\name{shapes-internal} \alias{distCholesky} \alias{distEuclidean} \alias{distLogEuclidean} \alias{distPowerEuclidean} \alias{distProcrustesFull} \alias{distProcrustesSizeShape} \alias{distRiemPennec} \alias{Enorm} \alias{estChol} \alias{estShapes} \alias{estEuclid} \alias{estLogEuclid} \alias{estPowerEuclid} \alias{estLogRiem2} \alias{distRiemannianLe} \alias{estCholesky} \alias{estRiemLe} \alias{estShape} \alias{estSS} \alias{Hessian2} \alias{iglogl} \alias{Lambdamin} \alias{nsa} \alias{protein} \alias{James} \alias{procWGPA1} \alias{rotate} \alias{bootstraptest} \alias{testmeanshapes.old} \alias{permutationtest2} \alias{Goodall} \alias{Hotelling} \alias{abind} \alias{tpsgrid.old} \alias{shaperw} \alias{BoxM} \alias{Goodall2D} \alias{Goodalltest} \alias{Hotelling2D} \alias{Hotelling2Djames} \alias{Hotellingtest} \alias{MGM} \alias{I2mat} \alias{TPSgrid} \alias{V} \alias{Vinv} \alias{Vmat} \alias{add} \alias{as.3d} \alias{banner1} \alias{banner4} \alias{bendingenergy} \alias{bgpa} \alias{bookstein.shpv} \alias{bookstein.shpv.complex} \alias{braincon.dat} \alias{brainscz.dat} \alias{cbevec} \alias{cbevectors} \alias{centroid.size} \alias{centroid.size.complex} \alias{centroid.size.mD} \alias{close1} \alias{cnt3} \alias{complextoreal} \alias{defh} \alias{defplotsize2} \alias{defplotsize3} \alias{del} \alias{dif} \alias{dif.old} \alias{dis} \alias{distcov} \alias{estcov} \alias{fJ} \alias{fcel} \alias{fcnt} \alias{fgpa} \alias{fgpa.rot} \alias{fgpa.singleiteration} \alias{fopa} \alias{fort.ROTATEANDREFLECT} \alias{fort.ROTATION} \alias{fort} \alias{fos} \alias{fos.REFLECT} \alias{ftrsq} \alias{full.procdist} \alias{genpower} \alias{goodall2d} \alias{goodalltest} \alias{graf} \alias{hotelling2d} \alias{hotellingtest} \alias{isodens} \alias{isologdens} \alias{isomle} \alias{isotropy.test} \alias{kendall.shpv} \alias{linegrid} \alias{loglikeiso} \alias{loglikeiso2} \alias{loneFone} \alias{mahpreshapedist} \alias{makearray} \alias{movie} \alias{msh} \alias{norm} \alias{objfuniso} \alias{oneFone} \alias{partial.procdist} \alias{partialwarpgrids} \alias{partialwarps} \alias{permutationtest} \alias{plot2rwscores} \alias{plot3Ddata} \alias{plot3Ddata.static} \alias{plot3Dmean} \alias{plot3Dpca} \alias{plotPDM} \alias{plotPDM2} \alias{plotPDM3} \alias{plotPDMbook} \alias{plotPDMnoaxis} \alias{plotPDMnoaxis3} \alias{plotpairscores} \alias{plotpca} \alias{plotpca3d} \alias{plotprinwarp} \alias{plotproc} \alias{plotrelwarp} \alias{plotshapes3d} \alias{plotshapestime3d} \alias{pointsPDMnoaxis3} \alias{prcomp1} \alias{preshape} \alias{preshape.mD} \alias{preshape.mat} \alias{preshapetoicon} \alias{prinwscoregrids} \alias{procdistreflect} \alias{procrustes2d} \alias{procrustesGPA} \alias{procrustesGPA.rot} \alias{procrustesgpa} \alias{project} \alias{read.array} \alias{read.in} \alias{realtocomplex} \alias{reassqpr} \alias{relwarps} \alias{rgpa} \alias{riemdist.complex} \alias{riemdist.mD} \alias{rotateaxes} \alias{schizo.dat} \alias{sgpa} \alias{sh} \alias{sigma} \alias{sim1} \alias{st} \alias{tanfigure} \alias{tanfigurefull} \alias{tanpreshape} \alias{tantofigure} \alias{tantofigurefull} \alias{tantopreshape} \alias{testshapes} \alias{vec1} \title{Internal function(s)} \description{Internal function(s)} \keyword{internal}