# Copyright 2016 the GPflow authors. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # distributed under the License is distributed on an "AS IS" BASIS, # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. # See the License for the specific language governing permissions and # limitations under the License.from __future__ import print_function from __future__ import print_function import GPflow import tensorflow as tf import numpy as np import unittest class TestOptimize(unittest.TestCase): def setUp(self): tf.reset_default_graph() rng = np.random.RandomState(0) class Quadratic(GPflow.model.Model): def __init__(self): GPflow.model.Model.__init__(self) self.x = GPflow.param.Param(rng.randn(10)) def build_likelihood(self): return -tf.reduce_sum(tf.square(self.x)) self.m = Quadratic() def test_adam(self): o = tf.train.AdamOptimizer() self.m.optimize(o, maxiter=5000) self.assertTrue(self.m.x.value.max() < 1e-2) def test_lbfgsb(self): self.m.optimize(disp=False) self.assertTrue(self.m.x.value.max() < 1e-6) def test_feval_counter(self): self.m._compile() self.m.num_fevals = 0 for _ in range(10): self.m._objective(self.m.get_free_state()) self.assertTrue(self.m.num_fevals == 10) class TestNeedsRecompile(unittest.TestCase): def setUp(self): self.m = GPflow.model.Model() self.m.p = GPflow.param.Param(1.0) def test_fix(self): self.m._needs_recompile = False self.m.p.fixed = True self.assertTrue(self.m._needs_recompile) def test_replace_param(self): self.m._needs_recompile = False new_p = GPflow.param.Param(3.0) self.m.p = new_p self.assertTrue(self.m._needs_recompile) def test_set_prior(self): self.m._needs_recompile = False self.m.p.prior = GPflow.priors.Gaussian(0, 1) self.assertTrue(self.m._needs_recompile) def test_set_transform(self): self.m._needs_recompile = False self.m.p.transform = GPflow.transforms.Identity() self.assertTrue(self.m._needs_recompile) def test_replacement(self): m = GPflow.model.Model() m.p = GPflow.param.Parameterized() m.p.p = GPflow.param.Param(1.0) m._needs_recompile = False # replace Parameterized new_p = GPflow.param.Parameterized() new_p.p = GPflow.param.Param(1.0) m.p = new_p self.assertTrue(m._needs_recompile is True) class KeyboardRaiser: """ This wraps a function and makes it raise a KeyboardInterrupt after some number of calls """ def __init__(self, iters_to_raise, f): self.iters_to_raise, self.f = iters_to_raise, f self.count = 0 def __call__(self, *a, **kw): self.count += 1 if self.count >= self.iters_to_raise: raise KeyboardInterrupt return self.f(*a, **kw) class TestKeyboardCatching(unittest.TestCase): def setUp(self): tf.reset_default_graph() X = np.random.randn(1000, 3) Y = np.random.randn(1000, 3) Z = np.random.randn(100, 3) self.m = GPflow.sgpr.SGPR(X, Y, Z=Z, kern=GPflow.kernels.RBF(3)) def test_optimize_np(self): x0 = self.m.get_free_state() self.m._compile() self.m._objective = KeyboardRaiser(15, self.m._objective) self.m.optimize(disp=0, maxiter=10000, ftol=0, gtol=0) x1 = self.m.get_free_state() self.assertFalse(np.allclose(x0, x1)) def test_optimize_tf(self): x0 = self.m.get_free_state() callback = KeyboardRaiser(5, lambda x: None) o = tf.train.AdamOptimizer() self.m.optimize(o, maxiter=15, callback=callback) x1 = self.m.get_free_state() self.assertFalse(np.allclose(x0, x1)) class TestLikelihoodAutoflow(unittest.TestCase): def setUp(self): tf.reset_default_graph() X = np.random.randn(1000, 3) Y = np.random.randn(1000, 3) Z = np.random.randn(100, 3) self.m = GPflow.sgpr.SGPR(X, Y, Z=Z, kern=GPflow.kernels.RBF(3)) def test_lik_and_prior(self): l0 = self.m.compute_log_likelihood() p0 = self.m.compute_log_prior() self.m.kern.variance.prior = GPflow.priors.Gamma(1.4, 1.6) l1 = self.m.compute_log_likelihood() p1 = self.m.compute_log_prior() self.assertTrue(p0 == 0.0) self.assertFalse(p0 == p1) self.assertTrue(l0 == l1) class TestName(unittest.TestCase): def test_name(self): m = GPflow.model.Model(name='foo') assert m.name == 'foo' if __name__ == "__main__": unittest.main()