomycota	NA	mixed	0.021949999999999997	NA	Partial selfing	Cosmopolitan	Histoplasma
Homo sapiens	Chordata	1.64592	non-coding	0.0010666666666666667	Terrestrial	Obligatory outcrossing	Cosmopolitan	Homo
Homo sapiens	Chordata	1.64592	synonymous	0.0011899999999999999	Terrestrial	Obligatory outcrossing	Cosmopolitan	Homo
Hoolock leuconedys	Chordata	0.75	unclear	0.0021	Terrestrial	Obligatory outcrossing	Narrow endemic	Hoolock
Hylobates agilis/lar/moloch/pileatus	Chordata	0.5375	unclear	0.0025525	Terrestrial	Obligatory outcrossing	Broad endemic	Hylobates
Ixodes ricinus	Arthropoda	0.011	mixed	0.0087	Terrestrial	Obligatory outcrossing	Broad endemic	Ixodes
Limenitis arthemis	Arthropoda	0.079	anonymous	0.014280000000000001	Terrestrial	Obligatory outcrossing	Broad endemic	Limenitis
Lutzomyia intermedia	Arthropoda	0.003	mixed	0.01165	Terrestrial	Obligatory outcrossing	Broad endemic	Lutzomyia
Lutzomyia whitmani	Arthropoda	0.003	mixed	0.01592	Terrestrial	Obligatory outcrossing	Broad endemic	Lutzomyia
Lynx lynx	Chordata	0.87	intronic	1.03e-4	Terrestrial	Obligatory outcrossing	Broad endemic	Lynx
Macaca mulatta	Chordata	0.50038	synonymous	0.0028799999999999997	Terrestrial	Obligatory outcrossing	Broad endemic	Macaca
Malurus melanocephalus	Chordata	0.115	anonymous	0.015	Terrestrial	Obligatory outcrossing	Broad endemic	Malurus
Malurus melanocephalus	Chordata	0.115	intronic	0.009000000000000001	Terrestrial	Obligatory outcrossing	Broad endemic	Malurus
Melanoplus oregonensis	Arthropoda	0.03125	anonymous	0.00935	Terrestrial	Obligatory outcrossing	Narrow endemic	Melanoplus
Mesobuthus cyprius/gibbosus	Arthropoda	0.06	mixed	0.0125172	Terrestrial	Obligatory outcrossing	Broad endemic	Mesobuthus
Monodelphis domestica	Chordata	0.14732	synonymous	0.00164	Terrestrial	Obligatory outcrossing	Broad endemic	Monodelphis
Mus musculus	Chordata	0.0875	intronic	0.0033766666666666667	Terrestrial	Obligatory outcrossing	Broad endemic	Mus
Mus musculus	Chordata	0.0875	non-coding	0.0035	Terrestrial	Obligatory outcrossing	Broad endemic	Mus
Mus musculus	Chordata	0.0875	synonymous	0.0055899999999999995	Terrestrial	Obligatory outcrossing	Broad endemic	Mus
Nasonia vitripennis	Arthropoda	0.003	silent	0.0016	Terrestrial	Obligatory outcrossing	Cosmopolitan	Nasonia
Neurospora crassa	Ascomycota	NA	genome-wide	0.0023499999999999997	Terrestrial	Partial selfing	Cosmopolitan	Neurospora
Nomascus gabriellae/leucogenys	Chordata	0.7	unclear	0.002385	Terrestrial	Obligatory outcrossing	Narrow endemic	Nomascus
Nycticebus coucang	Chordata	0.3048	synonymous	0.00214	Terrestrial	Obligatory outcrossing	Broad endemic	Nycticebus
Oncorhynchus tshawytscha	Chordata	NA	synonymous	0.0026075	Marine and freshwater	Obligatory outcrossing	Broad endemic	Oncorhynchus
Oryctolagus cuniculus	Chordata	NA	silent	0.00843	Terrestrial	Obligatory outcrossing	Broad endemic	Oryctolagus
Pan paniscus	Chordata	0.762	non-coding	0.001	Terrestrial	Obligatory outcrossing	Narrow endemic	Pan
Pan troglodytes	Chordata	0.79248	non-coding	0.0014666666666666667	Terrestrial	Obligatory outcrossing	Broad endemic	Pan
Pan troglodytes	Chordata	0.79248	synonymous	0.0020599999999999998	Terrestrial	Obligatory outcrossing	Broad endemic	Pan
Papilio dardanus	Arthropoda	0.075	mixed	0.017	Terrestrial	Obligatory outcrossing	Broad endemic	Papilio
Paracoccidioides brasiliensis PS2/PS3/S1	Ascomycota	NA	mixed	0.00189	NA	Partial selfing	Broad endemic	Paracoccidioides
Paracoccidioides lutzii	Ascomycota	NA	mixed	0.01695	NA	Partial selfing	Broad endemic	Paracoccidioides
Paramecium biaurelia	Ciliophora	1.5e-4	synonymous	0.0038	Freshwater	Partial selfing	Unknown	Paramecium
Paramecium decaurelia	Ciliophora	1.2e-4	synonymous	0.0104	Freshwater	Partial selfing	Unknown	Paramecium
Paramecium dodecaurelia	Ciliophora	1.2e-4	synonymous	0.0078000000000000005	Freshwater	Partial selfing	Unknown	Paramecium
Paramecium novaurelia	Ciliophora	1.275e-4	synonymous	0.0091	Freshwater	Partial selfing	Unknown	Paramecium
Paramecium octaurelia	Ciliophora	1.2e-4	synonymous	0.0036	Freshwater	Partial selfing	Unknown	Paramecium
Paramecium pentaurelia	Ciliophora	3.3e-4	synonymous	0.0017000000000000001	Freshwater	Partial selfing	Unknown	Paramecium
Paramecium primaurelia	Ciliophora	1.275e-4	synonymous	0.022799999999999997	Freshwater	Partial selfing	Unknown	Paramecium
Paramecium quadecaurelia	Ciliophora	1.275e-4	synonymous	0.0345	Freshwater	Partial selfing	Unknown	Paramecium
Paramecium septaurelia	Ciliophora	1.275e-4	synonymous	0.0034000000000000002	Freshwater	Partial selfing	Unknown	Paramecium
Paramecium sexaurelia	Ciliophora	1.275e-4	synonymous	0.0038	Freshwater	Partial selfing	Unknown	Paramecium
Paramecium tetraurelia	Ciliophora	1.275e-4	synonymous	0.0079	Freshwater	Partial selfing	Unknown	Paramecium
Paramecium triaurelia	Ciliophora	1.275e-4	synonymous	0.0066	Freshwater	Partial selfing	Unknown	Paramecium
Peromyscus maniculatus	Chordata	0.09652	silent	0.01313	Terrestrial	Obligatory outcrossing	Broad endemic	Peromyscus
Phlebotomus ariasi	Arthropoda	0.00225	mixed	0.004156111111111111	Terrestrial	Obligatory outcrossing	Broad endemic	Phlebotomus
Phytophthora capsici	Heterokontophyta	NA	mixed	0.00617	NA	Partial selfing	Cosmopolitan	Phytophthora
Phytophthora infestans	Heterokontophyta	NA	mixed	0.00115	NA	Partial selfing	Cosmopolitan	Phytophthora
Picea abies	Pinophyta	NA	silent	0.00709	Terrestrial	Partial selfing	Broad endemic	Picea
Picea breweriana	Pinophyta	30	silent	0.00201	Terrestrial	Partial selfing	Narrow endemic	Picea
Picea glauca	Pinophyta	21	silent	0.00905	Terrestrial	Partial selfing	Broad endemic	Picea
Picea mariana	Pinophyta	10	silent	0.00461	Terrestrial	Partial selfing	Broad endemic	Picea
Pieris rapae	Arthropoda	0.05	synonymous	0.020954999999999998	Terrestrial	Obligatory outcrossing	Cosmopolitan	Pieris
Pinus pinaster	Pinophyta	NA	non-coding	0.00244	Terrestrial	Partial selfing	Narrow endemic	Pinus
Pinus pinaster	Pinophyta	NA	synonymous	2.8000000000000003e-4	Terrestrial	Partial selfing	Narrow endemic	Pinus
Pinus radiata	Pinophyta	NA	non-coding	6.98e-4	Terrestrial	Partial selfing	Broad endemic	Pinus
Pinus radiata	Pinophyta	NA	synonymous	7.539999999999999e-4	Terrestrial	Partial selfing	Broad endemic	Pinus
Pinus sylvestris	Pinophyta	35	synonymous	0.005600000000000001	Terrestrial	Partial selfing	Broad endemic	Pinus
Pinus taeda	Pinophyta	NA	silent	0.00746	Terrestrial	Partial selfing	Broad endemic	Pinus
Plasmodium falciparum	Apicomplexa	NA	4-fold degenerate	0.00151	NA	Partial selfing	Cosmopolitan	Plasmodium
Plasmodium falciparum	Apicomplexa	NA	intronic	0.00148	NA	Partial selfing	Cosmopolitan	Plasmodium
Plasmodium falciparum	Apicomplexa	NA	non-coding	0.00126	NA	Partial selfing	Cosmopolitan	Plasmodium
Plasmodium vivax	Apicomplexa	NA	mixed	6.16e-4	NA	Partial selfing	Cosmopolitan	Plasmodium
Pongo abelii/pygmaeus	Chordata	0.82296	non-coding	0.0031	Terrestrial	Obligatory outcrossing	Island	Pongo
Populus balsamifera	Magnoliophyta	NA	intronic	0.0034999999999999996	Terrestrial	Obligatory outcrossing	Broad endemic	Populus
Populus balsamifera	Magnoliophyta	NA	synonymous	0.0045000000000000005	Terrestrial	Obligatory outcrossing	Broad endemic	Populus
Populus tremula	Magnoliophyta	NA	silent	0.01455	Terrestrial	Obligatory outcrossing	Broad endemic	Populus
Populus trichocarpa	Magnoliophyta	NA	silent	0.00449	Terrestrial	Obligatory outcrossing	Broad endemic	Populus
Propithecus coquereli	Chordata	0.46	synonymous	0.00681	Terrestrial	Obligatory outcrossing	Island	Propithecus
Saccharomyces cerevisiae	Ascomycota	NA	synonymous	0.0015133333333333335	Terrestrial	Partial selfing	Cosmopolitan	Saccharomyces
Saccharomyces paradoxus	Ascomycota	NA	synonymous	0.0027333333333333333	Terrestrial	Partial selfing	Cosmopolitan	Saccharomyces
Sceloporus undulatus	Chordata	NA	anonymous	0.00623	Terrestrial	Obligatory outcrossing	Broad endemic	Sceloporus
Silene latifolia	Magnoliophyta	NA	silent	0.0288	Terrestrial	Obligatory outcrossing	Broad endemic	Silene
Sistrurus catenatus	Chordata	0.68	anonymous	2.35e-4	Terrestrial	Obligatory outcrossing	Broad endemic	Sistrurus
Sistrurus catenatus	Chordata	0.68	intronic	3.88e-4	Terrestrial	Obligatory outcrossing	Broad endemic	Sistrurus
Spermophilus parryii	Chordata	0.39	anonymous	0.0025900000000000003	Terrestrial	Obligatory outcrossing	Broad endemic	Spermophilus
Strongylocentrotus droebachiensis	Echinodermata	0.05	mixed	0.014499999999999999	Marine	Obligatory outcrossing	Broad endemic	Strongylocentrotus
Strongylocentrotus pallidus	Echinodermata	0.08	mixed	0.02492	Marine	Obligatory outcrossing	Broad endemic	Strongylocentrotus
Strongylocentrotus purpuratus	Echinodermata	0.1	mixed	0.0169	Marine	Obligatory outcrossing	Broad endemic	Strongylocentrotus
Symphalangus syndactylus	Chordata	0.57912	unclear	0.00168	Terrestrial	Obligatory outcrossing	Narrow endemic	Symphalangus
Taeniopygia guttata	Chordata	0.10414	intronic	0.0055	Terrestrial	Obligatory outcrossing	Broad endemic	Taeniopygia
Taeniopygia guttata	Chordata	0.10414	non-coding	0.0066500000000000005	Terrestrial	Obligatory outcrossing	Broad endemic	Taeniopygia
Takifugu rubripes	Chordata	0.4	genome-wide	0.004	Marine	Obligatory outcrossing	Broad endemic	Takifugu
Tupaia belangeri	Chordata	0.17	synonymous	0.00532	Terrestrial	Obligatory outcrossing	Broad endemic	Tupaia
Varecia variegata variegata	Chordata	0.503	synonymous	0.00375	Terrestrial	Obligatory outcrossing	Island	Varecia
Volvox carteri	Chlorophyta	NA	intronic	0.00534	Freshwater	Partial selfing	Unknown	Volvox
Volvox carteri	Chlorophyta	NA	synonymous	0.00358	Freshwater	Partial selfing	Unknown	Volvox
Zonotrichia albicollis	Chordata	0.17018	silent	0.0066	Terrestrial	Obligatory outcrossing	Broad endemic	Zonotrichia
back to top