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To reference or cite the objects present in the Software Heritage archive, permalinks based on SoftWare Hash IDentifiers (SWHIDs) must be used.
Select below a type of object currently browsed in order to display its associated SWHID and permalink.

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swh:1:cnt:263f652b9df076b1852edd3edaec26532d90ba2c
Citations

This interface enables to generate software citations, provided that the root directory of browsed objects contains a citation.cff or codemeta.json file.
Select below a type of object currently browsed in order to generate citations for them.

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Generate software citation in BibTex format (requires biblatex-software package)
Generating citation ...
#' Plot ROC curve from a cutpointr object
#'
#' Given a \code{cutpointr} object this function plots the ROC curve(s)
#' per subgroup, if given.
#' @param x A cutpointr object.
#' @param display_cutpoint (logical) Whether or not to display the optimal
#' cutpoint as a dot on the ROC curve.
#' @param ... Additional arguments (unused).
#' @examples
#' opt_cut <- cutpointr(suicide, dsi, suicide)
#' plot_roc(opt_cut, display_cutpoint = FALSE)
#'
#' opt_cut_2groups <- cutpointr(suicide, dsi, suicide, gender)
#' plot_roc(opt_cut_2groups, display_cutpoint = TRUE)
#' @family cutpointr plotting functions
#' @export
plot_roc <- function(x, display_cutpoint = TRUE, ...) {

    stopifnot("cutpointr" %in% class(x))
    args <- list(...)
    predictor <- as.name(x$predictor[1])
    outcome <- as.name(x$outcome[1])

    if (!(has_column(x, "subgroup"))) {
        dts_roc <- "roc_curve"
        fll <- NULL
        clr <- NULL
        clr_roc <- NULL
        transparency <- 1
    } else {
        dts_roc <- c("roc_curve", "subgroup")
        fll <- "subgroup"
        clr <- "subgroup"
        clr_roc <- ~ subgroup
        transparency <- 0.6
    }

    if (!(has_column(x, "subgroup"))) {
        roc_title <- ggplot2::ggtitle("ROC curve")
    } else {
        roc_title <- ggplot2::ggtitle("ROC curve", "by class")
    }
    if (display_cutpoint) {
        optcut_coords <- apply(x, 1, function(r) {
            opt_ind <- get_opt_ind(roc_curve = r$roc_curve,
                                   oc = r$optimal_cutpoint,
                                   direction = r$direction)
            data.frame(tpr = r$roc_curve$tpr[opt_ind],
                       tnr = r$roc_curve$tnr[opt_ind])
        })
        optcut_coords <- do.call(rbind, optcut_coords)
    }
    res_unnested <- x %>%
        dplyr::select_(.dots = dts_roc) %>%
        tidyr::unnest_(unnest_cols = "roc_curve")
    roc <- ggplot2::ggplot(res_unnested,
                           ggplot2::aes_(x = ~ 1 - tnr, y = ~ tpr, color = clr_roc)) +
        ggplot2::geom_step() +
        roc_title +
        ggplot2::xlab("1 - Specificity") +
        ggplot2::ylab("Sensitivity") +
        ggplot2::theme(aspect.ratio = 1)
    if (display_cutpoint) {
        roc <- roc + ggplot2::geom_point(data = optcut_coords, color = "black")
    }
    return(roc)
}

Software Heritage — Copyright (C) 2015–2025, The Software Heritage developers. License: GNU AGPLv3+.
The source code of Software Heritage itself is available on our development forge.
The source code files archived by Software Heritage are available under their own copyright and licenses.
Terms of use: Archive access, API— Contact— JavaScript license information— Web API

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