Skip to main content
  • Home
  • Development
  • Documentation
  • Donate
  • Operational login
  • Browse the archive

swh logo
SoftwareHeritage
Software
Heritage
Archive
Features
  • Search

  • Downloads

  • Save code now

  • Add forge now

  • Help

swh:1:snp:6a0ac420dcf26f4ce7b9c8b5d3c5816f5620bd13
  • Code
  • Branches (20)
  • Releases (0)
    • Branches
    • Releases
    • HEAD
    • refs/heads/master
    • refs/tags/1.2.2
    • refs/tags/1.3.1
    • refs/tags/1.3.2
    • refs/tags/1.3.4
    • refs/tags/1.4.0
    • refs/tags/1.4.1
    • refs/tags/1.4.2
    • refs/tags/1.4.4
    • refs/tags/1.4.5
    • refs/tags/1.5.0
    • refs/tags/1.5.1
    • refs/tags/1.5.2
    • refs/tags/1.5.5
    • refs/tags/1.5.6
    • refs/tags/1.5.7
    • refs/tags/1.5.8
    • refs/tags/1.5.9
    • refs/tags/1.6.1
    • refs/tags/1.6.2
    No releases to show
  • 73c24f5
  • /
  • NEWS.md
Raw File Download

To reference or cite the objects present in the Software Heritage archive, permalinks based on SoftWare Hash IDentifiers (SWHIDs) must be used.
Select below a type of object currently browsed in order to display its associated SWHID and permalink.

  • content
  • directory
  • revision
  • snapshot
content badge
swh:1:cnt:3164bcfb6c7d5e7e656d277be033711bfa2e8816
directory badge
swh:1:dir:73c24f5f4ff581cfa787edb9c4ac86ed29e27c60
revision badge
swh:1:rev:4f6cced2730ffce02a21c60576beee964f690a74
snapshot badge
swh:1:snp:6a0ac420dcf26f4ce7b9c8b5d3c5816f5620bd13

This interface enables to generate software citations, provided that the root directory of browsed objects contains a citation.cff or codemeta.json file.
Select below a type of object currently browsed in order to generate citations for them.

  • content
  • directory
  • revision
  • snapshot
Generate software citation in BibTex format (requires biblatex-software package)
Generating citation ...
Generate software citation in BibTex format (requires biblatex-software package)
Generating citation ...
Generate software citation in BibTex format (requires biblatex-software package)
Generating citation ...
Generate software citation in BibTex format (requires biblatex-software package)
Generating citation ...
Tip revision: 4f6cced2730ffce02a21c60576beee964f690a74 authored by Mark Clements on 29 May 2018, 12:45:06 UTC
version 1.4.2
Tip revision: 4f6cced
NEWS.md
# rstpm2 1.4.2
    - Belatedly started the NEWS.md file
    - Update to bbmle (>= 1.0.20) required due to new export from that package
    - Possible breaking change: for the `predict()` functions for `stpm2` and `pstpm2`, the `keep.attributes` default has changed from `TRUE` to `FALSE`. Any code that used `predict()` and needs the `newdata` attributes should now add the `keep.attributes=TRUE` argument. The previous default was noisy.
	- Possible breaking change: the derivative of the design matrix with respect to time now defaults to being calculated using log(time); the old calculation can be found using `log.time.transform=TRUE`. This is expected to provide more accurate gradients, particularly for very small times. 
    - To this point, the following models are available: 
      + `stpm2`: parametric generalised survival models, possibly with clustered data (Gamma frailties and normal random effects), relative survival, robust standard errors, rich post-estimation and plots.
      + `pstpm2`: penalised generalised survival models, possibly with clustered data (Gamma frailties and normal random effects), relative survival, robust standard errors, rich post-estimation and plots.
      + `aft`: parametric accelerated failure time models, with more limited post-estimation and plots.
	- Links for the generalised survival models include log-log, -logit, -probit, -log and Aranda-Ordaz.
    - Post-estimation for `stpm2` and `pstpm2` includes:
	  + Conditional survival ("surv"), linear predictor ("link"), cumulative hazard ("cumhaz"), hazard ("hazard"), log hazard ("loghazard"), probability density function ("density"), failure ("fail"), hazard ratio ("hr"), survival difference ("sdiff"), hazard difference ("hdiff"), mean survival ("meansurv"), mean survival differences ("meansurvdiff"), mean hazard ratio ("meanhr"), odds ("odds"), odds ratio ("or"), restricted mean survival time ("rmst"), attributable fractions ("af")
	  + Marginal survival ("margsurv"), marginal hazard ("marghaz"), attributable fractions ("af"), mean survival ("meanmargsurv")

back to top

Software Heritage — Copyright (C) 2015–2025, The Software Heritage developers. License: GNU AGPLv3+.
The source code of Software Heritage itself is available on our development forge.
The source code files archived by Software Heritage are available under their own copyright and licenses.
Terms of use: Archive access, API— Content policy— Contact— JavaScript license information— Web API