Skip to main content
  • Home
  • Development
  • Documentation
  • Donate
  • Operational login
  • Browse the archive

swh logo
SoftwareHeritage
Software
Heritage
Archive
Features
  • Search

  • Downloads

  • Save code now

  • Add forge now

  • Help

  • 463e2d6
  • /
  • man
  • /
  • autolink_html.Rd
Raw File Download

To reference or cite the objects present in the Software Heritage archive, permalinks based on SoftWare Hash IDentifiers (SWHIDs) must be used.
Select below a type of object currently browsed in order to display its associated SWHID and permalink.

  • content
  • directory
content badge
swh:1:cnt:55c001b047f19305c29243f6a1fd3f1be3af6fe6
directory badge
swh:1:dir:9598e1a76c12cbb6ba86c048169cee9324c35cc7

This interface enables to generate software citations, provided that the root directory of browsed objects contains a citation.cff or codemeta.json file.
Select below a type of object currently browsed in order to generate citations for them.

  • content
  • directory
Generate software citation in BibTex format (requires biblatex-software package)
Generating citation ...
Generate software citation in BibTex format (requires biblatex-software package)
Generating citation ...
autolink_html.Rd
% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/autolink_html.R
\name{autolink_html}
\alias{autolink_html}
\title{Automatically link references and articles in an HTML page}
\usage{
autolink_html(input, output = input, local_packages = character())
}
\arguments{
\item{input, output}{Input and output paths for HTML file}

\item{local_packages}{A named character vector providing relative paths
(value) to packages (name) that can be reached with relative links
from the target HTML document.}
}
\description{
The autolinker is built around two XPath expressions:
\itemize{
\item \verb{//pre[contains(@class, 'r')]}:
this finds all \verb{<div>}s with class \code{sourceCode} and \code{r}. The contents
must be syntax-highlighted using \href{http://pygments.org/}{pygments}.
(This is default in \code{\link[rmarkdown:html_document]{rmarkdown::html_document()}} when \code{theme = NULL}.)
\item \verb{.//code[count(*) = 0]}: this finds all \verb{<code>} that contain only
text (and no other tags).
}
}
\details{
Currently the following expressions are linked:
\itemize{
\item Function calls, \code{foo()}
\item Function calls qualified with the package name, \code{bar::foo()}
\item Symbols qualified with the package name, \code{bar::baz}
\item \code{library()}, \code{require()} and \code{requireNamespace()} calls.
\item Help calls, \code{?foo}, \code{package?foo}, \code{?bar::foo}, \code{help(foo)},
\code{help(foo, package = bar)}, \code{help(package = bar)}.
\item Vignette calls, \code{vignette(baz)}, \code{vignette(baz, package = "bar")}
}

Calls to \code{library()} and \code{require()} are used to find the topics connected
to unqualified references.
}
\examples{
\dontrun{
autolink_html("path/to/file.html",
  local_packages = c(
    shiny = "shiny",
    shinydashboard = "shinydashboard"
  )
)
}
}

back to top

Software Heritage — Copyright (C) 2015–2025, The Software Heritage developers. License: GNU AGPLv3+.
The source code of Software Heritage itself is available on our development forge.
The source code files archived by Software Heritage are available under their own copyright and licenses.
Terms of use: Archive access, API— Content policy— Contact— JavaScript license information— Web API