OxFitterAmoebaPrivateNr2_test.cpp
/*!
* \file OxFitterAmoebaPrivateNr2_test.cpp
* \author Konrad Werys
* \date 2018/08/07
*/
#include "CmakeConfigForTomato.h"
#ifdef USE_PRIVATE_NR2
#include "gtest/gtest.h"
#include "OxTestData.h"
#include "OxFitterAmoebaPrivateNr2.h"
#include "OxFunctionsT1ThreeParam.h"
TEST(OxFitterAmoebaPrivateNr2, performFitting) {
typedef double TYPE;
char filePath [] = "testData/blood.yaml";
Ox::TestData<TYPE> testData(filePath);
int nSamples = testData.getNSamples();
TYPE params[3] = {100, 200, 1200};
Ox::FunctionsT1ThreeParam<TYPE> functionsObject;
functionsObject.setNSamples(nSamples);
functionsObject.setInvTimes(testData.getInvTimesPtr());
functionsObject.setSignal(testData.getSignalPtr());
Ox::FitterAmoebaPrivateNr2<TYPE> fitterAmoebaNr2;
fitterAmoebaNr2.setFunctionsT1(&functionsObject);
fitterAmoebaNr2.setParameters(params);
fitterAmoebaNr2.setVerbose(false);
fitterAmoebaNr2.setTrace(false);
fitterAmoebaNr2.performFitting();
EXPECT_NEAR(params[0], testData.getResultsMolli()[0], 1e-2);
EXPECT_NEAR(params[1], testData.getResultsMolli()[1], 1e-2);
EXPECT_NEAR(params[2], testData.getResultsMolli()[2], 1e-2);
}
TEST(OxFitterAmoebaPrivateNr2, copyConstructor) {
typedef double TYPE;
char filePath [] = "testData/blood.yaml";
Ox::TestData<TYPE> testData(filePath);
int nSamples = testData.getNSamples();
double params[3] = {100, 200, 1200};
Ox::FunctionsT1ThreeParam<TYPE> functionsObject;
functionsObject.setNSamples(nSamples);
functionsObject.setInvTimes(testData.getInvTimesPtr());
functionsObject.setSignal(testData.getSignalPtr());
Ox::FitterAmoebaPrivateNr2<TYPE> fitter;
fitter.setFunctionsT1(&functionsObject);
fitter.setMaxFunctionEvals(123);
fitter.setFTolerance(321);
fitter.setParameters(params);
// copy constructor
Ox::FitterAmoebaPrivateNr2<TYPE> fitterCopy = fitter;
// MaxFunctionEvals should be the same
EXPECT_EQ( fitterCopy.getMaxFunctionEvals(), fitter.getMaxFunctionEvals());
EXPECT_EQ( fitterCopy.getFTolerance(), fitter.getFTolerance());
// FunctionsT1 was not declared for the copy, so it should be empty
EXPECT_FALSE( fitterCopy.getFunctionsT1());
EXPECT_NE( fitterCopy.getFunctionsT1(), fitter.getFunctionsT1());
}
#endif // USE_PRIVATE_NR2