git clone git@github.com:GeoscienceAustralia/PyRate.git
cd PyRate

cd C:/Users/sheec/Desktop/Projects/PyRate

# build PyRate package
cd /PyRate
pip install -r requirements-dev.txt
pip install -r requirements-test.txt
pip install pyproj==2.2.1
cd /PyRate && python3 setup.py install

# Run workflow
python pyrate/__main__.py  conv2tif -f  pyrate_gamma.conf
pyrate prepifg -f pyrate_gamma.conf
pyrate process -f pyrate_gamma.conf
pyrate merge -f pyrate_gamma.conf

# Build Sphinx docs
cd /PyRate/docs && make html

# Run tests
cd /PyRate
chmod 444 tests/test_data/small_test/tif/geo_070709-070813_unw.tif
cd /PyRate && python -m pytest tests/

# Random stuff
pip install tox
tox

# 64 failed, 236 passed, 1944 skipped

---------------------------------------
NCI

ssh xyz@gadi.nci.org.au

module unload git
module load git

cd ~

rm -rf PyRate
rm -rf PyRateVenv

git clone https://github.com/GeoscienceAustralia/PyRate.git -b test --single-branch
source PyRate/utils/load_modules.sh
python3 -m venv ~/PyRateVenv
source ~/PyRateVenv/bin/activate
cd ~/PyRate
pip install -r requirements-dev.txt
pip install -r requirements-test.txt
pip install -r requirements.txt

python setup.py install

cd ~/PyRate/pyrate
python main.py -v DEBUG conv2tif -f ~/PyRate/sample_data/input_parameters.conf
python main.py -v DEBUG prepifg  -f ~/PyRate/sample_data/input_parameters.conf
python main.py -v DEBUG process  -f ~/PyRate/sample_data/input_parameters.conf
python main.py -v DEBUG merge    -f ~/PyRate/sample_data/input_parameters.conf