if (suppressPackageStartupMessages(require("bayestestR", quietly = TRUE)) && require("testthat")) { test_that("blavaan, all", { skip_if_not_installed("blavaan") skip_if_not_installed("lavaan") require(blavaan) data("PoliticalDemocracy", package = "lavaan") model <- " # latent variable definitions dem60 =~ y1 + a*y2 dem65 =~ y5 + a*y6 # regressions dem65 ~ dem60 # residual correlations y1 ~~ y5 " model2 <- " # latent variable definitions dem60 =~ y1 + a*y2 dem65 =~ y5 + a*y6 # regressions dem65 ~ 0*dem60 # residual correlations y1 ~~ 0*y5 " suppressWarnings(capture.output({ bfit <- blavaan::bsem(model, data = PoliticalDemocracy, n.chains = 1, burnin = 50, sample = 100 ) bfit2 <- blavaan::bsem(model2, data = PoliticalDemocracy, n.chains = 1, burnin = 50, sample = 100 ) })) x <- point_estimate(bfit, centrality = "all", dispersion = TRUE) expect_true(all(c("Median", "MAD", "Mean", "SD", "MAP", "Component") %in% colnames(x))) expect_equal(nrow(x), 14) x <- eti(bfit) expect_equal(nrow(x), 14) x <- hdi(bfit) expect_equal(nrow(x), 14) x <- p_direction(bfit) expect_equal(nrow(x), 14) x <- rope(bfit) expect_equal(nrow(x), 14) x <- p_rope(bfit) expect_equal(nrow(x), 14) x <- p_map(bfit) expect_equal(nrow(x), 14) x <- p_significance(bfit) expect_equal(nrow(x), 14) x <- equivalence_test(bfit) expect_equal(nrow(x), 14) x <- estimate_density(bfit) expect_equal(length(unique(x$Parameter)), 14) ## Bayes factors ---- x <- expect_warning(bayesfactor_models(bfit, bfit2)) expect_true(x$log_BF[2] < 0) bfit_prior <- unupdate(bfit) capture.output(x <- bayesfactor_parameters(bfit, prior = bfit_prior)) expect_equal(nrow(x), 14) x <- expect_warning(si(bfit, prior = bfit_prior)) expect_equal(nrow(x), 14) x <- expect_warning(weighted_posteriors(bfit, bfit2)) expect_equal(ncol(x), 14) ## Prior/posterior checks ---- suppressWarnings(x <- check_prior(bfit)) expect_equal(nrow(x), 13) x <- check_prior(bfit, simulate_priors = FALSE) expect_equal(nrow(x), 14) x <- diagnostic_posterior(bfit) expect_equal(nrow(x), 14) x <- simulate_prior(bfit) expect_equal(ncol(x), 13) # YES this is 13! We have two parameters with the same prior. x <- describe_prior(bfit) expect_equal(nrow(x), 13) # YES this is 13! We have two parameters with the same prior. x <- describe_posterior(bfit, test = "all") expect_equal(nrow(x), 14) }) }