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https://github.com/blab/mumps-wa-phylodynamics
20 April 2021, 13:07:29 UTC
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Tip revision: 03472023d0a2c4cf89c490b889e31507054a5317 authored by Louise H Moncla on 08 October 2020, 00:05:57 UTC
adding in mtt output files
Tip revision: 0347202
README.md
# Structured coalescent analyses

These directories contain the input xml files and alignment files used for the multitype tree and mascot structured coalescent analyses. Due to identifiability issues, we are unable at this time to release metadata regarding the combination of vaccination status, Marshallese status, and age. As a result, I have gone through and replaced those variables in these xmls and alignment files with generic placeholder text like `community_status`. If we are able to get approval to release this metadata then I will re-populate those fields and upload the versions of the files with the actual metadata.

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