https://github.com/hongtaoh/32vis
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Tip revision: 7369347f01be67cf1389f2ebbf19bf9ffbc797e7 authored by Hongtao Hao on 28 April 2023, 02:39:24 UTC
Rename 2023-04-27-check-cited-papers-venues.ipynb to 2023-04-27-check-citing-papers-venues.ipynb
Tip revision: 7369347
environment.yml
name: 31vis
channels:
  - conda-forge/label/cf202003
  - anaconda
  - pytorch
  - bioconda
  - conda-forge
  - defaults
dependencies:
  - abseil-cpp=20200923.3=h23ab428_0
  - adjusttext=0.7.3.1=py_1
  - aiohttp=3.8.1=py38hca72f7f_1
  - aiosignal=1.2.0=pyhd3eb1b0_0
  - altair=4.2.0=pyhd8ed1ab_1
  - appnope=0.1.2=py38hecd8cb5_1001
  - argon2-cffi=21.3.0=pyhd3eb1b0_0
  - argon2-cffi-bindings=21.2.0=py38hca72f7f_0
  - arrow=1.1.1=py38hecd8cb5_0
  - astor=0.8.1=py38hecd8cb5_0
  - asttokens=2.0.5=pyhd3eb1b0_0
  - astunparse=1.6.3=py_0
  - async-timeout=4.0.1=pyhd3eb1b0_0
  - attrs=21.4.0=pyhd3eb1b0_0
  - backcall=0.2.0=pyhd3eb1b0_0
  - beautifulsoup4=4.10.0=pyh06a4308_0
  - bibtexparser=1.1.0=py_0
  - bioinfokit=2.0.8=pyh5e36f6f_0
  - blas=1.0=mkl
  - bleach=4.1.0=pyhd3eb1b0_0
  - blinker=1.4=py38hecd8cb5_0
  - bottleneck=1.3.2=py38hf1fa96c_1
  - brotli=1.0.9=hb1e8313_2
  - brotlipy=0.7.0=py38h9ed2024_1003
  - bzip2=1.0.8=h1de35cc_0
  - c-ares=1.18.1=hca72f7f_0
  - ca-certificates=2021.10.8=h033912b_0
  - cachetools=4.2.2=pyhd3eb1b0_0
  - certifi=2021.10.8=py38h50d1736_1
  - cffi=1.15.0=py38hc55c11b_1
  - charset-normalizer=2.0.4=pyhd3eb1b0_0
  - click=8.0.4=py38hecd8cb5_0
  - colorama=0.4.4=pyhd3eb1b0_0
  - coverage=6.3.2=py38hca72f7f_0
  - cryptography=3.4.8=py38h2fd3fbb_0
  - cycler=0.11.0=pyhd3eb1b0_0
  - cython=0.29.25=py38he9d5cce_0
  - dataclasses=0.8=pyh6d0b6a4_7
  - dbus=1.13.18=h18a8e69_0
  - debugpy=1.5.1=py38he9d5cce_0
  - decorator=5.1.1=pyhd3eb1b0_0
  - defusedxml=0.7.1=pyhd3eb1b0_0
  - deprecated=1.2.12=pyhd3eb1b0_0
  - descartes=1.1.0=py_4
  - entrypoints=0.3=py38_0
  - executing=0.8.3=pyhd3eb1b0_0
  - expat=2.4.4=he9d5cce_0
  - fake-useragent=0.1.11=pyhd8ed1ab_0
  - ffmpeg=4.3=h0a44026_0
  - fonttools=4.25.0=pyhd3eb1b0_0
  - free-proxy=1.0.5=pyhd8ed1ab_0
  - freetype=2.11.0=hd8bbffd_0
  - frozenlist=1.2.0=py38hca72f7f_0
  - future=0.18.2=py38_1
  - gast=0.3.3=py_0
  - gettext=0.21.0=h7535e17_0
  - giflib=5.2.1=haf1e3a3_0
  - glib=2.69.1=h8346a28_1
  - gmp=6.2.1=h23ab428_2
  - gnutls=3.6.15=hed9c0bf_0
  - google-auth=2.6.0=pyhd3eb1b0_0
  - google-auth-oauthlib=0.4.4=pyhd3eb1b0_0
  - google-pasta=0.2.0=pyhd3eb1b0_0
  - grpc-cpp=1.36.4=h33525da_1
  - grpcio=1.36.1=py38h97de6d8_1
  - h5py=2.10.0=py38h0601b69_1
  - hdf5=1.10.6=hdbbcd12_0
  - icu=58.2=h0a44026_3
  - idna=3.3=pyhd3eb1b0_0
  - importlib-metadata=4.8.2=py38hecd8cb5_0
  - importlib_metadata=4.8.2=hd3eb1b0_0
  - intel-openmp=2021.4.0=hecd8cb5_3538
  - ipykernel=6.9.1=py38hecd8cb5_0
  - ipython=8.1.1=py38hecd8cb5_0
  - ipython_genutils=0.2.0=pyhd3eb1b0_1
  - ipywidgets=7.6.5=pyhd3eb1b0_1
  - jedi=0.18.1=py38hecd8cb5_1
  - jinja2=3.0.3=pyhd3eb1b0_0
  - joblib=1.1.0=pyhd3eb1b0_0
  - jpeg=9d=h9ed2024_0
  - jsonschema=3.2.0=pyhd3eb1b0_2
  - jupyter=1.0.0=py38_7
  - jupyter_client=7.1.2=pyhd3eb1b0_0
  - jupyter_console=6.4.3=pyhd3eb1b0_0
  - jupyter_core=4.9.2=py38hecd8cb5_0
  - jupyterlab_pygments=0.1.2=py_0
  - jupyterlab_widgets=1.0.0=pyhd3eb1b0_1
  - keras-preprocessing=1.1.2=pyhd3eb1b0_0
  - kiwisolver=1.3.2=py38he9d5cce_0
  - krb5=1.19.2=hcd88c3b_0
  - lame=3.100=h1de35cc_0
  - lcms2=2.12=hf1fd2bf_0
  - libcurl=7.80.0=h6dfd666_0
  - libcxx=12.0.0=h2f01273_0
  - libedit=3.1.20210910=hca72f7f_0
  - libev=4.33=h9ed2024_1
  - libffi=3.3=hb1e8313_2
  - libgfortran=3.0.1=h93005f0_2
  - libiconv=1.16=h1de35cc_0
  - libidn2=2.3.2=h9ed2024_0
  - libnghttp2=1.46.0=ha29bfda_0
  - libpng=1.6.37=ha441bb4_0
  - libprotobuf=3.15.8=hcf210ce_1
  - libsodium=1.0.18=h1de35cc_0
  - libssh2=1.9.0=ha12b0ac_1
  - libtasn1=4.16.0=h9ed2024_0
  - libtiff=4.2.0=h87d7836_0
  - libunistring=0.9.10=h9ed2024_0
  - libuv=1.40.0=haf1e3a3_0
  - libwebp=1.2.2=h56c3ce4_0
  - libwebp-base=1.2.2=hca72f7f_0
  - libxml2=2.9.12=hcdb78fc_0
  - libxslt=1.1.34=h83b36ba_0
  - llvm-openmp=12.0.0=h0dcd299_1
  - lxml=4.8.0=py38h65b224f_0
  - lz4-c=1.9.3=h23ab428_1
  - markdown=3.3.4=py38hecd8cb5_0
  - markupsafe=2.0.1=py38h9ed2024_0
  - matplotlib=3.5.0=py38hecd8cb5_0
  - matplotlib-base=3.5.0=py38h4f681db_0
  - matplotlib-inline=0.1.2=pyhd3eb1b0_2
  - matplotlib-venn=0.11.6=pyh9f0ad1d_0
  - mistune=0.8.4=py38h1de35cc_1001
  - mizani=0.7.3=pyhd8ed1ab_0
  - mkl=2021.4.0=hecd8cb5_637
  - mkl-service=2.4.0=py38h9ed2024_0
  - mkl_fft=1.3.1=py38h4ab4a9b_0
  - mkl_random=1.2.2=py38hb2f4e1b_0
  - mpmath=1.2.1=py38hecd8cb5_0
  - multidict=5.2.0=py38hca72f7f_2
  - munkres=1.1.4=py_0
  - nbclient=0.5.11=pyhd3eb1b0_0
  - nbconvert=6.3.0=py38hecd8cb5_0
  - nbformat=5.1.3=pyhd3eb1b0_0
  - ncurses=6.3=hca72f7f_2
  - nest-asyncio=1.5.1=pyhd3eb1b0_0
  - nettle=3.7.3=h230ac6f_1
  - nltk=3.5=py_0
  - notebook=6.4.8=py38hecd8cb5_0
  - numexpr=2.8.1=py38h2e5f0a9_0
  - numpy=1.21.2=py38h4b4dc7a_0
  - numpy-base=1.21.2=py38he0bd621_0
  - oauthlib=3.2.0=pyhd3eb1b0_0
  - openh264=2.1.1=h8346a28_0
  - openssl=1.1.1n=h6c3fc93_0
  - opt_einsum=3.3.0=pyhd3eb1b0_1
  - packaging=21.3=pyhd3eb1b0_0
  - palettable=3.3.0=py_0
  - pandas=1.3.4=py38h743cdd8_0
  - pandocfilters=1.5.0=pyhd3eb1b0_0
  - parso=0.8.3=pyhd3eb1b0_0
  - patsy=0.5.2=py38hecd8cb5_1
  - pcre=8.45=h23ab428_0
  - pexpect=4.8.0=pyhd3eb1b0_3
  - pickleshare=0.7.5=pyhd3eb1b0_1003
  - pillow=9.0.1=py38hde71d04_0
  - pip=21.2.4=py38hecd8cb5_0
  - plotnine=0.6.0=py_0
  - powerlaw=1.4.6=pyh9f0ad1d_1
  - prometheus_client=0.13.1=pyhd3eb1b0_0
  - prompt-toolkit=3.0.20=pyhd3eb1b0_0
  - prompt_toolkit=3.0.20=hd3eb1b0_0
  - protobuf=3.15.8=py38ha048514_0
  - ptyprocess=0.7.0=pyhd3eb1b0_2
  - pure_eval=0.2.2=pyhd3eb1b0_0
  - pyasn1=0.4.8=pyhd3eb1b0_0
  - pyasn1-modules=0.2.8=py_0
  - pycparser=2.21=pyhd3eb1b0_0
  - pygments=2.11.2=pyhd3eb1b0_0
  - pyjwt=2.1.0=py38hecd8cb5_0
  - pyopenssl=21.0.0=pyhd3eb1b0_1
  - pyparsing=3.0.4=pyhd3eb1b0_0
  - pyqt=5.9.2=py38h655552a_2
  - pyrsistent=0.18.0=py38hca72f7f_0
  - pysocks=1.7.1=py38_1
  - python=3.8.12=h88f2d9e_0
  - python-dateutil=2.8.2=pyhd3eb1b0_0
  - python-dotenv=0.19.2=pyhd8ed1ab_0
  - python_abi=3.8=2_cp38
  - pytorch=1.11.0=py3.8_0
  - pytz=2021.3=pyhd3eb1b0_0
  - pyzmq=22.3.0=py38he9d5cce_2
  - qt=5.9.7=h468cd18_1
  - qtconsole=5.2.2=pyhd3eb1b0_0
  - qtpy=1.11.2=pyhd3eb1b0_0
  - re2=2021.04.01=he49afe7_0
  - readline=8.1.2=hca72f7f_1
  - regex=2021.11.2=py38hca72f7f_0
  - requests-oauthlib=1.3.0=py_0
  - rsa=4.7.2=pyhd3eb1b0_1
  - scholarly=1.5.1=pyhd8ed1ab_0
  - scikit-learn=1.0.2=py38hae1ba45_1
  - seaborn=0.11.2=pyhd3eb1b0_0
  - selenium=3.141.0=py38h96a0964_1003
  - send2trash=1.8.0=pyhd3eb1b0_1
  - setuptools=58.0.4=py38hecd8cb5_0
  - sip=4.19.8=py38h0a44026_0
  - six=1.16.0=pyhd3eb1b0_1
  - snappy=1.1.8=hb1e8313_0
  - soupsieve=2.3.1=pyhd3eb1b0_0
  - sphinx_rtd_theme=0.4.3=pyhd3eb1b0_0
  - sqlite=3.37.2=h707629a_0
  - stack_data=0.2.0=pyhd3eb1b0_0
  - tensorboard-plugin-wit=1.6.0=py_0
  - termcolor=1.1.0=py38hecd8cb5_1
  - terminado=0.13.1=py38hecd8cb5_0
  - testpath=0.5.0=pyhd3eb1b0_0
  - textwrap3=0.9.2=py_0
  - threadpoolctl=2.2.0=pyh0d69192_0
  - tk=8.6.11=h7bc2e8c_0
  - toolz=0.11.2=pyhd8ed1ab_0
  - torchvision=0.12.0=py38_cpu
  - tornado=6.1=py38h9ed2024_0
  - traitlets=5.1.1=pyhd3eb1b0_0
  - typing-extensions=3.10.0.2=hd3eb1b0_0
  - typing_extensions=3.10.0.2=pyh06a4308_0
  - unidecode=1.3.3=pyhd8ed1ab_0
  - urllib3=1.26.8=pyhd8ed1ab_1
  - wcwidth=0.2.5=pyhd3eb1b0_0
  - webencodings=0.5.1=py38_1
  - werkzeug=2.0.3=pyhd3eb1b0_0
  - wheel=0.37.1=pyhd3eb1b0_0
  - widgetsnbextension=3.5.2=py38hecd8cb5_0
  - wrapt=1.13.3=py38hca72f7f_2
  - xz=5.2.5=h1de35cc_0
  - yarl=1.6.3=py38h9ed2024_0
  - zeromq=4.3.4=h23ab428_0
  - zipp=3.7.0=pyhd3eb1b0_0
  - zlib=1.2.11=h4dc903c_4
  - zstd=1.4.9=h322a384_0
  - pip:
    - absl-py==1.1.0
    - affinegap==1.12
    - altair-data-server==0.4.1
    - altair-saver==0.5.0
    - altair-viewer==0.4.0
    - appdirs==1.4.4
    - blis==0.7.7
    - branca==0.4.2
    - cairocffi==1.3.0
    - cairosvg==2.5.2
    - catalogue==2.0.7
    - configargparse==1.5.3
    - connection-pool==0.0.3
    - crossrefapi==1.5.0
    - cssselect2==0.5.0
    - cymem==2.0.6
    - d6tcollect==1.0.6
    - d6tjoin==0.2.1
    - d6tstack==0.2.0
    - datrie==0.8
    - docutils==0.18.1
    - filelock==3.4.2
    - flatbuffers==1.12
    - folium==0.12.1.post1
    - gender==0.0.30
    - genderize==0.3.1
    - geographiclib==1.52
    - geopy==2.2.0
    - gitdb==4.0.9
    - gitpython==3.1.24
    - google-search-results==2.4.1
    - greenlet==1.1.2
    - habanero==1.0.0
    - html5lib==1.1
    - huggingface-hub==0.4.0
    - iniconfig==1.1.1
    - install==1.3.5
    - jellyfish==0.9.0
    - keras==2.9.0
    - langcodes==3.3.0
    - libclang==14.0.1
    - murmurhash==1.0.6
    - networkx==2.7.1
    - pathy==0.6.1
    - pluggy==1.0.0
    - portpicker==1.5.0
    - pprintpp==0.4.0
    - preshed==3.0.6
    - psutil==5.9.0
    - pulp==2.6.0
    - py==1.11.0
    - pycountry==22.3.5
    - pycountry-convert==0.7.2
    - pydantic==1.8.2
    - pytest==7.1.1
    - pytest-cov==3.0.0
    - pytest-mock==3.7.0
    - pyyaml==6.0
    - ratelimiter==1.2.0.post0
    - reportlab==3.6.9
    - repoze-lru==0.7
    - requests==2.27.0
    - sacremoses==0.0.49
    - scipy==1.8.0
    - skorch==0.11.0
    - smart-open==5.2.1
    - smmap==5.0.0
    - snakemake==6.12.3
    - spacy==3.2.4
    - spacy-legacy==3.0.9
    - spacy-loggers==1.0.1
    - sqlalchemy==1.4.31
    - srsly==2.4.2
    - statsmodels==0.13.2
    - stopit==1.1.2
    - svglib==1.2.1
    - tabulate==0.8.9
    - tensorboard==2.9.1
    - tensorboard-data-server==0.6.1
    - tensorflow==2.9.1
    - tensorflow-estimator==2.9.0
    - tensorflow-io-gcs-filesystem==0.26.0
    - thinc==8.0.15
    - tinycss2==1.1.1
    - tokenizers==0.11.6
    - tomli==2.0.1
    - toposort==1.7
    - torchtext==0.12.0
    - tqdm==4.62.3
    - transformers==4.17.0
    - typer==0.4.0
    - vega-datasets==0.9.0
    - wasabi==0.9.0
prefix: /opt/anaconda3/envs/31vis
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