#!/usr/bin/env python # # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ # # # # CitcomS.py by Eh Tan, Eun-seo Choi, and Pururav Thoutireddy. # Copyright (C) 2002-2005, California Institute of Technology. # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation; either version 2 of the License, or # (at your option) any later version. # # This program is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program; if not, write to the Free Software # Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA # # # # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ '''Automatically find the input parameters from CitcomS input file and run 'batchcombine.py' usage: autocombine.py machinefile inputfile step1 [step2 [...] ] ''' if __name__ == '__main__': import sys, os if len(sys.argv) < 4: print __doc__ sys.exit(1) machinefile = sys.argv[1] inputfile = sys.argv[2] # parse input from parser import Parser parser = Parser() parser.read(inputfile) datafile = parser.getstr('datafile') import os.path modeldir, modelname = os.path.split(datafile) modeldir = os.path.abspath(modeldir) #print modeldir, modelname nodex = parser.getint('nodex') nodey = parser.getint('nodey') nodez = parser.getint('nodez') ncap = parser.getint('nproc_surf') nprocx = parser.getint('nprocx') nprocy = parser.getint('nprocy') nprocz = parser.getint('nprocz') import batchcombine as combine totalnodes = nprocx * nprocy * nprocz * ncap nodelist = combine.machinefile2nodes(machinefile, totalnodes) for timestep in sys.argv[3:]: combine.combine(nodelist, modeldir, modelname, int(timestep), nodex, nodey, nodez, ncap, nprocx, nprocy, nprocz)