OxCalculatorT2Truncation.h

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#ifndef Tomato_OXCalculatorT2Truncation_H
#define Tomato_OXCalculatorT2Truncation_H

#include "OxCalculator.h"
#include "tomatolib_export.h"

namespace Ox {

    template< typename MeasureType >
    class CalculatorT2Truncation : public Calculator<MeasureType> {
    public:

        virtual int prepareToCalculate();

        virtual int calculate();

        MeasureType calculateR2AbsFromModel(int nSamples, const MeasureType* time, const MeasureType* signal, const MeasureType* parameters);

        const MeasureType * getEchoTimes() const;

        CalculatorT2Truncation() : Calculator<MeasureType>(){
            _SignalAboveSnrLimit = 0;
            _EchoTimesOfSignalAboveSnrLimit = 0;
            _NSamplesAboveSnrLimit = 0;
            _NoiseLimit = 2.;
        }

        virtual ~CalculatorT2Truncation(){
            delete [] _SignalAboveSnrLimit;
            delete [] _EchoTimesOfSignalAboveSnrLimit;
        }

        virtual Calculator<MeasureType> *newByCloning() { return new CalculatorT2Truncation<MeasureType>(*this); }

    private:
        MeasureType _NoiseLimit;
        MeasureType *_SignalAboveSnrLimit; // TODO: Static allocation
        MeasureType *_EchoTimesOfSignalAboveSnrLimit; // TODO: Static allocation
        size_t _NSamplesAboveSnrLimit;

    };

} //namespace Ox

#ifndef TOMATOLIB_COMPILED
#include "OxCalculatorT2Truncation.hxx"
#endif //TOMATOLIB_COMPILED

#endif //Tomato_OXCalculatorT2Truncation_H