useDynLib(rstpm2, .registration=TRUE) exportClasses(stpm2,pstpm2,tvcCoxph,aft) export(stpm2, pstpm2, aft, gsm, cox.tvc, # experimental --- don't export? markov_msm, ratio_markov_msm, zeroModel, hrModel, aftModel, addModel, # stratifiedModel, markov_sde, hazFun, splineFun, standardise, incrVar, nsx, nsxD, "coef<-", eform, predictnl, coef, confint, predictnl.default, confint.predictnl, vuniroot, bhazard, smoothpwc, gsm_design) S3method(makepredictcall, nsx) S3method(makepredictcall, nsxD) S3method(predict, nsx) S3method(predict, nsxD) S3method(predict, formula) S3method(predictnl, default) S3method(predictnl, lm) S3method(print, predictnl) S3method(confint, predictnl) S3method(lines, stpm2) S3method(lines, pstpm2) S3method(eform, stpm2) S3method(eform, default) S3method(coef, stpm2) S3method(vcov, stpm2) S3method(coef, pstpm2) S3method(vcov, pstpm2) S3method(as.data.frame, markov_msm) S3method(as.data.frame, markov_sde) S3method(as.data.frame, markov_msm_diff) S3method(as.data.frame, markov_msm_ratio) S3method(vcov, markov_msm) S3method(standardise, markov_msm) S3method(standardise, markov_sde) S3method(print, markov_msm) S3method(plot, markov_msm) S3method(plot, markov_sde) S3method(subset, markov_msm) S3method(rbind, markov_msm) S3method(transform, markov_msm) S3method(nrow, markov_msm) S3method(diff, markov_msm) ## S3method(predict, zeroModel) ## S3method(coef, zeroModel) ## S3method(vcov, zeroModel) ## S3method(predict, hrModel) ## S3method(coef, hrModel) ## S3method(vcov, hrModel) ## S3method(predict, stratifiedModel) ## S3method(coef, stratifiedModel) ## S3method(vcov, stratifiedModel) ## All methods for imported generics: exportMethods(plot,predict,predictnl,coef,confint,summary,update,anova,vcov,formula, BIC,AIC,AICc,qAICc,simulate,residuals,lines,eform) importFrom(graphics,plot,lines,matplot,par,polygon,abline,matlines,box) importFrom(stats, quantile, lm, as.formula, coef, makepredictcall, na.fail, predict, contrasts,delete.response, get_all_vars, model.extract, model.frame, model.matrix, model.weights, na.pass, optimHess, pweibull, terms, terms.formula, .checkMFClasses, .getXlevels, pchisq, printCoefmat, anova, var, residuals, confint, qnorm, complete.cases, reformulate, simulate,splinefun, update.default,runif) importFrom(mgcv,gam,s) importFrom(Rcpp,sourceCpp) importFrom(deSolve,ode) import(bbmle,methods,survival,splines) importFrom(utils,str,head,tail)