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https://github.com/dmascali/mni2atlas
03 December 2025, 05:13:54 UTC
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  • HarvardOxford-Subcortical.xml
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Tip revision: d05afff7081ddade66afc39c28d76c8cda1d6d39 authored by dmascali on 01 April 2021, 21:33:26 UTC
use which to identify atlas' path
Tip revision: d05afff
HarvardOxford-Subcortical.xml
<?xml version="1.0" encoding="ISO-8859-1"?>
<atlas version="1.0">
  <header>
    <name>Harvard-Oxford Subcortical Structural Atlas</name>
    <shortname>HOSPA</shortname>
    <type>Probabilistic</type>
    <images>
      <imagefile>/HarvardOxford/HarvardOxford-sub-prob-2mm</imagefile>
      <summaryimagefile>/HarvardOxford/HarvardOxford-sub-maxprob-thr25-2mm</summaryimagefile>
    </images>
    <images>
      <imagefile>/HarvardOxford/HarvardOxford-sub-prob-1mm</imagefile>
      <summaryimagefile>/HarvardOxford/HarvardOxford-sub-maxprob-thr25-1mm</summaryimagefile>
    </images>
  </header>
  <data>
<label index="0" x="58" y="37" z="50">Left Cerebral White Matter</label>
<label index="1" x="70" y="63" z="35">Left Cerebral Cortex </label>
<label index="2" x="57" y="40" z="41">Left Lateral Ventricle</label>
<label index="3" x="51" y="51" z="39">Left Thalamus</label>
<label index="4" x="51" y="71" z="38">Left Caudate</label>
<label index="5" x="56" y="67" z="34">Left Putamen</label>
<label index="6" x="54" y="62" z="35">Left Pallidum</label>
<label index="7" x="44" y="49" z="18">Brain-Stem</label>
<label index="8" x="59" y="54" z="27">Left Hippocampus</label>
<label index="9" x="57" y="61" z="27">Left Amygdala</label>
<label index="10" x="50" y="70" z="33">Left Accumbens</label>
<label index="11" x="29" y="38" z="51">Right Cerebral White Matter</label>
<label index="12" x="25" y="42" z="61">Right Cerebral Cortex </label>
<label index="13" x="35" y="45" z="44">Right Lateral Ventricle</label>
<label index="14" x="38" y="51" z="39">Right Thalamus</label>
<label index="15" x="39" y="72" z="37">Right Caudate</label>
<label index="16" x="34" y="68" z="34">Right Putamen</label>
<label index="17" x="35" y="61" z="35">Right Pallidum</label>
<label index="18" x="31" y="57" z="25">Right Hippocampus</label>
<label index="19" x="32" y="63" z="25">Right Amygdala</label>
<label index="20" x="40" y="69" z="32">Right Accumbens</label>
  </data>
</atlas>

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