setup.py
#(c) 2016 by Authors
#This file is a part of Ragout program.
#Released under the BSD license (see LICENSE file)
from __future__ import print_function
import sys
#Check Python version
if sys.version_info[:2] != (2, 7):
print("Error: Flye requires Python version 2.7 ({0}.{1} detected)."
.format(sys.version_info[0], sys.version_info[1]))
sys.exit(-1)
from distutils.core import setup
from distutils.command.build import build as DistutilsBuild
import subprocess
from ragout.__version__ import __version__
class MakeBuild(DistutilsBuild):
def run(self):
try:
subprocess.check_call(['make'])
except subprocess.CalledProcessError as e:
print ("Compilation error: ", e)
return
DistutilsBuild.run(self)
setup(name='ragout',
version=__version__,
description='A tool for chromosome assembly using multiple references',
url='https://github.com/fenderglass/Ragout',
author='Mikhail Kolmogorov',
author_email = 'fenderglass@gmail.com',
license='BSD-3-Clause',
packages=['ragout', 'ragout/assembly_graph', 'ragout/breakpoint_graph',
'ragout/maf2synteny', 'ragout/overlap', 'ragout/parsers',
'ragout/phylogeny', 'ragout/scaffolder', 'ragout/shared',
'ragout/synteny_backend', 'ragout/newick'],
package_data={'ragout': ['LICENSE']},
scripts = ['bin/ragout-maf2synteny', 'bin/ragout-overlap', 'bin/ragout'],
cmdclass={'build': MakeBuild}
)