# Generated by roxygen2: do not edit by hand

export(FDR)
export(broken_stick)
export(check_study)
export(compute_survival_table)
export(coxres)
export(create_study)
export(discr)
export(download_gse_raw_tar)
export(epimed_api_update)
export(et_pairs)
export(fuse_exp_grp)
export(gdc_client_wrapper)
export(get_cel_filenames)
export(get_exprin_app)
export(get_fake_study)
export(get_gsm)
export(get_hm_app)
export(get_nbline)
export(get_tcga_exp_grp)
export(intersect_rec)
export(longest_common_prefix)
export(m2sd)
export(monitored_apply)
export(monitored_sapply)
export(overview)
export(perform_anova)
export(perform_anova_gen)
export(plot_bean_expr)
export(plot_hm)
export(plot_hm2)
export(plot_survival_panel)
export(plot_survival_panel_simple)
export(plot_survival_panel_simple2)
export(plot_volcano)
export(qc_expr)
export(revcomp)
export(scurve)
export(simplify_column_names)
export(simplify_exp_grp)
export(simplify_factor_names)
export(simplify_sample_names)
export(summarize_exp_grp)
export(tcga_explore_data)
export(tcga_fum_data)
export(tcga_merge_metadata_cart_and_clinicals)
exportClasses(Study_abstract)
import(methods)
importFrom(Biobase,exprs)
importFrom(GEOquery,Table)
importFrom(GEOquery,getGEO)
importFrom(GEOquery,getGEOSuppFiles)
importFrom(affy,justRMA)
importFrom(beanplot,beanplot)
importFrom(gplots,heatmap.2)
importFrom(grDevices,adjustcolor)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,rainbow)
importFrom(graphics,abline)
importFrom(graphics,axis)
importFrom(graphics,boxplot)
importFrom(graphics,hist)
importFrom(graphics,image)
importFrom(graphics,layout)
importFrom(graphics,legend)
importFrom(graphics,lines)
importFrom(graphics,pairs)
importFrom(graphics,par)
importFrom(graphics,plot)
importFrom(graphics,points)
importFrom(graphics,polygon)
importFrom(graphics,strwidth)
importFrom(graphics,text)
importFrom(gtools,foldchange2logratio)
importFrom(gtools,logratio2foldchange)
importFrom(httr,POST)
importFrom(jsonlite,fromJSON)
importFrom(memoise,memoise)
importFrom(nortest,ad.test)
importFrom(seqinr,comp)
importFrom(shiny,actionLink)
importFrom(shiny,checkboxGroupInput)
importFrom(shiny,checkboxInput)
importFrom(shiny,column)
importFrom(shiny,dataTableOutput)
importFrom(shiny,div)
importFrom(shiny,fluidPage)
importFrom(shiny,fluidRow)
importFrom(shiny,h3)
importFrom(shiny,h4)
importFrom(shiny,insertUI)
importFrom(shiny,numericInput)
importFrom(shiny,observe)
importFrom(shiny,plotOutput)
importFrom(shiny,radioButtons)
importFrom(shiny,reactiveValues)
importFrom(shiny,removeUI)
importFrom(shiny,renderDataTable)
importFrom(shiny,renderPlot)
importFrom(shiny,renderUI)
importFrom(shiny,selectInput)
importFrom(shiny,shinyApp)
importFrom(shiny,uiOutput)
importFrom(shiny,updateCheckboxGroupInput)
importFrom(stats,anova)
importFrom(stats,aov)
importFrom(stats,as.dendrogram)
importFrom(stats,as.formula)
importFrom(stats,cor)
importFrom(stats,cor.test)
importFrom(stats,cutree)
importFrom(stats,density)
importFrom(stats,dist)
importFrom(stats,hclust)
importFrom(stats,kernapply)
importFrom(stats,kernel)
importFrom(stats,lm)
importFrom(stats,na.omit)
importFrom(stats,p.adjust)
importFrom(stats,quantile)
importFrom(stats,residuals)
importFrom(stats,rnorm)
importFrom(stats,runif)
importFrom(stats,sd)
importFrom(stats,symnum)
importFrom(stats,t.test)
importFrom(survival,Surv)
importFrom(survival,cox.zph)
importFrom(survival,coxph)
importFrom(survival,survfit)
importFrom(utils,combn)
importFrom(utils,head)
importFrom(utils,read.table)