"""Tests for MS object.""" import nose.tools as nt import os import copy import numpy as np from pyuvdata import UVData from pyuvdata.data import DATA_PATH import pyuvdata.tests as uvtest from pyuvdata import UVFITS def test_cotter_ms(): """Test reading in an ms made from MWA data with cotter (no dysco compression)""" UV = UVData() testfile = os.path.join(DATA_PATH, '1102865728_small.ms') UV.read_ms(testfile) del(UV) def test_readNRAO(): """Test reading in a CASA tutorial ms file.""" UV = UVData() testfile = os.path.join(DATA_PATH, 'day2_TDEM0003_10s_norx_1src_1spw.ms') expected_extra_keywords = ['data_column', 'antenna_positions'] UV.read_ms(testfile) nt.assert_equal(expected_extra_keywords.sort(), UV.extra_keywords.keys().sort()) del(UV) def test_noSPW(): """Test reading in a PAPER ms convertes by CASA from a uvfits with no spw axis.""" UV = UVData() testfile_no_spw = os.path.join( DATA_PATH, 'zen.2456865.60537.xy.uvcRREAAM.ms') UV.read_ms(testfile_no_spw) del(UV) def test_spwnotsupported(): """Test errors on reading in an ms file with multiple spws.""" UV = UVData() testfile = os.path.join(DATA_PATH, 'day2_TDEM0003_10s_norx_1scan.ms') nt.assert_raises(ValueError, UV.read_ms, testfile) del(UV) def test_readMSreadUVFITS(): """ Test that a uvdata object instantiated from an ms file created with CASA's importuvfits is equal to a uvdata object instantiated from the original uvfits file (tests equivalence with importuvfits in uvdata). Since the histories are different, this test sets both uvdata histories to identical empty strings before comparing them. """ ms_uv = UVData() uvfits_uv = UVData() ms_file = os.path.join(DATA_PATH, 'day2_TDEM0003_10s_norx_1src_1spw.ms') uvfits_file = os.path.join( DATA_PATH, 'day2_TDEM0003_10s_norx_1src_1spw.uvfits') uvtest.checkWarnings(uvfits_uv.read_uvfits, [uvfits_file], message='Telescope EVLA is not') ms_uv.read_ms(ms_file) # set histories to identical blank strings since we do not expect # them to be the same anyways. ms_uv.history = "" uvfits_uv.history = "" # the objects won't be equal because uvfits adds some optional parameters # and the ms sets default antenna diameters even thoug the uvfits file doesn't have them nt.assert_false(uvfits_uv == ms_uv) # they are equal if only required parameters are checked: nt.assert_true(uvfits_uv.__eq__(ms_uv, check_extra=False)) # set those parameters to none to check that the rest of the objects match ms_uv.antenna_diameters = None for p in uvfits_uv.extra(): fits_param = getattr(uvfits_uv, p) ms_param = getattr(ms_uv, p) if fits_param.name in UVFITS.uvfits_required_extra and ms_param.value is None: fits_param.value = None setattr(uvfits_uv, p, fits_param) # extra keywords are also different, set both to empty dicts uvfits_uv.extra_keywords = {} ms_uv.extra_keywords = {} nt.assert_equal(uvfits_uv, ms_uv) del(ms_uv) del(uvfits_uv) def test_readMSWriteUVFITS(): """ read ms, write uvfits test. Read in ms file, write out as uvfits, read back in and check for object equality. """ ms_uv = UVData() uvfits_uv = UVData() ms_file = os.path.join(DATA_PATH, 'day2_TDEM0003_10s_norx_1src_1spw.ms') testfile = os.path.join(DATA_PATH, 'test/outtest_uvfits') ms_uv.read_ms(ms_file) ms_uv.write_uvfits(testfile, spoof_nonessential=True) uvtest.checkWarnings(uvfits_uv.read_uvfits, [testfile], message='Telescope EVLA is not') nt.assert_equal(uvfits_uv, ms_uv) del(ms_uv) del(uvfits_uv) def test_readMSWriteMiriad(): """ read ms, write miriad test. Read in ms file, write out as miriad, read back in and check for object equality. """ ms_uv = UVData() miriad_uv = UVData() ms_file = os.path.join(DATA_PATH, 'day2_TDEM0003_10s_norx_1src_1spw.ms') testfile = os.path.join(DATA_PATH, 'test/outtest_miriad') ms_uv.read_ms(ms_file) ms_uv.write_miriad(testfile, clobber=True) uvtest.checkWarnings(miriad_uv.read_miriad, [testfile], message='Telescope EVLA is not') nt.assert_equal(miriad_uv, ms_uv) def test_multi_files(): """ Reading multiple files at once. """ uv_full = UVData() uv_multi = UVData() uvfits_file = os.path.join( DATA_PATH, 'day2_TDEM0003_10s_norx_1src_1spw.uvfits') uvtest.checkWarnings(uv_full.read_uvfits, [uvfits_file], message='Telescope EVLA is not') testfile1 = os.path.join(DATA_PATH, 'multi_1.ms') testfile2 = os.path.join(DATA_PATH, 'multi_2.ms') uv_multi.read_ms([testfile1, testfile2]) # Casa scrambles the history parameter. Replace for now. uv_multi.history = uv_full.history # the objects won't be equal because uvfits adds some optional parameters # and the ms sets default antenna diameters even thoug the uvfits file doesn't have them nt.assert_false(uv_multi == uv_full) # they are equal if only required parameters are checked: nt.assert_true(uv_multi.__eq__(uv_full, check_extra=False)) # set those parameters to none to check that the rest of the objects match uv_multi.antenna_diameters = None for p in uv_full.extra(): fits_param = getattr(uv_full, p) ms_param = getattr(uv_multi, p) if fits_param.name in UVFITS.uvfits_required_extra and ms_param.value is None: fits_param.value = None setattr(uv_full, p, fits_param) # extra keywords are also different, set both to empty dicts uv_full.extra_keywords = {} uv_multi.extra_keywords = {} nt.assert_equal(uv_multi, uv_full) del(uv_full) del(uv_multi)