https://github.com/KoslickiLab/WGSUniFrac
Tip revision: 02e1849f4a611b8623bd449dbc8178ef785e68a9 authored by Wei Wei on 15 June 2022, 19:04:10 UTC
remove more unneeded files
remove more unneeded files
Tip revision: 02e1849
get_invalid_nodes_GTDB_2.py
import taxunifrac as tu
def main():
invalid_nodes = tu.get_nodes_without_complete_NCBI_lineage()
with open('data/GTDB/invalid_nodes.txt', 'w+') as f:
for node in invalid_nodes:
f.write(node)
f.write('\n')
if __name__ == '__main__':
main()