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113 | name: PyRate CI
on:
pull_request:
branches:
- 'master'
push:
branches:
- '**'
jobs:
build:
if: ${{ ! (contains(github.event.head_commit.message, 'ci skip') || contains(github.event.head_commit.message, 'skip ci'))}}
runs-on: ubuntu-18.04
name: Python ${{ matrix.python }}
strategy:
matrix:
include:
- build: 1
python-version: "3.7"
GDALVERSION: "3.0.2"
PROJVERSION: "6.2.1"
- build: 2
python-version: "3.7"
GDALVERSION: "3.0.4"
PROJVERSION: "6.1.1"
- build: 3
python-version: "3.8"
GDALVERSION: "3.0.4"
PROJVERSION: "6.1.1"
- build: 4
python-version: "3.9"
GDALVERSION: "3.0.4"
PROJVERSION: "6.3.2"
env:
PIP_WHEEL_DIR: "/home/runner/.cache/pip/wheels"
PIP_FIND_LINKS: "file:///home/runner/.cache/pip/wheels"
GDALINST: "/home/runner/gdalinstall"
GDALBUILD: "/home/runner/gdalbuild"
GDALVERSION: ${{ matrix.GDALVERSION }}
PROJINST: "/home/runner/gdalinstall"
PROJBUILD: "/home/runner/projbuild"
PROJVERSION: ${{ matrix.PROJVERSION }}
PYTHONVERSION: ${{ matrix.python-version }}
steps:
- uses: actions/checkout@v2
- name: Cache multiple paths
uses: actions/cache@v2
with:
path: |
/home/runner/gdalinstall
key: ${{ runner.os }}-cache-GDAL-${{ matrix.GDALVERSION }}-proj-${{ matrix.PROJVERSION }}
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python-version }}
- name: Common set up ${{ matrix.python-version }}
run: |
sudo apt update
sudo apt upgrade
python -m pip install -U pip wheel setuptools==58.0
- name: Install packages including openmpi
if: env.PYTHONVERSION != '3.9'
run: sudo apt install libhdf5-serial-dev libnetcdf13 libatlas-base-dev gfortran openmpi-bin libopenmpi-dev
- name: Install packages except openmpi libraries
if: env.PYTHONVERSION == '3.9'
run: sudo apt install libhdf5-serial-dev libnetcdf13 libatlas-base-dev gfortran
- name: Install proj ${{matrix.PROJVERSION}}
run: |
echo "PATH=$GDALINST/gdal-$GDALVERSION/bin:$PATH" >> $GITHUB_ENV
echo "LD_LIBRARY_PATH=$GDALINST/gdal-$GDALVERSION/lib:$LD_LIBRARY_PATH" >> $GITHUB_ENV
source ./scripts/ci_proj_install.sh
- name: Install GDAL ${{matrix.GDALVERSION}}
run: |
echo "GDAL_DATA=$GDALINST/gdal-$GDALVERSION/share/gdal" >> $GITHUB_ENV
echo "PROJ_LIB=$GDALINST/gdal-$GDALVERSION/share/proj" >> $GITHUB_ENV
echo "LDFLAGS=-L$GDALINST/gdal-$GDALVERSION/lib -Wl,-rpath,$GDALINST/gdal-$GDALVERSION/lib" >> $GITHUB_ENV
source ./scripts/ci_gdal_install.sh
- name: Python ${{ matrix.python-version }} with MPI
if: env.PYTHONVERSION != '3.9'
run: |
python setup.py install
rm -rf Py_Rate.egg-info # remove the local egg
echo "PYTHONPATH=$(pwd):$PYTHONPATH" >> $GITHUB_ENV
chmod 444 tests/test_data/small_test/tif/geo_070709-070813_unw.tif # makes the file readonly, used in a test
pip install -r requirements-dev.txt -r requirements-test.txt
- name: Python ${{ matrix.python-version }} without MPI
if: env.PYTHONVERSION == '3.9'
run: |
python setup.py install
rm -rf Py_Rate.egg-info # remove the local egg
echo "PYTHONPATH=$(pwd):$PYTHONPATH" >> $GITHUB_ENV
chmod 444 tests/test_data/small_test/tif/geo_070709-070813_unw.tif # makes the file readonly, used in a test
pip install -r requirements-test.txt
- name: Test Pyrate in Python ${{ matrix.python-version }} with MPI
if: env.PYTHONVERSION != '3.9'
run: |
pytest tests/ -m "slow"
mpirun -n 3 pytest tests/test_shared.py -k test_tiles_split -s
pytest --cov-config=.coveragerc --cov-report term-missing:skip-covered --cov=pyrate tests/ -m "not slow"
env:
OMP_NUM_THREADS: 1
- name: Test Pyrate in Python ${{ matrix.python-version }} without MPI
if: env.PYTHONVERSION == '3.9'
run: |
pytest tests/ -m "not mpi and slow"
pytest --cov-config=.coveragerc --cov-report term-missing:skip-covered --cov=pyrate tests/ -m "not slow and not mpi"
env:
OMP_NUM_THREADS: 1
|