qsub -N generate_graphs -o generate_graphs.out -e generate_graphs.err -V generate_graphs.sh

mkdir exp_all_wgt_subset_6/log_folder
export LOG_FOLDER=exp_all_wgt_subset_6/log_folder
export MAP_FILE=exp_all_wgt_subset_6/id_to_file.csv
qsub -J 1-2 -N compute_spanner -o $LOG_FOLDER/compute_spanner.out -e $LOG_FOLDER/compute_spanner.err -V compute_mlst.sh

mkdir exp_all_wgt_subset_6/log_folder_subset
export LOG_FOLDER=exp_all_wgt_subset_6/log_folder_subset
export MAP_FILE=exp_all_wgt_subset_6/id_to_file_subset.csv
qsub -J 1-2 -N compute_spanner -o $LOG_FOLDER/compute_spanner.out -e $LOG_FOLDER/compute_spanner.err -V compute_mlst_apprx.sh

mkdir exp_all_wgt_subset_6/log_folder_local
export LOG_FOLDER=exp_all_wgt_subset_6/log_folder_local
export MAP_FILE=exp_all_wgt_subset_6/id_to_file_local.csv
qsub -J 1-2 -N compute_spanner -o $LOG_FOLDER/compute_spanner.out -e $LOG_FOLDER/compute_spanner.err -V compute_mlst.sh

mkdir exp_all_wgt_subset_6/log_folder_pairwise2W
export LOG_FOLDER=exp_all_wgt_subset_6/log_folder_pairwise2W
export MAP_FILE=exp_all_wgt_subset_6/id_to_file_pairwise2W.csv
qsub -J 1-2 -N compute_spanner -o $LOG_FOLDER/compute_spanner.out -e $LOG_FOLDER/compute_spanner.err -V compute_mlst_apprx.sh

mkdir exp_all_wgt_subset_6/log_folder_local4W
export LOG_FOLDER=exp_all_wgt_subset_6/log_folder_local4W
export MAP_FILE=exp_all_wgt_subset_6/id_to_file_local4W.csv
qsub -J 1-2 -N compute_spanner -o $LOG_FOLDER/compute_spanner.out -e $LOG_FOLDER/compute_spanner.err -V compute_mlst.sh

mkdir exp_all_wgt_subset_6/log_folder_pairwise4W
export LOG_FOLDER=exp_all_wgt_subset_6/log_folder_pairwise4W
export MAP_FILE=exp_all_wgt_subset_6/id_to_file_pairwise4W.csv
qsub -J 1-2 -N compute_spanner -o $LOG_FOLDER/compute_spanner.out -e $LOG_FOLDER/compute_spanner.err -V compute_mlst_apprx.sh

mkdir exp_all_wgt_subset_6/log_folder_global6W
export LOG_FOLDER=exp_all_wgt_subset_6/log_folder_global6W
export MAP_FILE=exp_all_wgt_subset_6/id_to_file_global6W.csv
qsub -J 1-2 -N compute_spanner -o $LOG_FOLDER/compute_spanner.out -e $LOG_FOLDER/compute_spanner.err -V compute_mlst.sh

mkdir exp_all_wgt_subset_6/log_folder_pairwise6W
export LOG_FOLDER=exp_all_wgt_subset_6/log_folder_pairwise6W
export MAP_FILE=exp_all_wgt_subset_6/id_to_file_pairwise6W.csv
qsub -J 1-2 -N compute_spanner -o $LOG_FOLDER/compute_spanner.out -e $LOG_FOLDER/compute_spanner.err -V compute_mlst_apprx.sh

zip -r exp_all_wgt_subset_6.zip exp_all_wgt_subset_6/
rm -rf exp_all_wgt_subset_6/
scp exp_all_wgt_subset_6.zip abureyanahmed@lectura.cs.arizona.edu:/home/abureyanahmed/Desktop/GD2018/