https://github.com/KoslickiLab/WGSUniFrac
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Tip revision: 02e1849f4a611b8623bd449dbc8178ef785e68a9 authored by Wei Wei on 15 June 2022, 19:04:10 UTC
remove more unneeded files
Tip revision: 02e1849
get_invalid_nodes_GTDB_2.py
import taxunifrac as tu

def main():
    invalid_nodes = tu.get_nodes_without_complete_NCBI_lineage()
    with open('data/GTDB/invalid_nodes.txt', 'w+') as f:
        for node in invalid_nodes:
            f.write(node)
            f.write('\n')

if __name__ == '__main__':
    main()
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