https://github.com/ctlab/phantasus
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Tip revision: 7860af3a5537decc933cb79381a493ad62537499 authored by Alexey Sergushichev on 02 June 2018, 09:13:22 UTC
JS: fixed double createES for TCGA data
Tip revision: 7860af3
gseaPlot.Rd
% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/gseaPlot.R
\name{gseaPlot}
\alias{gseaPlot}
\title{Returns path to an svg file with enrichment plot}
\usage{
gseaPlot(fData, fvarLabels, rankBy, selectedGenes, width, height)
}
\arguments{
\item{fData}{list of annotation columns}

\item{fvarLabels}{vector of column names}

\item{rankBy}{name of the numeric column used for gene ranking}

\item{selectedGenes}{indexes of selected genes (starting from one, in the order of fData)}

\item{width}{width of the image (in inches)}

\item{height}{height of the image (in inches)}
}
\value{
path to an svg file
}
\description{
Returns path to an svg file with enrichment plot
}
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