Processing /datahub/rawdata/tandeng/mRNA_imaging/mRNA_confocal_IV/20210307, output /datahub/rawdata/tandeng/mRNA_imaging/mRNA_confocal_IV/20210307_result
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-14T21:07:55.712 Loading 18
189.484811 seconds (1.04 M allocations: 22.135 GiB, 0.58% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 53.460412 seconds (933.49 M allocations: 70.089 GiB, 51.82% gc time)
Finding connected component
  9.785160 seconds (122.66 k allocations: 4.734 GiB, 0.25% gc time)
Detecting contacted branch
  7.263913 seconds (1.31 M allocations: 56.798 GiB, 13.53% gc time)
Found contacted branch: [1, 3, 4, 8, 12]
Splitting branch 1 now
Finding connected component
Reassigning contacted branch 1 
Branch 1 -> 100
Splitting branch 3 now
Finding connected component
Reassigning contacted branch 3 
Branch 3 -> 101
Splitting branch 4 now
Finding connected component
Reassigning contacted branch 4 
Splitting branch 8 now
Finding connected component
Reassigning contacted branch 8 
Splitting branch 12 now
Finding connected component
Reassigning contacted branch 12 
 62.631435 seconds (3.59 M allocations: 137.889 GiB, 9.13% gc time)
Grant domain for each detected cell by watershed
194.466994 seconds (3.17 G allocations: 134.055 GiB, 69.92% gc time)

Drawing longlived_maps
[4, 5, 7, 8, 9, 12, 14, 18, 32, 36, 100, 101]
202.662830 seconds (3.41 G allocations: 142.170 GiB, 69.16% gc time)
tracking cell 1
  1.947985 seconds (10.29 M allocations: 2.227 GiB, 30.91% gc time)
Extracting nucleus
 29.648273 seconds (9.21 M allocations: 22.562 GiB, 74.10% gc time)
  2.094977 seconds (2.39 M allocations: 3.309 GiB, 2.31% gc time)
tracking cell 2
  2.341246 seconds (18.04 M allocations: 3.180 GiB, 49.49% gc time)
Extracting nucleus
 17.690860 seconds (323.26 k allocations: 22.415 GiB, 84.44% gc time)
  0.767273 seconds (2.64 k allocations: 3.208 GiB, 2.46% gc time)
tracking cell 3
  1.534874 seconds (11.70 M allocations: 2.425 GiB, 33.53% gc time)
Extracting nucleus
 15.356488 seconds (323.32 k allocations: 22.317 GiB, 83.41% gc time)
  0.765297 seconds (2.65 k allocations: 3.223 GiB, 1.83% gc time)
tracking cell 4
  1.959420 seconds (14.96 M allocations: 2.814 GiB, 45.02% gc time)
Extracting nucleus
 24.582888 seconds (320.43 k allocations: 22.288 GiB, 88.69% gc time)
  0.815482 seconds (2.63 k allocations: 3.210 GiB, 2.22% gc time)
tracking cell 5
  0.815091 seconds (7.05 M allocations: 1.871 GiB, 1.74% gc time)
Extracting nucleus
 17.019957 seconds (323.16 k allocations: 22.262 GiB, 84.75% gc time)
  0.782580 seconds (2.65 k allocations: 3.178 GiB, 2.41% gc time)
tracking cell 6
  1.367015 seconds (10.16 M allocations: 2.241 GiB, 33.18% gc time)
Extracting nucleus
 19.314262 seconds (323.24 k allocations: 22.324 GiB, 85.19% gc time)
  0.730471 seconds (2.65 k allocations: 3.210 GiB, 2.09% gc time)
tracking cell 7
  2.520633 seconds (18.66 M allocations: 3.254 GiB, 53.84% gc time)
Extracting nucleus
 22.628857 seconds (323.13 k allocations: 22.365 GiB, 87.74% gc time)
  0.780646 seconds (2.65 k allocations: 3.203 GiB, 2.10% gc time)
tracking cell 8
  1.334925 seconds (7.89 M allocations: 1.971 GiB, 27.73% gc time)
Extracting nucleus
 24.755964 seconds (319.13 k allocations: 22.055 GiB, 89.08% gc time)
  0.826160 seconds (2.62 k allocations: 3.239 GiB, 1.72% gc time)
tracking cell 9
  1.451753 seconds (11.07 M allocations: 2.350 GiB, 33.41% gc time)
Extracting nucleus
 22.508579 seconds (319.20 k allocations: 22.183 GiB, 87.90% gc time)
  0.801801 seconds (2.62 k allocations: 3.195 GiB, 2.42% gc time)
tracking cell 10
  1.506326 seconds (10.53 M allocations: 2.285 GiB, 34.70% gc time)
Extracting nucleus
 20.750339 seconds (318.20 k allocations: 22.063 GiB, 86.62% gc time)
  0.804383 seconds (2.62 k allocations: 3.218 GiB, 1.74% gc time)
tracking cell 11
  1.703491 seconds (12.47 M allocations: 2.517 GiB, 40.20% gc time)
Extracting nucleus
 17.439868 seconds (323.18 k allocations: 22.227 GiB, 85.02% gc time)
  0.796686 seconds (2.65 k allocations: 3.216 GiB, 1.80% gc time)
tracking cell 12
  1.739998 seconds (12.79 M allocations: 2.555 GiB, 41.12% gc time)
Extracting nucleus
 22.556332 seconds (321.93 k allocations: 22.317 GiB, 87.66% gc time)
  0.770153 seconds (2.64 k allocations: 3.222 GiB, 2.80% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-14T21:23:54.072 Loading 19
173.660996 seconds (12.78 k allocations: 22.084 GiB, 1.37% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 50.541429 seconds (924.98 M allocations: 69.682 GiB, 59.45% gc time)
Finding connected component
  7.134408 seconds (575 allocations: 4.728 GiB, 0.39% gc time)
Detecting contacted branch
  3.889305 seconds (55.28 k allocations: 23.644 GiB, 24.29% gc time)
Found contacted branch: [3, 13, 16]
Splitting branch 3 now
Finding connected component
Reassigning contacted branch 3 
Branch 3 -> 100
Splitting branch 13 now
Finding connected component
Reassigning contacted branch 13 
Splitting branch 16 now
Finding connected component
Reassigning contacted branch 16 
Branch 16 -> 101
 36.113792 seconds (97.60 k allocations: 72.241 GiB, 9.55% gc time)
Grant domain for each detected cell by watershed
195.355557 seconds (3.20 G allocations: 135.436 GiB, 70.15% gc time)

Drawing longlived_maps
[13, 42, 63, 100, 101]
201.962205 seconds (3.37 G allocations: 142.355 GiB, 69.17% gc time)
tracking cell 1
  3.397416 seconds (17.80 M allocations: 3.152 GiB, 65.68% gc time)
Extracting nucleus
 19.127136 seconds (323.15 k allocations: 22.406 GiB, 85.87% gc time)
  1.013240 seconds (2.61 k allocations: 3.192 GiB, 2.99% gc time)
tracking cell 2
  2.094783 seconds (16.80 M allocations: 3.032 GiB, 43.97% gc time)
Extracting nucleus
 18.149187 seconds (320.67 k allocations: 22.296 GiB, 84.90% gc time)
  0.822179 seconds (2.63 k allocations: 3.211 GiB, 2.28% gc time)
tracking cell 3
  0.740879 seconds (5.38 M allocations: 1.671 GiB, 0.63% gc time)
Extracting nucleus
 21.968924 seconds (318.39 k allocations: 21.989 GiB, 88.49% gc time)
  0.848609 seconds (2.61 k allocations: 3.187 GiB, 2.58% gc time)
tracking cell 4
  3.892705 seconds (23.74 M allocations: 3.860 GiB, 63.75% gc time)
Extracting nucleus
 16.351449 seconds (323.31 k allocations: 22.453 GiB, 83.05% gc time)
  0.821275 seconds (2.65 k allocations: 3.254 GiB, 2.37% gc time)
tracking cell 5
  1.959619 seconds (15.55 M allocations: 2.883 GiB, 43.23% gc time)
Extracting nucleus
 17.050024 seconds (321.49 k allocations: 22.316 GiB, 83.25% gc time)
  0.805447 seconds (2.64 k allocations: 3.204 GiB, 2.32% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-14T21:34:36.733 Loading 20
179.928292 seconds (12.78 k allocations: 22.084 GiB, 1.33% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 51.402924 seconds (924.98 M allocations: 69.682 GiB, 59.33% gc time)
Finding connected component
  6.687390 seconds (477 allocations: 4.728 GiB, 0.38% gc time)
Detecting contacted branch
  3.752592 seconds (55.35 k allocations: 23.644 GiB, 22.81% gc time)
Found contacted branch: [8, 16, 24]
Splitting branch 8 now
Finding connected component
Reassigning contacted branch 8 
Branch 8 -> 100
Splitting branch 16 now
Finding connected component
Reassigning contacted branch 16 
Splitting branch 24 now
Finding connected component
Reassigning contacted branch 24 
 35.915797 seconds (367.98 k allocations: 72.244 GiB, 10.17% gc time)
Grant domain for each detected cell by watershed
188.729380 seconds (3.20 G allocations: 135.790 GiB, 70.21% gc time)

Drawing longlived_maps
[4, 16, 20, 24, 100]
194.650619 seconds (3.33 G allocations: 142.133 GiB, 68.95% gc time)
tracking cell 1
  4.667457 seconds (19.62 M allocations: 3.369 GiB, 68.06% gc time)
Extracting nucleus
 24.423715 seconds (323.25 k allocations: 22.434 GiB, 87.97% gc time)
  0.819527 seconds (2.64 k allocations: 3.208 GiB, 1.47% gc time)
tracking cell 2
  1.964803 seconds (15.75 M allocations: 2.908 GiB, 44.47% gc time)
Extracting nucleus
 20.348806 seconds (322.37 k allocations: 22.340 GiB, 85.95% gc time)
  0.989763 seconds (2.64 k allocations: 3.198 GiB, 1.62% gc time)
tracking cell 3
  2.223237 seconds (17.18 M allocations: 3.078 GiB, 45.98% gc time)
Extracting nucleus
 17.401480 seconds (322.24 k allocations: 22.367 GiB, 83.47% gc time)
  0.775562 seconds (2.64 k allocations: 3.212 GiB, 1.95% gc time)
tracking cell 4
  1.432433 seconds (11.59 M allocations: 2.412 GiB, 32.07% gc time)
Extracting nucleus
 19.384050 seconds (318.46 k allocations: 22.121 GiB, 86.20% gc time)
  0.793549 seconds (2.61 k allocations: 3.233 GiB, 2.32% gc time)
tracking cell 5
  1.603546 seconds (11.75 M allocations: 2.431 GiB, 40.40% gc time)
Extracting nucleus
 18.976887 seconds (321.99 k allocations: 22.284 GiB, 86.13% gc time)
  0.791185 seconds (2.64 k allocations: 3.202 GiB, 2.36% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-14T21:45:25.174 Loading 21
174.284562 seconds (12.78 k allocations: 22.084 GiB, 1.14% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 52.444268 seconds (924.98 M allocations: 69.682 GiB, 61.52% gc time)
Finding connected component
  7.444300 seconds (419 allocations: 4.728 GiB, 0.28% gc time)
Detecting contacted branch
  3.982557 seconds (62.43 k allocations: 28.372 GiB, 21.08% gc time)
Found contacted branch: [5, 14]
Splitting branch 5 now
Finding connected component
Reassigning contacted branch 5 
Branch 5 -> 100
Branch 5 -> 101
Splitting branch 14 now
Finding connected component
Reassigning contacted branch 14 
Branch 14 -> 102
 25.742106 seconds (102.31 k allocations: 60.770 GiB, 8.80% gc time)
Grant domain for each detected cell by watershed
189.057513 seconds (3.22 G allocations: 136.310 GiB, 69.58% gc time)

Drawing longlived_maps
[3, 6, 35, 38, 100, 101, 102]
196.833882 seconds (3.41 G allocations: 143.597 GiB, 68.78% gc time)
tracking cell 1
  2.142931 seconds (17.47 M allocations: 3.113 GiB, 46.46% gc time)
Extracting nucleus
 16.849565 seconds (323.22 k allocations: 22.390 GiB, 84.01% gc time)
  0.822169 seconds (2.64 k allocations: 3.184 GiB, 2.15% gc time)
tracking cell 2
  1.344761 seconds (9.32 M allocations: 2.140 GiB, 31.17% gc time)
Extracting nucleus
 19.124422 seconds (319.88 k allocations: 22.151 GiB, 86.11% gc time)
  0.804368 seconds (2.62 k allocations: 3.183 GiB, 2.27% gc time)
tracking cell 3
  1.478973 seconds (12.23 M allocations: 2.488 GiB, 33.76% gc time)
Extracting nucleus
 24.391379 seconds (318.82 k allocations: 22.194 GiB, 88.89% gc time)
  0.767196 seconds (2.62 k allocations: 3.200 GiB, 1.65% gc time)
tracking cell 4
  1.180804 seconds (7.91 M allocations: 1.973 GiB, 32.04% gc time)
Extracting nucleus
 22.535056 seconds (315.91 k allocations: 21.964 GiB, 88.71% gc time)
  0.829218 seconds (2.61 k allocations: 3.214 GiB, 1.81% gc time)
tracking cell 5
  1.990317 seconds (17.03 M allocations: 3.060 GiB, 46.13% gc time)
Extracting nucleus
 18.374265 seconds (320.36 k allocations: 22.296 GiB, 84.45% gc time)
  0.763028 seconds (2.63 k allocations: 3.194 GiB, 2.44% gc time)
tracking cell 6
  1.926935 seconds (15.32 M allocations: 2.856 GiB, 44.45% gc time)
Extracting nucleus
 17.814749 seconds (320.07 k allocations: 22.278 GiB, 85.07% gc time)
  0.793793 seconds (2.63 k allocations: 3.195 GiB, 2.36% gc time)
tracking cell 7
  2.060163 seconds (14.35 M allocations: 2.740 GiB, 45.96% gc time)
Extracting nucleus
 21.320058 seconds (321.41 k allocations: 22.278 GiB, 87.21% gc time)
  0.796785 seconds (2.63 k allocations: 3.199 GiB, 2.35% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-14T21:57:03.407 Loading 22
168.808848 seconds (12.78 k allocations: 22.084 GiB, 1.03% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 58.668670 seconds (924.98 M allocations: 69.682 GiB, 59.71% gc time)
Finding connected component
  6.865984 seconds (430 allocations: 4.728 GiB, 0.34% gc time)
Detecting contacted branch
  3.840072 seconds (55.17 k allocations: 23.644 GiB, 23.77% gc time)
Found contacted branch: [5, 10, 11, 13]
Splitting branch 5 now
Finding connected component
Reassigning contacted branch 5 
Splitting branch 10 now
Finding connected component
Reassigning contacted branch 10 
Splitting branch 11 now
Finding connected component
Reassigning contacted branch 11 
Branch 11 -> 100
Splitting branch 13 now
Finding connected component
Reassigning contacted branch 13 
 45.353944 seconds (70.43 k allocations: 88.438 GiB, 10.16% gc time)
Grant domain for each detected cell by watershed
186.779553 seconds (3.20 G allocations: 135.471 GiB, 70.36% gc time)

Drawing longlived_maps
[4, 5, 10, 13, 100]
193.796109 seconds (3.38 G allocations: 142.582 GiB, 69.29% gc time)
tracking cell 1
  2.918588 seconds (12.83 M allocations: 2.560 GiB, 62.50% gc time)
Extracting nucleus
 19.292226 seconds (323.20 k allocations: 22.352 GiB, 85.86% gc time)
  0.801878 seconds (2.65 k allocations: 3.199 GiB, 1.85% gc time)
tracking cell 2
  2.030168 seconds (16.72 M allocations: 3.024 GiB, 42.54% gc time)
Extracting nucleus
 18.537191 seconds (322.21 k allocations: 22.368 GiB, 85.70% gc time)
  1.015975 seconds (2.64 k allocations: 3.212 GiB, 1.99% gc time)
tracking cell 3
  1.873400 seconds (13.84 M allocations: 2.680 GiB, 40.22% gc time)
Extracting nucleus
 23.551548 seconds (323.15 k allocations: 22.334 GiB, 88.13% gc time)
  0.806497 seconds (2.65 k allocations: 3.209 GiB, 1.90% gc time)
tracking cell 4
  2.060275 seconds (16.53 M allocations: 3.001 GiB, 43.80% gc time)
Extracting nucleus
 16.460590 seconds (323.29 k allocations: 22.397 GiB, 84.10% gc time)
  0.728385 seconds (2.65 k allocations: 3.213 GiB, 1.80% gc time)
tracking cell 5
  2.599975 seconds (21.57 M allocations: 3.601 GiB, 50.17% gc time)
Extracting nucleus
 17.488195 seconds (323.30 k allocations: 22.434 GiB, 84.49% gc time)
  0.796351 seconds (2.65 k allocations: 3.217 GiB, 1.96% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-14T22:07:52.563 Loading 23
161.336131 seconds (12.78 k allocations: 22.084 GiB, 1.36% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 55.530165 seconds (924.98 M allocations: 69.682 GiB, 60.76% gc time)
Finding connected component
  8.150478 seconds (448 allocations: 4.728 GiB, 0.34% gc time)
Detecting contacted branch
  3.617551 seconds (47.35 k allocations: 18.916 GiB, 22.07% gc time)
Found contacted branch: [3, 10, 11]
Splitting branch 3 now
Finding connected component
Reassigning contacted branch 3 
Splitting branch 10 now
Finding connected component
Reassigning contacted branch 10 
Splitting branch 11 now
Finding connected component
Reassigning contacted branch 11 
 33.681113 seconds (58.56 k allocations: 67.511 GiB, 10.58% gc time)
Grant domain for each detected cell by watershed
191.209176 seconds (3.23 G allocations: 136.962 GiB, 72.10% gc time)

Drawing longlived_maps
[3, 6, 10, 11]
198.095647 seconds (3.40 G allocations: 143.827 GiB, 70.90% gc time)
tracking cell 1
  3.880644 seconds (20.50 M allocations: 3.474 GiB, 62.11% gc time)
Extracting nucleus
 21.353329 seconds (322.36 k allocations: 22.391 GiB, 86.69% gc time)
  0.777221 seconds (2.64 k allocations: 3.212 GiB, 1.91% gc time)
tracking cell 2
  2.678565 seconds (21.42 M allocations: 3.584 GiB, 49.21% gc time)
Extracting nucleus
 19.869525 seconds (323.28 k allocations: 22.445 GiB, 85.77% gc time)
  0.802561 seconds (2.65 k allocations: 3.217 GiB, 2.35% gc time)
tracking cell 3
  1.832556 seconds (14.17 M allocations: 2.720 GiB, 41.58% gc time)
Extracting nucleus
 23.436498 seconds (317.63 k allocations: 22.164 GiB, 87.31% gc time)
  0.778077 seconds (2.62 k allocations: 3.196 GiB, 1.88% gc time)
tracking cell 4
  1.953918 seconds (15.46 M allocations: 2.873 GiB, 45.07% gc time)
Extracting nucleus
 19.077518 seconds (320.17 k allocations: 22.273 GiB, 84.82% gc time)
  0.766922 seconds (2.62 k allocations: 3.198 GiB, 1.73% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-14T22:17:57.109 Loading 24
175.102781 seconds (12.78 k allocations: 22.084 GiB, 1.16% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 55.616490 seconds (924.98 M allocations: 69.682 GiB, 60.48% gc time)
Finding connected component
  7.520018 seconds (476 allocations: 4.728 GiB, 0.30% gc time)
Detecting contacted branch
  3.450222 seconds (47.93 k allocations: 18.916 GiB, 21.71% gc time)
Found contacted branch: [6, 14, 15]
Splitting branch 6 now
Finding connected component
Reassigning contacted branch 6 
Splitting branch 14 now
Finding connected component
Reassigning contacted branch 14 
Splitting branch 15 now
Finding connected component
Reassigning contacted branch 15 
Branch 15 -> 100
 34.354166 seconds (197.72 k allocations: 67.515 GiB, 9.55% gc time)
Grant domain for each detected cell by watershed
199.524932 seconds (3.21 G allocations: 136.050 GiB, 70.98% gc time)

Drawing longlived_maps
[6, 13, 14, 100]
205.147334 seconds (3.32 G allocations: 142.077 GiB, 70.08% gc time)
tracking cell 1
  3.368439 seconds (13.61 M allocations: 2.652 GiB, 68.57% gc time)
Extracting nucleus
 25.195220 seconds (318.38 k allocations: 22.177 GiB, 89.04% gc time)
  0.744770 seconds (2.61 k allocations: 3.203 GiB, 1.92% gc time)
tracking cell 2
  2.521877 seconds (20.90 M allocations: 3.521 GiB, 50.85% gc time)
Extracting nucleus
 19.372088 seconds (323.15 k allocations: 22.436 GiB, 85.56% gc time)
  0.788655 seconds (2.65 k allocations: 3.216 GiB, 2.81% gc time)
tracking cell 3
  1.343847 seconds (10.49 M allocations: 2.281 GiB, 28.63% gc time)
Extracting nucleus
 19.815459 seconds (321.71 k allocations: 22.181 GiB, 86.36% gc time)
  0.791428 seconds (2.63 k allocations: 3.188 GiB, 1.85% gc time)
tracking cell 4
  1.521274 seconds (12.10 M allocations: 2.472 GiB, 35.10% gc time)
Extracting nucleus
 17.270790 seconds (319.58 k allocations: 22.209 GiB, 84.86% gc time)
  0.770091 seconds (2.62 k allocations: 3.202 GiB, 1.75% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-14T22:28:18.884 Loading 25
169.936784 seconds (12.78 k allocations: 22.084 GiB, 1.28% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 58.958053 seconds (924.98 M allocations: 69.682 GiB, 59.69% gc time)
Finding connected component
  8.592252 seconds (554 allocations: 4.728 GiB, 0.40% gc time)
Detecting contacted branch
  4.083175 seconds (77.39 k allocations: 37.829 GiB, 22.79% gc time)
Found contacted branch: [1, 3, 10, 14, 42]
Splitting branch 1 now
Finding connected component
Reassigning contacted branch 1 
Branch 1 -> 100
Splitting branch 3 now
Finding connected component
Reassigning contacted branch 3 
Branch 3 -> 101
Splitting branch 10 now
Finding connected component
Reassigning contacted branch 10 
Splitting branch 14 now
Finding connected component
Reassigning contacted branch 14 
Branch 14 -> 102
Splitting branch 42 now
Finding connected component
Reassigning contacted branch 42 
 57.205779 seconds (471.10 k allocations: 118.828 GiB, 8.96% gc time)
Grant domain for each detected cell by watershed
189.862670 seconds (3.16 G allocations: 133.722 GiB, 71.00% gc time)

Drawing longlived_maps
[10, 12, 16, 32, 42, 100, 101, 102]
197.222539 seconds (3.36 G allocations: 141.132 GiB, 70.10% gc time)
tracking cell 1
  1.675180 seconds (11.03 M allocations: 2.345 GiB, 38.90% gc time)
Extracting nucleus
 22.854890 seconds (317.78 k allocations: 22.141 GiB, 87.55% gc time)
  0.791882 seconds (2.61 k allocations: 3.207 GiB, 1.89% gc time)
tracking cell 2
  2.596972 seconds (21.94 M allocations: 3.645 GiB, 50.27% gc time)
Extracting nucleus
 19.275650 seconds (323.20 k allocations: 22.463 GiB, 84.60% gc time)
  0.773608 seconds (2.65 k allocations: 3.204 GiB, 1.75% gc time)
tracking cell 3
  2.118544 seconds (15.46 M allocations: 2.873 GiB, 46.32% gc time)
Extracting nucleus
 20.606923 seconds (323.25 k allocations: 22.354 GiB, 86.13% gc time)
  0.731033 seconds (2.65 k allocations: 3.206 GiB, 1.84% gc time)
tracking cell 4
  1.831279 seconds (14.31 M allocations: 2.736 GiB, 39.82% gc time)
Extracting nucleus
 24.580787 seconds (321.57 k allocations: 22.322 GiB, 88.86% gc time)
  0.788708 seconds (2.63 k allocations: 3.211 GiB, 1.87% gc time)
tracking cell 5
  1.467573 seconds (13.86 M allocations: 2.682 GiB, 34.15% gc time)
Extracting nucleus
 23.821778 seconds (319.95 k allocations: 22.247 GiB, 88.63% gc time)
  0.782897 seconds (2.62 k allocations: 3.213 GiB, 1.70% gc time)
tracking cell 6
  2.350559 seconds (16.79 M allocations: 3.031 GiB, 48.63% gc time)
Extracting nucleus
 19.509072 seconds (322.03 k allocations: 22.367 GiB, 84.50% gc time)
  0.879862 seconds (2.65 k allocations: 3.218 GiB, 1.72% gc time)
tracking cell 7
  1.828333 seconds (15.36 M allocations: 2.861 GiB, 42.61% gc time)
Extracting nucleus
 23.592908 seconds (319.98 k allocations: 22.269 GiB, 88.42% gc time)
  0.749090 seconds (2.63 k allocations: 3.218 GiB, 2.51% gc time)
tracking cell 8
  2.432779 seconds (18.02 M allocations: 3.178 GiB, 47.09% gc time)
Extracting nucleus
 22.158929 seconds (323.09 k allocations: 22.422 GiB, 87.63% gc time)
  0.802075 seconds (2.65 k allocations: 3.192 GiB, 2.53% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-14T22:41:28.006 Loading 26
174.201043 seconds (12.78 k allocations: 22.084 GiB, 1.15% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 53.894841 seconds (924.98 M allocations: 69.682 GiB, 61.06% gc time)
Finding connected component
  7.572955 seconds (509 allocations: 4.728 GiB, 0.31% gc time)
Detecting contacted branch
  3.724452 seconds (47.72 k allocations: 18.916 GiB, 21.86% gc time)
Found contacted branch: [8, 10, 12]
Splitting branch 8 now
Finding connected component
Reassigning contacted branch 8 
Splitting branch 10 now
Finding connected component
Reassigning contacted branch 10 
Splitting branch 12 now
Finding connected component
Reassigning contacted branch 12 
Branch 12 -> 100
 35.206291 seconds (69.24 k allocations: 67.512 GiB, 9.83% gc time)
Grant domain for each detected cell by watershed
188.769248 seconds (3.19 G allocations: 135.279 GiB, 71.01% gc time)

Drawing longlived_maps
[4, 8, 10, 100]
195.084043 seconds (3.36 G allocations: 142.154 GiB, 70.07% gc time)
tracking cell 1
  3.474147 seconds (19.56 M allocations: 3.362 GiB, 62.66% gc time)
Extracting nucleus
 16.327399 seconds (323.20 k allocations: 22.436 GiB, 82.77% gc time)
  0.758326 seconds (2.65 k allocations: 3.235 GiB, 1.87% gc time)
tracking cell 2
  1.828305 seconds (14.02 M allocations: 2.701 GiB, 39.44% gc time)
Extracting nucleus
 18.307067 seconds (317.43 k allocations: 22.159 GiB, 85.37% gc time)
  0.778682 seconds (2.60 k allocations: 3.190 GiB, 1.93% gc time)
tracking cell 3
  2.305505 seconds (18.33 M allocations: 3.215 GiB, 49.19% gc time)
Extracting nucleus
 24.735014 seconds (322.05 k allocations: 22.355 GiB, 87.96% gc time)
  0.795256 seconds (2.64 k allocations: 3.221 GiB, 2.47% gc time)
tracking cell 4
  2.498476 seconds (20.18 M allocations: 3.436 GiB, 49.16% gc time)
Extracting nucleus
 20.343819 seconds (323.25 k allocations: 22.412 GiB, 86.69% gc time)
  0.784371 seconds (2.65 k allocations: 3.219 GiB, 2.18% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-14T22:51:38.347 Loading 27
169.478352 seconds (12.78 k allocations: 22.084 GiB, 1.11% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 54.934794 seconds (924.98 M allocations: 69.682 GiB, 60.57% gc time)
Finding connected component
  7.759113 seconds (539 allocations: 4.728 GiB, 0.29% gc time)
Detecting contacted branch
  3.506380 seconds (47.62 k allocations: 18.916 GiB, 23.28% gc time)
Found contacted branch: [14]
Splitting branch 14 now
Finding connected component
Reassigning contacted branch 14 
 13.764367 seconds (51.54 k allocations: 35.114 GiB, 11.03% gc time)
Grant domain for each detected cell by watershed
192.521850 seconds (3.19 G allocations: 135.370 GiB, 70.84% gc time)

Drawing longlived_maps
[5, 7, 14, 35]
198.416480 seconds (3.32 G allocations: 141.697 GiB, 69.90% gc time)
tracking cell 1
  2.995975 seconds (14.38 M allocations: 2.744 GiB, 59.24% gc time)
Extracting nucleus
 17.994214 seconds (319.00 k allocations: 22.192 GiB, 85.54% gc time)
  0.799282 seconds (2.62 k allocations: 3.202 GiB, 1.73% gc time)
tracking cell 2
  3.892298 seconds (23.30 M allocations: 3.808 GiB, 64.35% gc time)
Extracting nucleus
 16.807061 seconds (323.20 k allocations: 22.471 GiB, 82.15% gc time)
  0.757247 seconds (2.65 k allocations: 3.219 GiB, 2.00% gc time)
tracking cell 3
  2.061806 seconds (16.68 M allocations: 3.018 GiB, 44.35% gc time)
Extracting nucleus
 23.813421 seconds (322.68 k allocations: 22.390 GiB, 88.46% gc time)
  0.776891 seconds (2.64 k allocations: 3.209 GiB, 1.97% gc time)
tracking cell 4
  1.281835 seconds (9.37 M allocations: 2.147 GiB, 31.64% gc time)
Extracting nucleus
 21.972018 seconds (318.05 k allocations: 22.089 GiB, 86.94% gc time)
  0.800039 seconds (2.61 k allocations: 3.217 GiB, 1.66% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-14T23:01:27.405 Loading 28
154.411367 seconds (12.78 k allocations: 22.084 GiB, 1.37% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 53.627328 seconds (924.98 M allocations: 69.682 GiB, 61.57% gc time)
Finding connected component
  8.108592 seconds (486 allocations: 4.728 GiB, 0.29% gc time)
Detecting contacted branch
  3.650957 seconds (47.97 k allocations: 18.916 GiB, 22.66% gc time)
Found contacted branch: [8, 14, 20]
Splitting branch 8 now
Finding connected component
Reassigning contacted branch 8 
Branch 8 -> 100
Splitting branch 14 now
Finding connected component
Reassigning contacted branch 14 
Branch 14 -> 101
Splitting branch 20 now
Finding connected component
Reassigning contacted branch 20 
 35.007938 seconds (111.59 k allocations: 67.513 GiB, 8.57% gc time)
Grant domain for each detected cell by watershed
192.539253 seconds (3.22 G allocations: 136.163 GiB, 71.47% gc time)

Drawing longlived_maps
[5, 20, 100, 101]
199.241505 seconds (3.36 G allocations: 142.702 GiB, 70.55% gc time)
tracking cell 1
  3.472549 seconds (17.14 M allocations: 3.074 GiB, 60.64% gc time)
Extracting nucleus
 26.402639 seconds (323.22 k allocations: 22.428 GiB, 88.58% gc time)
  0.960663 seconds (2.65 k allocations: 3.201 GiB, 1.73% gc time)
tracking cell 2
  1.267658 seconds (8.47 M allocations: 2.039 GiB, 31.02% gc time)
Extracting nucleus
 20.389584 seconds (323.07 k allocations: 22.183 GiB, 86.22% gc time)
  0.796358 seconds (2.65 k allocations: 3.203 GiB, 2.31% gc time)
tracking cell 3
  2.531981 seconds (19.72 M allocations: 3.381 GiB, 47.25% gc time)
Extracting nucleus
 17.460093 seconds (323.16 k allocations: 22.415 GiB, 84.79% gc time)
  0.802767 seconds (2.65 k allocations: 3.217 GiB, 2.52% gc time)
tracking cell 4
  1.892959 seconds (14.26 M allocations: 2.730 GiB, 42.12% gc time)
Extracting nucleus
 16.575904 seconds (323.21 k allocations: 22.336 GiB, 83.71% gc time)
  0.775061 seconds (2.65 k allocations: 3.216 GiB, 1.74% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-14T23:11:23.029 Loading 29
154.851255 seconds (12.78 k allocations: 22.084 GiB, 1.35% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 56.040785 seconds (924.98 M allocations: 69.682 GiB, 60.75% gc time)
Finding connected component
  7.541003 seconds (547 allocations: 4.728 GiB, 0.30% gc time)
Detecting contacted branch
  3.427616 seconds (48.10 k allocations: 18.916 GiB, 23.61% gc time)
Found contacted branch: [10, 11, 15]
Splitting branch 10 now
Finding connected component
Reassigning contacted branch 10 
Splitting branch 11 now
Finding connected component
Reassigning contacted branch 11 
Splitting branch 15 now
Finding connected component
Reassigning contacted branch 15 
 33.130449 seconds (59.46 k allocations: 67.512 GiB, 9.12% gc time)
Grant domain for each detected cell by watershed
190.257439 seconds (3.18 G allocations: 134.342 GiB, 70.74% gc time)

Drawing longlived_maps
[10, 11, 12, 15]
196.661238 seconds (3.30 G allocations: 140.676 GiB, 69.68% gc time)
tracking cell 1
  3.025182 seconds (8.89 M allocations: 2.090 GiB, 69.84% gc time)
Extracting nucleus
 21.760525 seconds (323.23 k allocations: 22.292 GiB, 87.73% gc time)
  1.011030 seconds (2.65 k allocations: 3.216 GiB, 1.97% gc time)
tracking cell 2
  2.217332 seconds (18.83 M allocations: 3.274 GiB, 44.29% gc time)
Extracting nucleus
 20.525958 seconds (323.34 k allocations: 22.404 GiB, 86.45% gc time)
  0.804587 seconds (2.65 k allocations: 3.229 GiB, 2.30% gc time)
tracking cell 3
  3.833035 seconds (23.31 M allocations: 3.808 GiB, 63.37% gc time)
Extracting nucleus
 17.244239 seconds (323.14 k allocations: 22.470 GiB, 83.73% gc time)
  0.984865 seconds (2.65 k allocations: 3.221 GiB, 1.66% gc time)
tracking cell 4
  1.887485 seconds (13.29 M allocations: 2.615 GiB, 40.70% gc time)
Extracting nucleus
 21.479952 seconds (321.20 k allocations: 22.212 GiB, 86.46% gc time)
  0.786621 seconds (2.63 k allocations: 3.209 GiB, 2.37% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-14T23:21:19.823 Loading 30
167.190018 seconds (12.78 k allocations: 22.084 GiB, 1.25% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 52.091242 seconds (924.98 M allocations: 69.682 GiB, 60.85% gc time)
Finding connected component
  7.706246 seconds (511 allocations: 4.728 GiB, 0.35% gc time)
Detecting contacted branch
  3.383071 seconds (47.44 k allocations: 18.916 GiB, 24.57% gc time)
Found contacted branch: [1, 7, 32]
Splitting branch 1 now
Finding connected component
Reassigning contacted branch 1 
Splitting branch 7 now
Finding connected component
Reassigning contacted branch 7 
Splitting branch 32 now
Finding connected component
Reassigning contacted branch 32 
 32.876968 seconds (58.56 k allocations: 67.511 GiB, 10.23% gc time)
Grant domain for each detected cell by watershed
185.214266 seconds (3.21 G allocations: 135.863 GiB, 71.22% gc time)

Drawing longlived_maps
[1, 7, 16, 32]
192.411659 seconds (3.36 G allocations: 142.587 GiB, 70.35% gc time)
tracking cell 1
  1.378799 seconds (8.44 M allocations: 2.036 GiB, 32.23% gc time)
Extracting nucleus
 22.680251 seconds (317.29 k allocations: 22.007 GiB, 88.10% gc time)
  0.802970 seconds (2.61 k allocations: 3.236 GiB, 1.64% gc time)
tracking cell 2
  2.291598 seconds (18.46 M allocations: 3.231 GiB, 46.96% gc time)
Extracting nucleus
 20.421344 seconds (321.71 k allocations: 22.324 GiB, 86.57% gc time)
  0.799121 seconds (2.64 k allocations: 3.217 GiB, 2.39% gc time)
tracking cell 3
  2.403346 seconds (19.46 M allocations: 3.350 GiB, 49.74% gc time)
Extracting nucleus
 21.859331 seconds (323.25 k allocations: 22.419 GiB, 87.06% gc time)
  0.804885 seconds (2.66 k allocations: 3.215 GiB, 2.33% gc time)
tracking cell 4
  3.800698 seconds (21.53 M allocations: 3.596 GiB, 63.34% gc time)
Extracting nucleus
 23.842152 seconds (322.11 k allocations: 22.389 GiB, 87.52% gc time)
  0.798960 seconds (2.64 k allocations: 3.245 GiB, 1.85% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-14T23:31:29.778 Loading 31
186.086549 seconds (12.78 k allocations: 22.084 GiB, 1.17% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 53.277369 seconds (924.98 M allocations: 69.682 GiB, 60.62% gc time)
Finding connected component
  7.954536 seconds (503 allocations: 4.728 GiB, 0.30% gc time)
Detecting contacted branch
  3.857468 seconds (69.85 k allocations: 33.101 GiB, 19.42% gc time)
Found contacted branch: [3, 6, 10, 30]
Splitting branch 3 now
Finding connected component
Reassigning contacted branch 3 
Branch 3 -> 100
Splitting branch 6 now
Finding connected component
Reassigning contacted branch 6 
Branch 6 -> 101
Splitting branch 10 now
Finding connected component
Reassigning contacted branch 10 
Branch 10 -> 102
Splitting branch 30 now
Finding connected component
Reassigning contacted branch 30 
 44.843463 seconds (287.27 k allocations: 97.900 GiB, 8.94% gc time)
Grant domain for each detected cell by watershed
185.503212 seconds (3.20 G allocations: 135.433 GiB, 70.87% gc time)

Drawing longlived_maps
[1, 8, 16, 30, 100, 101, 102]
192.301961 seconds (3.36 G allocations: 142.286 GiB, 69.97% gc time)
tracking cell 1
  2.426122 seconds (9.63 M allocations: 2.177 GiB, 60.84% gc time)
Extracting nucleus
 20.025369 seconds (323.21 k allocations: 22.228 GiB, 87.04% gc time)
  0.775497 seconds (2.65 k allocations: 3.206 GiB, 1.93% gc time)
tracking cell 2
  1.092455 seconds (6.16 M allocations: 1.764 GiB, 22.32% gc time)
Extracting nucleus
 22.564391 seconds (317.74 k allocations: 22.006 GiB, 87.93% gc time)
  0.844793 seconds (2.61 k allocations: 3.205 GiB, 1.71% gc time)
tracking cell 3
  2.873371 seconds (26.08 M allocations: 4.139 GiB, 48.88% gc time)
Extracting nucleus
 14.721312 seconds (323.19 k allocations: 22.479 GiB, 78.44% gc time)
  0.814818 seconds (2.65 k allocations: 3.238 GiB, 1.88% gc time)
tracking cell 4
  1.429533 seconds (11.56 M allocations: 2.408 GiB, 30.82% gc time)
Extracting nucleus
 18.827103 seconds (320.70 k allocations: 22.240 GiB, 85.59% gc time)
  1.004621 seconds (2.64 k allocations: 3.201 GiB, 1.56% gc time)
tracking cell 5
  1.669936 seconds (11.85 M allocations: 2.442 GiB, 39.29% gc time)
Extracting nucleus
 22.902331 seconds (319.48 k allocations: 22.186 GiB, 88.13% gc time)
  0.811069 seconds (2.63 k allocations: 3.193 GiB, 1.71% gc time)
tracking cell 6
  1.749878 seconds (13.09 M allocations: 2.590 GiB, 38.56% gc time)
Extracting nucleus
 19.686319 seconds (323.32 k allocations: 22.308 GiB, 85.90% gc time)
  0.776368 seconds (2.65 k allocations: 3.196 GiB, 1.88% gc time)
tracking cell 7
  1.425221 seconds (10.58 M allocations: 2.292 GiB, 33.53% gc time)
Extracting nucleus
 20.462522 seconds (321.00 k allocations: 22.249 GiB, 87.17% gc time)
  0.808642 seconds (2.63 k allocations: 3.208 GiB, 2.30% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-14T23:43:38.729 Loading 32
179.096860 seconds (12.78 k allocations: 22.084 GiB, 1.19% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 61.685624 seconds (924.98 M allocations: 69.682 GiB, 61.16% gc time)
Finding connected component
  7.690120 seconds (511 allocations: 4.728 GiB, 0.31% gc time)
Detecting contacted branch
  3.456565 seconds (47.84 k allocations: 18.916 GiB, 23.23% gc time)
Found contacted branch: [11, 16, 38]
Splitting branch 11 now
Finding connected component
Reassigning contacted branch 11 
Branch 11 -> 100
Splitting branch 16 now
Finding connected component
Reassigning contacted branch 16 
Splitting branch 38 now
Finding connected component
Reassigning contacted branch 38 
 35.391412 seconds (59.80 k allocations: 67.512 GiB, 10.19% gc time)
Grant domain for each detected cell by watershed
190.623264 seconds (3.18 G allocations: 134.734 GiB, 70.61% gc time)

Drawing longlived_maps
[16, 20, 38, 100]
196.774857 seconds (3.33 G allocations: 141.353 GiB, 69.68% gc time)
tracking cell 1
  4.795342 seconds (19.72 M allocations: 3.381 GiB, 69.22% gc time)
Extracting nucleus
 21.545897 seconds (323.40 k allocations: 22.398 GiB, 86.71% gc time)
  0.866255 seconds (2.64 k allocations: 3.247 GiB, 1.62% gc time)
tracking cell 2
  1.621496 seconds (10.97 M allocations: 2.337 GiB, 37.75% gc time)
Extracting nucleus
 19.256551 seconds (323.18 k allocations: 22.260 GiB, 86.60% gc time)
  0.786586 seconds (2.65 k allocations: 3.204 GiB, 1.94% gc time)
tracking cell 3
  1.431713 seconds (10.57 M allocations: 2.290 GiB, 32.93% gc time)
Extracting nucleus
 26.481928 seconds (319.43 k allocations: 22.158 GiB, 89.59% gc time)
  0.816873 seconds (2.62 k allocations: 3.218 GiB, 1.80% gc time)
tracking cell 4
  4.090269 seconds (24.87 M allocations: 3.994 GiB, 63.23% gc time)
Extracting nucleus
 19.025019 seconds (323.41 k allocations: 22.482 GiB, 84.64% gc time)
  0.794624 seconds (2.65 k allocations: 3.304 GiB, 2.40% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-14T23:54:15.962 Loading 33
165.878367 seconds (12.78 k allocations: 22.084 GiB, 1.26% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 54.517143 seconds (924.98 M allocations: 69.682 GiB, 61.60% gc time)
Finding connected component
  7.667957 seconds (468 allocations: 4.728 GiB, 0.31% gc time)
Detecting contacted branch
  3.571048 seconds (48.18 k allocations: 18.916 GiB, 21.71% gc time)
Found contacted branch: [13, 15, 17]
Splitting branch 13 now
Finding connected component
Reassigning contacted branch 13 
Splitting branch 15 now
Finding connected component
Reassigning contacted branch 15 
Branch 15 -> 100
Splitting branch 17 now
Finding connected component
Reassigning contacted branch 17 
Branch 17 -> 101
 36.728191 seconds (97.99 k allocations: 67.513 GiB, 9.70% gc time)
Grant domain for each detected cell by watershed
197.573981 seconds (3.19 G allocations: 135.068 GiB, 69.44% gc time)

Drawing longlived_maps
[13, 14, 100, 101]
203.585494 seconds (3.32 G allocations: 141.419 GiB, 68.50% gc time)
tracking cell 1
  3.900615 seconds (22.41 M allocations: 3.701 GiB, 60.16% gc time)
Extracting nucleus
 21.585956 seconds (323.31 k allocations: 22.424 GiB, 86.51% gc time)
  0.911047 seconds (2.65 k allocations: 3.309 GiB, 1.96% gc time)
tracking cell 2
  1.826923 seconds (13.96 M allocations: 2.694 GiB, 42.67% gc time)
Extracting nucleus
 22.393871 seconds (323.20 k allocations: 22.382 GiB, 87.39% gc time)
  0.798260 seconds (2.65 k allocations: 3.191 GiB, 1.89% gc time)
tracking cell 3
  1.372358 seconds (10.07 M allocations: 2.231 GiB, 33.71% gc time)
Extracting nucleus
 23.266298 seconds (319.98 k allocations: 22.208 GiB, 87.99% gc time)
  0.809736 seconds (2.63 k allocations: 3.210 GiB, 2.20% gc time)
tracking cell 4
  1.452819 seconds (10.53 M allocations: 2.285 GiB, 34.90% gc time)
Extracting nucleus
 19.331524 seconds (323.25 k allocations: 22.263 GiB, 86.48% gc time)
  0.799900 seconds (2.65 k allocations: 3.224 GiB, 1.67% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T00:04:36.289 Loading 34
158.820870 seconds (12.78 k allocations: 22.084 GiB, 1.39% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 55.007756 seconds (924.98 M allocations: 69.682 GiB, 61.52% gc time)
Finding connected component
  8.400678 seconds (642 allocations: 4.729 GiB, 0.32% gc time)
Detecting contacted branch
  4.073254 seconds (70.09 k allocations: 33.101 GiB, 20.69% gc time)
Found contacted branch: [5, 6, 14, 18]
Splitting branch 5 now
Finding connected component
Reassigning contacted branch 5 
Splitting branch 6 now
Finding connected component
Reassigning contacted branch 6 
Splitting branch 14 now
Finding connected component
Reassigning contacted branch 14 
Splitting branch 18 now
Finding connected component
Reassigning contacted branch 18 
Branch 18 -> 100
 47.467754 seconds (474.77 k allocations: 97.903 GiB, 9.17% gc time)
Grant domain for each detected cell by watershed
190.210641 seconds (3.19 G allocations: 135.015 GiB, 70.80% gc time)

Drawing longlived_maps
[5, 6, 11, 14, 21, 22, 100]
194.826427 seconds (3.28 G allocations: 140.840 GiB, 69.61% gc time)
tracking cell 1
  2.803782 seconds (11.84 M allocations: 2.441 GiB, 57.76% gc time)
Extracting nucleus
 19.328229 seconds (323.20 k allocations: 22.330 GiB, 85.27% gc time)
  0.987241 seconds (2.65 k allocations: 3.205 GiB, 1.50% gc time)
tracking cell 2
  1.420381 seconds (10.54 M allocations: 2.287 GiB, 32.99% gc time)
Extracting nucleus
 18.288589 seconds (320.59 k allocations: 22.196 GiB, 85.61% gc time)
  0.809316 seconds (2.64 k allocations: 3.216 GiB, 1.80% gc time)
tracking cell 3
  1.855390 seconds (13.82 M allocations: 2.678 GiB, 43.67% gc time)
Extracting nucleus
 17.383945 seconds (323.19 k allocations: 22.386 GiB, 84.28% gc time)
  0.735199 seconds (2.65 k allocations: 3.204 GiB, 2.46% gc time)
tracking cell 4
  1.335813 seconds (10.32 M allocations: 2.260 GiB, 34.33% gc time)
Extracting nucleus
 18.253285 seconds (318.06 k allocations: 22.145 GiB, 85.65% gc time)
  0.983438 seconds (2.61 k allocations: 3.203 GiB, 1.55% gc time)
tracking cell 5
  1.347263 seconds (9.37 M allocations: 2.147 GiB, 31.75% gc time)
Extracting nucleus
 22.424538 seconds (320.23 k allocations: 22.118 GiB, 87.04% gc time)
  1.007399 seconds (2.63 k allocations: 3.236 GiB, 1.63% gc time)
tracking cell 6
  1.439049 seconds (10.78 M allocations: 2.315 GiB, 28.99% gc time)
Extracting nucleus
 23.670659 seconds (323.02 k allocations: 22.263 GiB, 88.50% gc time)
  0.732252 seconds (2.64 k allocations: 3.201 GiB, 1.97% gc time)
tracking cell 7
  1.722591 seconds (12.40 M allocations: 2.508 GiB, 37.65% gc time)
Extracting nucleus
 22.059480 seconds (323.26 k allocations: 22.235 GiB, 87.12% gc time)
  0.771561 seconds (2.65 k allocations: 3.213 GiB, 1.94% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T00:16:26.734 Loading 35
177.575131 seconds (12.78 k allocations: 22.084 GiB, 1.03% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 54.366162 seconds (924.98 M allocations: 69.682 GiB, 60.75% gc time)
Finding connected component
  7.661683 seconds (525 allocations: 4.728 GiB, 0.37% gc time)
Detecting contacted branch
  4.243861 seconds (70.11 k allocations: 33.101 GiB, 21.14% gc time)
Found contacted branch: [8, 10, 11, 15, 25]
Splitting branch 8 now
Finding connected component
Reassigning contacted branch 8 
Branch 8 -> 100
Splitting branch 10 now
Finding connected component
Reassigning contacted branch 10 
Splitting branch 11 now
Finding connected component
Reassigning contacted branch 11 
Branch 11 -> 101
Branch 11 -> 102
Splitting branch 15 now
Finding connected component
Reassigning contacted branch 15 
Splitting branch 25 now
Finding connected component
Reassigning contacted branch 25 
Branch 25 -> 103
 59.102822 seconds (109.37 k allocations: 114.095 GiB, 9.16% gc time)
Grant domain for each detected cell by watershed
191.939710 seconds (3.19 G allocations: 135.239 GiB, 69.93% gc time)

Drawing longlived_maps
[10, 15, 17, 40, 100, 101, 102, 103]
198.578017 seconds (3.38 G allocations: 142.490 GiB, 69.02% gc time)
tracking cell 1
  2.507185 seconds (12.05 M allocations: 2.467 GiB, 60.59% gc time)
Extracting nucleus
 18.923218 seconds (323.28 k allocations: 22.346 GiB, 85.55% gc time)
  0.727333 seconds (2.64 k allocations: 3.220 GiB, 2.01% gc time)
tracking cell 2
  2.455116 seconds (19.95 M allocations: 3.408 GiB, 50.04% gc time)
Extracting nucleus
 22.018096 seconds (323.27 k allocations: 22.456 GiB, 86.07% gc time)
  0.788092 seconds (2.65 k allocations: 3.249 GiB, 2.40% gc time)
tracking cell 3
  1.201203 seconds (6.73 M allocations: 1.832 GiB, 25.71% gc time)
Extracting nucleus
 20.229529 seconds (321.57 k allocations: 22.075 GiB, 87.21% gc time)
  0.857301 seconds (2.64 k allocations: 3.298 GiB, 2.13% gc time)
tracking cell 4
  1.826197 seconds (13.96 M allocations: 2.694 GiB, 42.34% gc time)
Extracting nucleus
 19.968260 seconds (320.16 k allocations: 22.256 GiB, 86.57% gc time)
  0.790844 seconds (2.62 k allocations: 3.202 GiB, 1.89% gc time)
tracking cell 5
  1.786378 seconds (13.81 M allocations: 2.676 GiB, 44.53% gc time)
Extracting nucleus
 21.861982 seconds (319.06 k allocations: 22.224 GiB, 87.10% gc time)
  0.814324 seconds (2.62 k allocations: 3.192 GiB, 2.11% gc time)
tracking cell 6
  2.028018 seconds (15.23 M allocations: 2.845 GiB, 44.60% gc time)
Extracting nucleus
 14.752352 seconds (323.21 k allocations: 22.386 GiB, 80.56% gc time)
  0.942774 seconds (2.64 k allocations: 3.220 GiB, 1.75% gc time)
tracking cell 7
  1.808330 seconds (14.03 M allocations: 2.702 GiB, 42.23% gc time)
Extracting nucleus
 20.200060 seconds (321.38 k allocations: 22.312 GiB, 86.45% gc time)
  0.798620 seconds (2.63 k allocations: 3.203 GiB, 2.50% gc time)
tracking cell 8
  2.511800 seconds (20.53 M allocations: 3.477 GiB, 49.10% gc time)
Extracting nucleus
 18.365381 seconds (322.51 k allocations: 22.389 GiB, 85.11% gc time)
  0.785570 seconds (2.64 k allocations: 3.219 GiB, 1.89% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T00:29:24.291 Loading 36
162.984022 seconds (12.78 k allocations: 22.084 GiB, 1.32% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 57.680717 seconds (924.98 M allocations: 69.682 GiB, 61.95% gc time)
Finding connected component
  8.189396 seconds (457 allocations: 4.728 GiB, 0.29% gc time)
Detecting contacted branch
  4.121167 seconds (69.81 k allocations: 33.101 GiB, 20.65% gc time)
Found contacted branch: [1, 4, 8, 14]
Splitting branch 1 now
Finding connected component
Reassigning contacted branch 1 
Splitting branch 4 now
Finding connected component
Reassigning contacted branch 4 
Branch 4 -> 100
Splitting branch 8 now
Finding connected component
Reassigning contacted branch 8 
Splitting branch 14 now
Finding connected component
Reassigning contacted branch 14 
Branch 14 -> 101
 47.478184 seconds (174.48 k allocations: 97.898 GiB, 8.87% gc time)
Grant domain for each detected cell by watershed
194.619456 seconds (3.21 G allocations: 135.945 GiB, 70.88% gc time)

Drawing longlived_maps
[1, 8, 9, 15, 17, 100, 101]
201.843406 seconds (3.39 G allocations: 143.114 GiB, 69.75% gc time)
tracking cell 1
  2.999484 seconds (10.10 M allocations: 2.234 GiB, 61.66% gc time)
Extracting nucleus
 23.981473 seconds (318.81 k allocations: 22.128 GiB, 88.08% gc time)
  0.807501 seconds (2.62 k allocations: 3.201 GiB, 1.63% gc time)
tracking cell 2
  2.187628 seconds (19.25 M allocations: 3.324 GiB, 44.11% gc time)
Extracting nucleus
 20.533675 seconds (323.26 k allocations: 22.444 GiB, 86.24% gc time)
  0.791178 seconds (2.65 k allocations: 3.205 GiB, 1.88% gc time)
tracking cell 3
  2.270602 seconds (17.62 M allocations: 3.131 GiB, 47.71% gc time)
Extracting nucleus
 19.886938 seconds (320.87 k allocations: 22.307 GiB, 85.27% gc time)
  0.980131 seconds (2.63 k allocations: 3.213 GiB, 2.06% gc time)
tracking cell 4
  2.547542 seconds (20.78 M allocations: 3.507 GiB, 49.85% gc time)
Extracting nucleus
 18.643619 seconds (323.18 k allocations: 22.446 GiB, 84.87% gc time)
  0.808838 seconds (2.64 k allocations: 3.210 GiB, 1.71% gc time)
tracking cell 5
  1.432071 seconds (12.60 M allocations: 2.532 GiB, 36.49% gc time)
Extracting nucleus
 21.077853 seconds (323.20 k allocations: 22.252 GiB, 87.80% gc time)
  0.971498 seconds (2.65 k allocations: 3.196 GiB, 1.93% gc time)
tracking cell 6
  1.382324 seconds (10.02 M allocations: 2.224 GiB, 32.04% gc time)
Extracting nucleus
 21.230710 seconds (319.60 k allocations: 22.182 GiB, 87.30% gc time)
  0.774294 seconds (2.62 k allocations: 3.193 GiB, 2.50% gc time)
tracking cell 7
  2.608948 seconds (19.38 M allocations: 3.340 GiB, 51.37% gc time)
Extracting nucleus
 23.497493 seconds (323.25 k allocations: 22.427 GiB, 87.40% gc time)
  0.733796 seconds (2.64 k allocations: 3.224 GiB, 2.02% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T00:41:39.261 Loading 37
179.083456 seconds (12.78 k allocations: 22.084 GiB, 1.23% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 57.840018 seconds (924.98 M allocations: 69.682 GiB, 61.81% gc time)
Finding connected component
  8.430726 seconds (474 allocations: 4.728 GiB, 0.28% gc time)
Detecting contacted branch
  4.277643 seconds (77.43 k allocations: 37.829 GiB, 20.60% gc time)
Found contacted branch: [7, 9, 15, 18]
Splitting branch 7 now
Finding connected component
Reassigning contacted branch 7 
Branch 7 -> 100
Splitting branch 9 now
Finding connected component
Reassigning contacted branch 9 
Splitting branch 15 now
Finding connected component
Reassigning contacted branch 15 
Splitting branch 18 now
Finding connected component
Reassigning contacted branch 18 
Branch 18 -> 101
 47.121757 seconds (97.24 k allocations: 102.624 GiB, 8.66% gc time)
Grant domain for each detected cell by watershed
181.484880 seconds (3.16 G allocations: 133.747 GiB, 71.62% gc time)

Drawing longlived_maps
[2, 9, 13, 15, 17, 36, 100, 101]
189.324043 seconds (3.35 G allocations: 141.053 GiB, 70.79% gc time)
tracking cell 1
  2.314473 seconds (17.49 M allocations: 3.114 GiB, 47.65% gc time)
Extracting nucleus
 20.693549 seconds (323.00 k allocations: 22.328 GiB, 86.59% gc time)
  0.836373 seconds (2.64 k allocations: 3.210 GiB, 1.62% gc time)
tracking cell 2
  1.343400 seconds (9.43 M allocations: 2.154 GiB, 31.37% gc time)
Extracting nucleus
 22.100708 seconds (317.58 k allocations: 22.109 GiB, 87.93% gc time)
  0.784308 seconds (2.60 k allocations: 3.189 GiB, 1.68% gc time)
tracking cell 3
  1.472708 seconds (10.33 M allocations: 2.262 GiB, 33.54% gc time)
Extracting nucleus
 20.694176 seconds (323.19 k allocations: 22.310 GiB, 87.30% gc time)
  0.764286 seconds (2.65 k allocations: 3.205 GiB, 1.69% gc time)
tracking cell 4
  2.169069 seconds (17.42 M allocations: 3.107 GiB, 41.59% gc time)
Extracting nucleus
 19.080224 seconds (323.22 k allocations: 22.403 GiB, 85.11% gc time)
  0.791683 seconds (2.65 k allocations: 3.217 GiB, 2.32% gc time)
tracking cell 5
  1.917606 seconds (15.49 M allocations: 2.877 GiB, 45.89% gc time)
Extracting nucleus
 14.346714 seconds (323.25 k allocations: 22.416 GiB, 81.33% gc time)
  0.806058 seconds (2.65 k allocations: 3.230 GiB, 2.72% gc time)
tracking cell 6
  1.579936 seconds (11.09 M allocations: 2.353 GiB, 34.57% gc time)
Extracting nucleus
 26.037023 seconds (317.44 k allocations: 22.099 GiB, 88.77% gc time)
  0.737078 seconds (2.61 k allocations: 3.195 GiB, 2.01% gc time)
tracking cell 7
  2.023253 seconds (15.94 M allocations: 2.930 GiB, 39.37% gc time)
Extracting nucleus
 21.236055 seconds (320.18 k allocations: 22.273 GiB, 86.78% gc time)
  0.752256 seconds (2.63 k allocations: 3.202 GiB, 2.45% gc time)
tracking cell 8
  3.760837 seconds (22.88 M allocations: 3.757 GiB, 64.11% gc time)
Extracting nucleus
 21.371652 seconds (323.34 k allocations: 22.451 GiB, 86.56% gc time)
  0.938566 seconds (2.65 k allocations: 3.263 GiB, 1.73% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T00:54:28.833 Loading 38
206.042806 seconds (12.78 k allocations: 22.084 GiB, 1.06% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 62.822858 seconds (924.98 M allocations: 69.682 GiB, 60.85% gc time)
Finding connected component
  6.919991 seconds (504 allocations: 4.728 GiB, 0.34% gc time)
Detecting contacted branch
  3.400070 seconds (54.33 k allocations: 23.644 GiB, 26.14% gc time)
Found contacted branch: [11]
Splitting branch 11 now
Finding connected component
Reassigning contacted branch 11 
Branch 11 -> 100
 14.587821 seconds (58.34 k allocations: 39.842 GiB, 9.67% gc time)
Grant domain for each detected cell by watershed
196.917068 seconds (3.20 G allocations: 135.394 GiB, 70.99% gc time)

Drawing longlived_maps
[1, 2, 3, 16, 100]
202.351397 seconds (3.32 G allocations: 141.648 GiB, 69.99% gc time)
tracking cell 1
  4.355963 seconds (20.62 M allocations: 3.488 GiB, 71.06% gc time)
Extracting nucleus
 23.716748 seconds (323.20 k allocations: 22.430 GiB, 88.03% gc time)
  0.774974 seconds (2.64 k allocations: 3.219 GiB, 1.91% gc time)
tracking cell 2
  1.640438 seconds (10.91 M allocations: 2.331 GiB, 36.99% gc time)
Extracting nucleus
 22.160976 seconds (320.78 k allocations: 22.183 GiB, 87.17% gc time)
  0.776092 seconds (2.63 k allocations: 3.222 GiB, 1.84% gc time)
tracking cell 3
  1.583582 seconds (11.10 M allocations: 2.353 GiB, 41.04% gc time)
Extracting nucleus
 19.481066 seconds (323.21 k allocations: 22.222 GiB, 85.20% gc time)
  0.803342 seconds (2.65 k allocations: 3.216 GiB, 2.23% gc time)
tracking cell 4
  1.530280 seconds (9.81 M allocations: 2.200 GiB, 35.18% gc time)
Extracting nucleus
 23.253394 seconds (318.11 k allocations: 22.081 GiB, 88.13% gc time)
  0.759050 seconds (2.61 k allocations: 3.205 GiB, 1.73% gc time)
tracking cell 5
  2.099623 seconds (14.71 M allocations: 2.784 GiB, 43.80% gc time)
Extracting nucleus
 23.217340 seconds (319.22 k allocations: 22.236 GiB, 88.09% gc time)
  0.922402 seconds (2.62 k allocations: 3.212 GiB, 1.80% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T01:05:51.684 Loading 39
174.094449 seconds (12.78 k allocations: 22.084 GiB, 1.12% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 57.154643 seconds (924.98 M allocations: 69.682 GiB, 61.67% gc time)
Finding connected component
  6.942281 seconds (468 allocations: 4.728 GiB, 0.36% gc time)
Detecting contacted branch
  3.504720 seconds (54.94 k allocations: 23.644 GiB, 23.50% gc time)
Found contacted branch: [1, 5]
Splitting branch 1 now
Finding connected component
Reassigning contacted branch 1 
Splitting branch 5 now
Finding connected component
Reassigning contacted branch 5 
Branch 5 -> 100
 24.385487 seconds (64.74 k allocations: 56.041 GiB, 9.56% gc time)
Grant domain for each detected cell by watershed
196.716221 seconds (3.19 G allocations: 135.276 GiB, 70.12% gc time)

Drawing longlived_maps
[1, 12, 14, 25, 100]
202.838433 seconds (3.33 G allocations: 141.762 GiB, 69.24% gc time)
tracking cell 1
  2.844948 seconds (13.89 M allocations: 2.686 GiB, 62.38% gc time)
Extracting nucleus
 26.027039 seconds (319.40 k allocations: 22.223 GiB, 88.81% gc time)
  0.782351 seconds (2.62 k allocations: 3.248 GiB, 2.13% gc time)
tracking cell 2
  2.812907 seconds (22.93 M allocations: 3.763 GiB, 52.43% gc time)
Extracting nucleus
 20.859620 seconds (323.33 k allocations: 22.448 GiB, 86.46% gc time)
  0.815300 seconds (2.65 k allocations: 3.245 GiB, 2.06% gc time)
tracking cell 3
  0.733115 seconds (3.75 M allocations: 1.478 GiB, 0.49% gc time)
Extracting nucleus
 22.610478 seconds (316.45 k allocations: 21.908 GiB, 88.59% gc time)
  0.851270 seconds (2.62 k allocations: 3.254 GiB, 2.20% gc time)
tracking cell 4
  1.180865 seconds (7.07 M allocations: 1.873 GiB, 28.93% gc time)
Extracting nucleus
 23.750699 seconds (321.09 k allocations: 22.122 GiB, 89.19% gc time)
  0.774447 seconds (2.54 k allocations: 3.168 GiB, 1.96% gc time)
tracking cell 5
  2.354496 seconds (18.33 M allocations: 3.215 GiB, 48.70% gc time)
Extracting nucleus
 23.020052 seconds (323.29 k allocations: 22.384 GiB, 87.66% gc time)
  0.809556 seconds (2.65 k allocations: 3.246 GiB, 2.12% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T01:16:51.619 Loading 40
192.853121 seconds (12.78 k allocations: 22.084 GiB, 1.14% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 55.642914 seconds (924.98 M allocations: 69.682 GiB, 61.07% gc time)
Finding connected component
  6.896867 seconds (468 allocations: 4.728 GiB, 0.42% gc time)
Detecting contacted branch
  3.470293 seconds (54.78 k allocations: 23.644 GiB, 25.07% gc time)
Found contacted branch: [4, 29, 37]
Splitting branch 4 now
Finding connected component
Reassigning contacted branch 4 
Branch 4 -> 100
Splitting branch 29 now
Finding connected component
Reassigning contacted branch 29 
Splitting branch 37 now
Finding connected component
Reassigning contacted branch 37 
 35.388977 seconds (66.82 k allocations: 72.240 GiB, 8.74% gc time)
Grant domain for each detected cell by watershed
189.947014 seconds (3.20 G allocations: 135.572 GiB, 71.00% gc time)

Drawing longlived_maps
[6, 9, 29, 37, 100]
197.758903 seconds (3.38 G allocations: 142.693 GiB, 70.22% gc time)
tracking cell 1
  2.686451 seconds (18.96 M allocations: 3.291 GiB, 51.81% gc time)
Extracting nucleus
 19.726176 seconds (322.96 k allocations: 22.432 GiB, 84.90% gc time)
  0.888014 seconds (2.65 k allocations: 3.226 GiB, 1.69% gc time)
tracking cell 2
  2.023227 seconds (16.91 M allocations: 3.046 GiB, 44.57% gc time)
Extracting nucleus
 18.481003 seconds (323.13 k allocations: 22.412 GiB, 85.08% gc time)
  0.847769 seconds (2.65 k allocations: 3.199 GiB, 1.91% gc time)
tracking cell 3
  2.130261 seconds (16.33 M allocations: 2.977 GiB, 46.05% gc time)
Extracting nucleus
 22.368260 seconds (320.56 k allocations: 22.279 GiB, 87.82% gc time)
  0.795503 seconds (2.62 k allocations: 3.214 GiB, 2.48% gc time)
tracking cell 4
  1.532218 seconds (9.79 M allocations: 2.196 GiB, 34.86% gc time)
Extracting nucleus
 17.871605 seconds (318.38 k allocations: 22.101 GiB, 85.08% gc time)
  0.831838 seconds (2.62 k allocations: 3.209 GiB, 1.82% gc time)
tracking cell 5
  2.425585 seconds (18.97 M allocations: 3.291 GiB, 50.34% gc time)
Extracting nucleus
 22.294965 seconds (323.28 k allocations: 22.419 GiB, 87.07% gc time)
  0.792291 seconds (2.65 k allocations: 3.237 GiB, 1.68% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T01:28:00.217 Loading 41
199.587666 seconds (12.78 k allocations: 22.084 GiB, 1.09% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 58.154694 seconds (924.98 M allocations: 69.682 GiB, 61.50% gc time)
Finding connected component
  8.135753 seconds (440 allocations: 4.728 GiB, 0.34% gc time)
Detecting contacted branch
  3.890038 seconds (69.92 k allocations: 33.101 GiB, 20.09% gc time)
Found contacted branch: [2, 7, 15, 16]
Splitting branch 2 now
Finding connected component
Reassigning contacted branch 2 
Branch 2 -> 100
Splitting branch 7 now
Finding connected component
Reassigning contacted branch 7 
Splitting branch 15 now
Finding connected component
Reassigning contacted branch 15 
Splitting branch 16 now
Finding connected component
Reassigning contacted branch 16 
Branch 16 -> 101
 45.885123 seconds (268.90 k allocations: 97.899 GiB, 8.60% gc time)
Grant domain for each detected cell by watershed
191.930532 seconds (3.18 G allocations: 135.041 GiB, 71.27% gc time)

Drawing longlived_maps
[3, 7, 15, 18, 35, 100, 101]
199.595284 seconds (3.39 G allocations: 142.497 GiB, 70.49% gc time)
tracking cell 1
  4.319110 seconds (26.77 M allocations: 4.221 GiB, 63.38% gc time)
Extracting nucleus
 17.888355 seconds (323.31 k allocations: 22.482 GiB, 83.97% gc time)
  0.802046 seconds (2.65 k allocations: 3.235 GiB, 2.13% gc time)
tracking cell 2
  1.467465 seconds (9.93 M allocations: 2.214 GiB, 38.86% gc time)
Extracting nucleus
 18.803737 seconds (317.77 k allocations: 22.139 GiB, 84.45% gc time)
  0.771926 seconds (2.61 k allocations: 3.207 GiB, 1.75% gc time)
tracking cell 3
  1.556200 seconds (10.51 M allocations: 2.283 GiB, 31.23% gc time)
Extracting nucleus
 20.480453 seconds (320.16 k allocations: 22.125 GiB, 87.35% gc time)
  0.796526 seconds (2.63 k allocations: 3.226 GiB, 2.31% gc time)
tracking cell 4
  2.211396 seconds (18.52 M allocations: 3.238 GiB, 44.80% gc time)
Extracting nucleus
 18.849311 seconds (322.41 k allocations: 22.383 GiB, 85.86% gc time)
  0.784246 seconds (2.65 k allocations: 3.230 GiB, 1.93% gc time)
tracking cell 5
  1.443778 seconds (9.78 M allocations: 2.196 GiB, 36.88% gc time)
Extracting nucleus
 22.978662 seconds (318.68 k allocations: 22.099 GiB, 88.30% gc time)
  1.005580 seconds (2.62 k allocations: 3.220 GiB, 1.49% gc time)
tracking cell 6
  2.119236 seconds (16.31 M allocations: 2.975 GiB, 46.92% gc time)
Extracting nucleus
 23.632113 seconds (319.70 k allocations: 22.265 GiB, 87.89% gc time)
  0.752510 seconds (2.62 k allocations: 3.212 GiB, 1.81% gc time)
tracking cell 7
  2.167302 seconds (16.74 M allocations: 3.025 GiB, 48.69% gc time)
Extracting nucleus
 16.317319 seconds (321.62 k allocations: 22.346 GiB, 83.63% gc time)
  1.779219 seconds (2.63 k allocations: 3.217 GiB, 55.88% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T01:40:40.087 Loading 42
197.366550 seconds (12.78 k allocations: 22.084 GiB, 1.06% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 61.239642 seconds (924.98 M allocations: 69.682 GiB, 61.67% gc time)
Finding connected component
  8.617941 seconds (391 allocations: 4.728 GiB, 0.27% gc time)
Detecting contacted branch
  4.329645 seconds (77.50 k allocations: 37.829 GiB, 19.32% gc time)
Found contacted branch: [8, 24, 27]
Splitting branch 8 now
Finding connected component
Reassigning contacted branch 8 
Splitting branch 24 now
Finding connected component
Reassigning contacted branch 24 
Splitting branch 27 now
Finding connected component
Reassigning contacted branch 27 
 34.056071 seconds (88.76 k allocations: 86.425 GiB, 10.14% gc time)
Grant domain for each detected cell by watershed
189.668708 seconds (3.15 G allocations: 133.695 GiB, 71.43% gc time)

Drawing longlived_maps
[7, 8, 9, 11, 16, 17, 24, 27]
198.059429 seconds (3.38 G allocations: 141.504 GiB, 70.72% gc time)
tracking cell 1
  2.715821 seconds (18.81 M allocations: 3.273 GiB, 52.51% gc time)
Extracting nucleus
 21.512252 seconds (323.26 k allocations: 22.395 GiB, 85.89% gc time)
  0.802232 seconds (2.65 k allocations: 3.219 GiB, 2.30% gc time)
tracking cell 2
  2.513760 seconds (20.58 M allocations: 3.484 GiB, 49.95% gc time)
Extracting nucleus
 18.911474 seconds (323.23 k allocations: 22.443 GiB, 84.84% gc time)
  0.801977 seconds (2.65 k allocations: 3.210 GiB, 2.33% gc time)
tracking cell 3
  2.459884 seconds (19.68 M allocations: 3.376 GiB, 50.96% gc time)
Extracting nucleus
 22.728034 seconds (323.25 k allocations: 22.459 GiB, 87.21% gc time)
  1.041073 seconds (2.65 k allocations: 3.210 GiB, 1.89% gc time)
tracking cell 4
  2.182092 seconds (16.77 M allocations: 3.029 GiB, 45.88% gc time)
Extracting nucleus
 21.891499 seconds (323.26 k allocations: 22.434 GiB, 86.16% gc time)
  0.807567 seconds (2.65 k allocations: 3.210 GiB, 2.02% gc time)
tracking cell 5
  4.546068 seconds (23.98 M allocations: 3.889 GiB, 64.97% gc time)
Extracting nucleus
 14.975061 seconds (322.60 k allocations: 22.445 GiB, 80.12% gc time)
  0.733528 seconds (2.65 k allocations: 3.233 GiB, 1.99% gc time)
tracking cell 6
  2.247661 seconds (17.28 M allocations: 3.090 GiB, 45.93% gc time)
Extracting nucleus
 23.388957 seconds (322.53 k allocations: 22.343 GiB, 88.14% gc time)
  0.843536 seconds (2.64 k allocations: 3.240 GiB, 1.60% gc time)
tracking cell 7
  1.396495 seconds (11.08 M allocations: 2.351 GiB, 33.14% gc time)
Extracting nucleus
 22.526086 seconds (321.52 k allocations: 22.199 GiB, 88.33% gc time)
  0.818228 seconds (2.63 k allocations: 3.222 GiB, 2.21% gc time)
tracking cell 8
  1.485222 seconds (10.92 M allocations: 2.332 GiB, 34.22% gc time)
Extracting nucleus
 23.766879 seconds (318.68 k allocations: 22.140 GiB, 88.68% gc time)
  0.846004 seconds (2.62 k allocations: 3.233 GiB, 2.35% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T01:53:56.098 Loading 43
229.539907 seconds (12.78 k allocations: 22.084 GiB, 0.98% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 62.591393 seconds (924.98 M allocations: 69.682 GiB, 60.13% gc time)
Finding connected component
  7.965690 seconds (472 allocations: 4.728 GiB, 0.38% gc time)
Detecting contacted branch
  3.337192 seconds (40.50 k allocations: 14.188 GiB, 27.36% gc time)
Found contacted branch: Int64[]
  3.404285 seconds (124.43 k allocations: 14.192 GiB, 26.82% gc time)
Grant domain for each detected cell by watershed
198.692466 seconds (3.19 G allocations: 135.043 GiB, 69.88% gc time)

Drawing longlived_maps
[7, 10, 11]
203.822379 seconds (3.29 G allocations: 141.006 GiB, 68.92% gc time)
tracking cell 1
  3.814851 seconds (16.07 M allocations: 2.945 GiB, 64.49% gc time)
Extracting nucleus
 21.268748 seconds (323.31 k allocations: 22.333 GiB, 86.53% gc time)
  0.874039 seconds (2.65 k allocations: 3.225 GiB, 2.11% gc time)
tracking cell 2
  3.831992 seconds (20.59 M allocations: 3.485 GiB, 62.52% gc time)
Extracting nucleus
 18.359076 seconds (323.27 k allocations: 22.419 GiB, 84.64% gc time)
  0.798118 seconds (2.65 k allocations: 3.231 GiB, 2.21% gc time)
tracking cell 3
  2.530648 seconds (18.81 M allocations: 3.273 GiB, 47.29% gc time)
Extracting nucleus
 26.226954 seconds (323.30 k allocations: 22.392 GiB, 89.18% gc time)
  0.870550 seconds (2.64 k allocations: 3.234 GiB, 2.85% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T02:04:23.078 Loading 44
152.470598 seconds (12.78 k allocations: 22.084 GiB, 1.58% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 59.633545 seconds (924.98 M allocations: 69.682 GiB, 58.98% gc time)
Finding connected component
  7.758340 seconds (438 allocations: 4.728 GiB, 0.31% gc time)
Detecting contacted branch
  4.015835 seconds (47.77 k allocations: 18.916 GiB, 19.22% gc time)
Found contacted branch: [1, 2]
Splitting branch 1 now
Finding connected component
Reassigning contacted branch 1 
Branch 1 -> 100
Splitting branch 2 now
Finding connected component
Reassigning contacted branch 2 
 25.439298 seconds (131.16 k allocations: 51.314 GiB, 8.14% gc time)
Grant domain for each detected cell by watershed
199.118529 seconds (3.20 G allocations: 135.269 GiB, 72.37% gc time)

Drawing longlived_maps
[2, 9, 15, 100]
206.280666 seconds (3.37 G allocations: 142.300 GiB, 71.45% gc time)
tracking cell 1
  3.103610 seconds (13.82 M allocations: 2.677 GiB, 59.25% gc time)
Extracting nucleus
 30.863857 seconds (321.90 k allocations: 22.260 GiB, 90.30% gc time)
  0.788368 seconds (2.64 k allocations: 3.227 GiB, 1.79% gc time)
tracking cell 2
  2.052471 seconds (14.15 M allocations: 2.717 GiB, 45.33% gc time)
Extracting nucleus
 20.030404 seconds (323.20 k allocations: 22.301 GiB, 86.46% gc time)
  0.779789 seconds (2.66 k allocations: 3.210 GiB, 1.77% gc time)
tracking cell 3
  2.532782 seconds (21.64 M allocations: 3.610 GiB, 50.17% gc time)
Extracting nucleus
 20.238700 seconds (322.76 k allocations: 22.421 GiB, 86.18% gc time)
  0.782921 seconds (2.65 k allocations: 3.210 GiB, 2.29% gc time)
tracking cell 4
  2.049701 seconds (14.76 M allocations: 2.790 GiB, 39.12% gc time)
Extracting nucleus
 22.116083 seconds (323.24 k allocations: 22.365 GiB, 87.53% gc time)
  0.826870 seconds (2.65 k allocations: 3.209 GiB, 2.22% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T02:14:33.372 Loading 45
172.126787 seconds (12.78 k allocations: 22.084 GiB, 1.27% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 68.572918 seconds (924.98 M allocations: 69.682 GiB, 60.94% gc time)
Finding connected component
  5.761471 seconds (431 allocations: 4.728 GiB, 0.38% gc time)
Detecting contacted branch
  3.040655 seconds (32.78 k allocations: 9.459 GiB, 24.34% gc time)
Found contacted branch: [11]
Splitting branch 11 now
Finding connected component
Reassigning contacted branch 11 
 12.915299 seconds (36.76 k allocations: 25.658 GiB, 9.04% gc time)
Grant domain for each detected cell by watershed
210.296994 seconds (3.23 G allocations: 137.099 GiB, 68.93% gc time)

Drawing longlived_maps
[11, 31]
215.191801 seconds (3.30 G allocations: 142.601 GiB, 67.99% gc time)
tracking cell 1
  4.093913 seconds (22.05 M allocations: 3.659 GiB, 66.25% gc time)
Extracting nucleus
 20.674822 seconds (323.24 k allocations: 22.430 GiB, 86.25% gc time)
  0.830157 seconds (2.64 k allocations: 3.231 GiB, 2.14% gc time)
tracking cell 2
  1.981750 seconds (14.07 M allocations: 2.708 GiB, 44.84% gc time)
Extracting nucleus
 24.911067 seconds (319.37 k allocations: 22.196 GiB, 88.98% gc time)
  0.795361 seconds (2.62 k allocations: 3.214 GiB, 2.07% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T02:23:49.558 Loading 46
182.392513 seconds (12.78 k allocations: 22.084 GiB, 1.26% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 67.377606 seconds (924.98 M allocations: 69.682 GiB, 58.99% gc time)
Finding connected component
  7.691539 seconds (393 allocations: 4.728 GiB, 0.28% gc time)
Detecting contacted branch
  3.533131 seconds (47.69 k allocations: 18.916 GiB, 22.66% gc time)
Found contacted branch: [2, 6, 9]
Splitting branch 2 now
Finding connected component
Reassigning contacted branch 2 
Branch 2 -> 100
Splitting branch 6 now
Finding connected component
Reassigning contacted branch 6 
Splitting branch 9 now
Finding connected component
Reassigning contacted branch 9 
 37.941914 seconds (194.76 k allocations: 67.513 GiB, 9.18% gc time)
Grant domain for each detected cell by watershed
210.296034 seconds (3.20 G allocations: 135.684 GiB, 70.62% gc time)

Drawing longlived_maps
[6, 9, 11, 100]
216.518120 seconds (3.35 G allocations: 142.359 GiB, 69.74% gc time)
tracking cell 1
  5.058547 seconds (22.37 M allocations: 3.697 GiB, 70.67% gc time)
Extracting nucleus
 17.335377 seconds (323.26 k allocations: 22.449 GiB, 83.59% gc time)
  0.810373 seconds (2.65 k allocations: 3.218 GiB, 1.71% gc time)
tracking cell 2
  1.766950 seconds (13.67 M allocations: 2.659 GiB, 42.51% gc time)
Extracting nucleus
 23.648332 seconds (318.85 k allocations: 22.201 GiB, 88.02% gc time)
  0.850416 seconds (2.62 k allocations: 3.219 GiB, 2.16% gc time)
tracking cell 3
  2.087730 seconds (16.20 M allocations: 2.961 GiB, 42.46% gc time)
Extracting nucleus
 22.839934 seconds (319.74 k allocations: 22.272 GiB, 88.03% gc time)
  0.785637 seconds (2.62 k allocations: 3.222 GiB, 1.91% gc time)
tracking cell 4
  1.607478 seconds (13.94 M allocations: 2.691 GiB, 34.67% gc time)
Extracting nucleus
 23.732835 seconds (320.22 k allocations: 22.208 GiB, 87.98% gc time)
  0.800428 seconds (2.63 k allocations: 3.271 GiB, 2.12% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T02:34:55.989 Loading 47
160.469639 seconds (12.78 k allocations: 22.084 GiB, 1.52% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 58.752470 seconds (924.98 M allocations: 69.682 GiB, 62.19% gc time)
Finding connected component
  8.057285 seconds (459 allocations: 4.728 GiB, 0.26% gc time)
Detecting contacted branch
  3.991693 seconds (69.83 k allocations: 33.101 GiB, 21.46% gc time)
Found contacted branch: [4, 6, 10, 24]
Splitting branch 4 now
Finding connected component
Reassigning contacted branch 4 
Branch 4 -> 100
Splitting branch 6 now
Finding connected component
Reassigning contacted branch 6 
Branch 6 -> 101
Splitting branch 10 now
Finding connected component
Reassigning contacted branch 10 
Branch 10 -> 102
Splitting branch 24 now
Finding connected component
Reassigning contacted branch 24 
 49.255519 seconds (398.29 k allocations: 97.900 GiB, 9.41% gc time)
Grant domain for each detected cell by watershed
208.448656 seconds (3.20 G allocations: 135.491 GiB, 69.11% gc time)

Drawing longlived_maps
[5, 11, 14, 24, 100, 101, 102]
216.441428 seconds (3.43 G allocations: 143.298 GiB, 68.46% gc time)
tracking cell 1
  2.947567 seconds (20.03 M allocations: 3.417 GiB, 52.12% gc time)
Extracting nucleus
 17.085525 seconds (323.18 k allocations: 22.438 GiB, 83.66% gc time)
  0.811379 seconds (2.65 k allocations: 3.222 GiB, 2.32% gc time)
tracking cell 2
  2.802935 seconds (22.46 M allocations: 3.707 GiB, 46.03% gc time)
Extracting nucleus
 19.473496 seconds (323.25 k allocations: 22.459 GiB, 84.93% gc time)
  0.774316 seconds (2.65 k allocations: 3.205 GiB, 1.88% gc time)
tracking cell 3
  1.424266 seconds (9.43 M allocations: 2.155 GiB, 32.57% gc time)
Extracting nucleus
 21.110732 seconds (319.55 k allocations: 22.089 GiB, 87.22% gc time)
  0.822504 seconds (2.63 k allocations: 3.226 GiB, 1.63% gc time)
tracking cell 4
  1.230184 seconds (8.14 M allocations: 2.000 GiB, 29.04% gc time)
Extracting nucleus
 26.261674 seconds (318.03 k allocations: 22.100 GiB, 89.64% gc time)
  0.804403 seconds (2.61 k allocations: 3.190 GiB, 1.86% gc time)
tracking cell 5
  2.479126 seconds (18.17 M allocations: 3.196 GiB, 45.58% gc time)
Extracting nucleus
 24.365984 seconds (323.14 k allocations: 22.376 GiB, 88.51% gc time)
  0.839020 seconds (2.65 k allocations: 3.271 GiB, 1.74% gc time)
tracking cell 6
  2.052334 seconds (17.19 M allocations: 3.079 GiB, 43.65% gc time)
Extracting nucleus
 25.282577 seconds (319.01 k allocations: 22.232 GiB, 88.09% gc time)
  0.823777 seconds (2.62 k allocations: 3.220 GiB, 1.80% gc time)
tracking cell 7
  2.038761 seconds (16.74 M allocations: 3.026 GiB, 41.47% gc time)
Extracting nucleus
 18.984967 seconds (323.02 k allocations: 22.400 GiB, 85.95% gc time)
  0.802096 seconds (2.66 k allocations: 3.223 GiB, 2.35% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T02:47:31.087 Loading 48
224.266871 seconds (12.78 k allocations: 22.084 GiB, 1.06% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 63.975505 seconds (924.98 M allocations: 69.682 GiB, 62.42% gc time)
Finding connected component
  8.085840 seconds (547 allocations: 4.728 GiB, 0.26% gc time)
Detecting contacted branch
  4.105986 seconds (69.62 k allocations: 33.101 GiB, 21.66% gc time)
Found contacted branch: [12]
Splitting branch 12 now
Finding connected component
Reassigning contacted branch 12 
 14.269140 seconds (73.44 k allocations: 49.299 GiB, 11.15% gc time)
Grant domain for each detected cell by watershed
203.676626 seconds (3.17 G allocations: 134.345 GiB, 69.16% gc time)

Drawing longlived_maps
[12, 18, 19, 21, 23, 41, 42]
209.847960 seconds (3.31 G allocations: 140.917 GiB, 68.30% gc time)
tracking cell 1
  3.365006 seconds (15.79 M allocations: 2.912 GiB, 58.65% gc time)
Extracting nucleus
 18.301283 seconds (323.34 k allocations: 22.380 GiB, 84.90% gc time)
  0.812865 seconds (2.64 k allocations: 3.218 GiB, 2.15% gc time)
tracking cell 2
  2.015940 seconds (15.54 M allocations: 2.883 GiB, 39.07% gc time)
Extracting nucleus
 18.320381 seconds (323.28 k allocations: 22.379 GiB, 85.36% gc time)
  0.797613 seconds (2.65 k allocations: 3.213 GiB, 2.21% gc time)
tracking cell 3
  1.436278 seconds (10.33 M allocations: 2.261 GiB, 33.71% gc time)
Extracting nucleus
 22.050476 seconds (317.51 k allocations: 22.101 GiB, 87.58% gc time)
  0.782331 seconds (2.61 k allocations: 3.210 GiB, 2.22% gc time)
tracking cell 4
  1.423604 seconds (11.86 M allocations: 2.444 GiB, 34.17% gc time)
Extracting nucleus
 23.104625 seconds (323.20 k allocations: 22.265 GiB, 88.40% gc time)
  0.775518 seconds (2.65 k allocations: 3.210 GiB, 1.89% gc time)
tracking cell 5
  0.798384 seconds (7.54 M allocations: 1.929 GiB, 0.49% gc time)
Extracting nucleus
 21.529943 seconds (323.11 k allocations: 22.164 GiB, 88.20% gc time)
  0.827996 seconds (2.65 k allocations: 3.211 GiB, 2.44% gc time)
tracking cell 6
  1.405537 seconds (10.45 M allocations: 2.276 GiB, 34.49% gc time)
Extracting nucleus
 23.089376 seconds (320.15 k allocations: 22.180 GiB, 88.62% gc time)
  0.790307 seconds (2.63 k allocations: 3.204 GiB, 1.68% gc time)
tracking cell 7
  1.751475 seconds (12.23 M allocations: 2.488 GiB, 38.37% gc time)
Extracting nucleus
 21.387811 seconds (318.36 k allocations: 22.166 GiB, 87.21% gc time)
  0.801702 seconds (2.62 k allocations: 3.197 GiB, 1.81% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T03:00:23.413 Loading 49
159.797184 seconds (12.78 k allocations: 22.084 GiB, 1.42% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 51.818607 seconds (924.98 M allocations: 69.682 GiB, 62.66% gc time)
Finding connected component
  8.813455 seconds (443 allocations: 4.728 GiB, 0.24% gc time)
Detecting contacted branch
  4.766258 seconds (84.27 k allocations: 42.557 GiB, 17.94% gc time)
Found contacted branch: [14, 15, 17]
Splitting branch 14 now
Finding connected component
Reassigning contacted branch 14 
Splitting branch 15 now
Finding connected component
Reassigning contacted branch 15 
Splitting branch 17 now
Finding connected component
Reassigning contacted branch 17 
 35.309733 seconds (95.58 k allocations: 91.153 GiB, 8.96% gc time)
Grant domain for each detected cell by watershed
197.795446 seconds (3.15 G allocations: 133.308 GiB, 69.01% gc time)

Drawing longlived_maps
[4, 6, 13, 14, 15, 16, 17, 29, 30]
205.637209 seconds (3.34 G allocations: 140.676 GiB, 68.29% gc time)
tracking cell 1
  1.968470 seconds (15.40 M allocations: 2.866 GiB, 45.11% gc time)
Extracting nucleus
 22.771560 seconds (318.04 k allocations: 22.190 GiB, 87.49% gc time)
  0.843727 seconds (2.62 k allocations: 3.210 GiB, 2.19% gc time)
tracking cell 2
  2.095012 seconds (16.23 M allocations: 2.965 GiB, 38.83% gc time)
Extracting nucleus
 20.431369 seconds (323.20 k allocations: 22.395 GiB, 86.84% gc time)
  0.813216 seconds (2.65 k allocations: 3.216 GiB, 2.22% gc time)
tracking cell 3
  2.062589 seconds (15.85 M allocations: 2.920 GiB, 41.89% gc time)
Extracting nucleus
 23.524148 seconds (321.65 k allocations: 22.342 GiB, 88.19% gc time)
  0.813998 seconds (2.64 k allocations: 3.210 GiB, 1.90% gc time)
tracking cell 4
  2.382458 seconds (18.75 M allocations: 3.265 GiB, 45.98% gc time)
Extracting nucleus
 23.222152 seconds (323.19 k allocations: 22.388 GiB, 87.58% gc time)
  0.813565 seconds (2.64 k allocations: 3.253 GiB, 1.73% gc time)
tracking cell 5
  1.926454 seconds (14.65 M allocations: 2.776 GiB, 40.17% gc time)
Extracting nucleus
 19.017648 seconds (322.62 k allocations: 22.344 GiB, 85.83% gc time)
  0.843200 seconds (2.65 k allocations: 3.202 GiB, 1.85% gc time)
tracking cell 6
  1.185745 seconds (7.29 M allocations: 1.899 GiB, 27.29% gc time)
Extracting nucleus
 22.895788 seconds (319.63 k allocations: 22.059 GiB, 87.77% gc time)
  0.836393 seconds (2.62 k allocations: 3.224 GiB, 1.73% gc time)
tracking cell 7
  1.203797 seconds (8.46 M allocations: 2.039 GiB, 27.99% gc time)
Extracting nucleus
 18.538396 seconds (317.80 k allocations: 22.047 GiB, 85.45% gc time)
  0.811576 seconds (2.59 k allocations: 3.208 GiB, 1.74% gc time)
tracking cell 8
  1.216403 seconds (7.98 M allocations: 1.981 GiB, 28.72% gc time)
Extracting nucleus
 21.871000 seconds (319.66 k allocations: 22.070 GiB, 88.26% gc time)
  0.868489 seconds (2.63 k allocations: 3.263 GiB, 1.77% gc time)
tracking cell 9
  2.386773 seconds (15.86 M allocations: 2.920 GiB, 47.22% gc time)
Extracting nucleus
 21.506739 seconds (320.08 k allocations: 22.269 GiB, 87.65% gc time)
  0.808699 seconds (2.62 k allocations: 3.212 GiB, 1.73% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T03:13:35.858 Loading 50
203.002865 seconds (12.78 k allocations: 22.084 GiB, 1.05% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 58.983276 seconds (924.98 M allocations: 69.682 GiB, 63.28% gc time)
Finding connected component
  6.863865 seconds (563 allocations: 4.728 GiB, 0.31% gc time)
Detecting contacted branch
  3.761211 seconds (54.89 k allocations: 23.644 GiB, 21.75% gc time)
Found contacted branch: [19, 23]
Splitting branch 19 now
Finding connected component
Reassigning contacted branch 19 
Splitting branch 23 now
Finding connected component
Reassigning contacted branch 23 
 24.536197 seconds (62.49 k allocations: 56.041 GiB, 9.16% gc time)
Grant domain for each detected cell by watershed
189.555408 seconds (3.16 G allocations: 134.402 GiB, 71.23% gc time)

Drawing longlived_maps
[3, 12, 14, 19, 23]
193.973509 seconds (3.26 G allocations: 140.252 GiB, 70.06% gc time)
tracking cell 1
  3.740198 seconds (9.02 M allocations: 2.105 GiB, 68.15% gc time)
Extracting nucleus
 25.310808 seconds (321.03 k allocations: 22.124 GiB, 89.05% gc time)
  0.826155 seconds (2.63 k allocations: 3.209 GiB, 1.49% gc time)
tracking cell 2
  2.598539 seconds (16.58 M allocations: 3.006 GiB, 45.00% gc time)
Extracting nucleus
 19.513912 seconds (323.19 k allocations: 22.380 GiB, 85.47% gc time)
  0.758867 seconds (2.65 k allocations: 3.210 GiB, 1.96% gc time)
tracking cell 3
  1.883967 seconds (11.57 M allocations: 2.409 GiB, 33.49% gc time)
Extracting nucleus
 23.871994 seconds (323.27 k allocations: 22.239 GiB, 88.55% gc time)
  1.060965 seconds (2.65 k allocations: 3.209 GiB, 1.66% gc time)
tracking cell 4
  1.439532 seconds (12.04 M allocations: 2.466 GiB, 29.98% gc time)
Extracting nucleus
 23.969576 seconds (320.63 k allocations: 22.241 GiB, 88.74% gc time)
  0.780067 seconds (2.62 k allocations: 3.213 GiB, 2.37% gc time)
tracking cell 5
  1.991513 seconds (12.67 M allocations: 2.541 GiB, 38.02% gc time)
Extracting nucleus
 22.128930 seconds (323.27 k allocations: 22.314 GiB, 87.43% gc time)
  0.819918 seconds (2.65 k allocations: 3.204 GiB, 2.18% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T03:24:57.524 Loading 51
157.727646 seconds (12.78 k allocations: 22.084 GiB, 1.25% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 68.535907 seconds (924.98 M allocations: 69.682 GiB, 60.96% gc time)
Finding connected component
  7.777317 seconds (685 allocations: 4.729 GiB, 0.27% gc time)
Detecting contacted branch
  3.628414 seconds (47.77 k allocations: 18.916 GiB, 21.95% gc time)
Found contacted branch: [2, 5, 14, 25]
Splitting branch 2 now
Finding connected component
Reassigning contacted branch 2 
Branch 2 -> 100
Splitting branch 5 now
Finding connected component
Reassigning contacted branch 5 
Branch 5 -> 101
Splitting branch 14 now
Finding connected component
Reassigning contacted branch 14 
Branch 14 -> 102
Splitting branch 25 now
Finding connected component
Reassigning contacted branch 25 
Branch 25 -> 103
 50.824738 seconds (492.46 k allocations: 83.721 GiB, 8.57% gc time)
Grant domain for each detected cell by watershed
194.097528 seconds (3.18 G allocations: 134.908 GiB, 71.29% gc time)

Drawing longlived_maps
[100, 101, 102, 103]
198.538519 seconds (3.27 G allocations: 140.547 GiB, 70.19% gc time)
tracking cell 1
  2.221704 seconds (7.06 M allocations: 1.871 GiB, 57.01% gc time)
Extracting nucleus
 21.603116 seconds (322.74 k allocations: 22.135 GiB, 88.57% gc time)
  0.824509 seconds (2.65 k allocations: 3.239 GiB, 2.15% gc time)
tracking cell 2
  2.575822 seconds (16.65 M allocations: 3.015 GiB, 40.19% gc time)
Extracting nucleus
 16.451264 seconds (323.19 k allocations: 22.373 GiB, 83.22% gc time)
  0.804153 seconds (2.65 k allocations: 3.211 GiB, 2.24% gc time)
tracking cell 3
  2.330369 seconds (15.75 M allocations: 2.908 GiB, 41.36% gc time)
Extracting nucleus
 19.187690 seconds (323.21 k allocations: 22.386 GiB, 85.55% gc time)
  0.984466 seconds (2.66 k allocations: 3.223 GiB, 2.08% gc time)
tracking cell 4
  1.732678 seconds (11.39 M allocations: 2.387 GiB, 37.33% gc time)
Extracting nucleus
 19.442309 seconds (323.30 k allocations: 22.265 GiB, 85.18% gc time)
  0.826937 seconds (2.65 k allocations: 3.205 GiB, 1.76% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T03:35:22.84 Loading 52
216.312714 seconds (12.78 k allocations: 22.084 GiB, 1.02% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 58.134591 seconds (924.98 M allocations: 69.682 GiB, 61.78% gc time)
Finding connected component
  7.689644 seconds (545 allocations: 4.728 GiB, 0.33% gc time)
Detecting contacted branch
  3.826757 seconds (47.60 k allocations: 18.916 GiB, 22.39% gc time)
Found contacted branch: [1, 2, 57]
Splitting branch 1 now
Finding connected component
Reassigning contacted branch 1 
Splitting branch 2 now
Finding connected component
Reassigning contacted branch 2 
Branch 2 -> 100
Splitting branch 57 now
Finding connected component
Reassigning contacted branch 57 
 35.374132 seconds (70.98 k allocations: 67.512 GiB, 8.59% gc time)
Grant domain for each detected cell by watershed
208.125878 seconds (3.21 G allocations: 136.214 GiB, 68.31% gc time)

Drawing longlived_maps
[1, 46, 57, 100]
214.199624 seconds (3.37 G allocations: 143.001 GiB, 67.51% gc time)
tracking cell 1
  2.697711 seconds (11.03 M allocations: 2.345 GiB, 64.41% gc time)
Extracting nucleus
 23.499208 seconds (318.33 k allocations: 22.130 GiB, 88.54% gc time)
  0.803489 seconds (2.61 k allocations: 3.198 GiB, 1.78% gc time)
tracking cell 2
  1.751415 seconds (11.73 M allocations: 2.429 GiB, 43.67% gc time)
Extracting nucleus
 21.338614 seconds (319.71 k allocations: 22.210 GiB, 87.01% gc time)
  0.816357 seconds (2.62 k allocations: 3.203 GiB, 1.82% gc time)
tracking cell 3
  1.971680 seconds (16.23 M allocations: 2.965 GiB, 45.37% gc time)
Extracting nucleus
 18.362841 seconds (318.63 k allocations: 22.216 GiB, 83.56% gc time)
  0.769934 seconds (2.62 k allocations: 3.204 GiB, 1.81% gc time)
tracking cell 4
  2.294842 seconds (16.77 M allocations: 3.030 GiB, 43.52% gc time)
Extracting nucleus
 24.617626 seconds (319.25 k allocations: 22.232 GiB, 88.77% gc time)
  0.817279 seconds (2.62 k allocations: 3.235 GiB, 2.43% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T03:46:45.618 Loading 53
236.347126 seconds (12.78 k allocations: 22.084 GiB, 1.13% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 63.232711 seconds (924.98 M allocations: 69.682 GiB, 61.82% gc time)
Finding connected component
  6.721405 seconds (592 allocations: 4.728 GiB, 0.42% gc time)
Detecting contacted branch
  3.838282 seconds (54.84 k allocations: 23.644 GiB, 22.84% gc time)
Found contacted branch: [4, 14, 16, 19]
Splitting branch 4 now
Finding connected component
Reassigning contacted branch 4 
Splitting branch 14 now
Finding connected component
Reassigning contacted branch 14 
Splitting branch 16 now
Finding connected component
Reassigning contacted branch 16 
Splitting branch 19 now
Finding connected component
Reassigning contacted branch 19 
 45.147062 seconds (70.00 k allocations: 88.438 GiB, 9.60% gc time)
Grant domain for each detected cell by watershed
199.742722 seconds (3.21 G allocations: 135.992 GiB, 70.76% gc time)

Drawing longlived_maps
[4, 11, 14, 16, 19]
206.144845 seconds (3.38 G allocations: 142.923 GiB, 69.84% gc time)
tracking cell 1
  3.584662 seconds (15.68 M allocations: 2.899 GiB, 59.27% gc time)
Extracting nucleus
 17.921991 seconds (323.27 k allocations: 22.360 GiB, 84.59% gc time)
  0.802518 seconds (2.65 k allocations: 3.216 GiB, 1.87% gc time)
tracking cell 2
  2.060725 seconds (12.97 M allocations: 2.577 GiB, 34.69% gc time)
Extracting nucleus
 18.988484 seconds (323.27 k allocations: 22.346 GiB, 85.21% gc time)
  0.794306 seconds (2.65 k allocations: 3.203 GiB, 1.77% gc time)
tracking cell 3
  2.062169 seconds (14.58 M allocations: 2.768 GiB, 37.69% gc time)
Extracting nucleus
 21.547560 seconds (322.33 k allocations: 22.336 GiB, 87.37% gc time)
  0.741664 seconds (2.64 k allocations: 3.202 GiB, 1.93% gc time)
tracking cell 4
  1.700995 seconds (13.31 M allocations: 2.617 GiB, 27.01% gc time)
Extracting nucleus
 17.225911 seconds (323.21 k allocations: 22.355 GiB, 85.21% gc time)
  0.815374 seconds (2.65 k allocations: 3.209 GiB, 2.30% gc time)
tracking cell 5
  1.650304 seconds (11.63 M allocations: 2.416 GiB, 39.39% gc time)
Extracting nucleus
 18.577192 seconds (320.47 k allocations: 22.208 GiB, 84.34% gc time)
  0.807368 seconds (2.63 k allocations: 3.207 GiB, 2.36% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T03:58:55.757 Loading 54
225.784241 seconds (12.78 k allocations: 22.084 GiB, 1.04% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 57.451691 seconds (924.98 M allocations: 69.682 GiB, 63.16% gc time)
Finding connected component
  7.264651 seconds (478 allocations: 4.728 GiB, 0.34% gc time)
Detecting contacted branch
  3.267250 seconds (39.94 k allocations: 14.187 GiB, 25.68% gc time)
Found contacted branch: Int64[]
  3.267378 seconds (39.98 k allocations: 14.187 GiB, 25.68% gc time)
Grant domain for each detected cell by watershed
205.294532 seconds (3.22 G allocations: 136.531 GiB, 69.14% gc time)

Drawing longlived_maps
[2, 3, 14]
212.295317 seconds (3.35 G allocations: 142.859 GiB, 68.41% gc time)
tracking cell 1
  4.260649 seconds (24.96 M allocations: 4.006 GiB, 60.46% gc time)
Extracting nucleus
 25.871582 seconds (323.13 k allocations: 22.476 GiB, 88.14% gc time)
  0.981172 seconds (2.65 k allocations: 3.197 GiB, 1.89% gc time)
tracking cell 2
  2.033229 seconds (15.11 M allocations: 2.831 GiB, 45.97% gc time)
Extracting nucleus
 24.043079 seconds (323.12 k allocations: 22.290 GiB, 87.88% gc time)
  0.788415 seconds (2.65 k allocations: 3.242 GiB, 1.78% gc time)
tracking cell 3
  1.349773 seconds (5.89 M allocations: 1.732 GiB, 19.87% gc time)
Extracting nucleus
 22.693194 seconds (321.44 k allocations: 22.089 GiB, 88.47% gc time)
  0.807664 seconds (2.65 k allocations: 3.265 GiB, 1.70% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T04:09:25.545 Loading 55
198.051474 seconds (12.78 k allocations: 22.084 GiB, 1.12% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 59.800214 seconds (924.98 M allocations: 69.682 GiB, 59.54% gc time)
Finding connected component
  7.610697 seconds (486 allocations: 4.728 GiB, 0.27% gc time)
Detecting contacted branch
  4.086285 seconds (62.28 k allocations: 28.373 GiB, 18.65% gc time)
Found contacted branch: [10, 12, 30, 44, 45]
Splitting branch 10 now
Finding connected component
Reassigning contacted branch 10 
Branch 10 -> 100
Splitting branch 12 now
Finding connected component
Reassigning contacted branch 12 
Branch 12 -> 101
Splitting branch 30 now
Finding connected component
Reassigning contacted branch 30 
Splitting branch 44 now
Finding connected component
Reassigning contacted branch 44 
Splitting branch 45 now
Finding connected component
Reassigning contacted branch 45 
 59.852832 seconds (236.88 k allocations: 109.368 GiB, 9.26% gc time)
Grant domain for each detected cell by watershed
201.227453 seconds (3.20 G allocations: 135.838 GiB, 68.68% gc time)

Drawing longlived_maps
[16, 30, 44, 45, 100, 101]
207.845782 seconds (3.36 G allocations: 142.643 GiB, 67.81% gc time)
tracking cell 1
  2.864725 seconds (11.69 M allocations: 2.423 GiB, 59.52% gc time)
Extracting nucleus
 22.596008 seconds (323.23 k allocations: 22.312 GiB, 88.32% gc time)
  0.799628 seconds (2.64 k allocations: 3.200 GiB, 1.79% gc time)
tracking cell 2
  1.026290 seconds (6.36 M allocations: 1.788 GiB, 20.45% gc time)
Extracting nucleus
 25.127365 seconds (317.81 k allocations: 22.011 GiB, 89.58% gc time)
  0.815928 seconds (2.61 k allocations: 3.201 GiB, 1.66% gc time)
tracking cell 3
  1.019869 seconds (4.75 M allocations: 1.596 GiB, 17.55% gc time)
Extracting nucleus
 17.135146 seconds (317.75 k allocations: 22.028 GiB, 83.38% gc time)
  0.800565 seconds (2.61 k allocations: 3.191 GiB, 1.94% gc time)
tracking cell 4
  1.917425 seconds (13.98 M allocations: 2.697 GiB, 37.76% gc time)
Extracting nucleus
 20.434441 seconds (317.53 k allocations: 22.160 GiB, 86.15% gc time)
  0.791086 seconds (2.61 k allocations: 3.217 GiB, 1.87% gc time)
tracking cell 5
  1.972267 seconds (15.40 M allocations: 2.866 GiB, 40.96% gc time)
Extracting nucleus
 19.966209 seconds (323.23 k allocations: 22.385 GiB, 86.61% gc time)
  0.802176 seconds (2.66 k allocations: 3.224 GiB, 1.83% gc time)
tracking cell 6
  4.063185 seconds (23.44 M allocations: 3.824 GiB, 66.13% gc time)
Extracting nucleus
 19.392444 seconds (323.21 k allocations: 22.462 GiB, 85.22% gc time)
  0.834750 seconds (2.65 k allocations: 3.216 GiB, 2.14% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T04:21:57.423 Loading 56
216.495393 seconds (12.78 k allocations: 22.084 GiB, 1.16% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 66.208312 seconds (924.98 M allocations: 69.682 GiB, 61.55% gc time)
Finding connected component
  7.935541 seconds (398 allocations: 4.728 GiB, 0.30% gc time)
Detecting contacted branch
  4.090949 seconds (62.09 k allocations: 28.372 GiB, 19.42% gc time)
Found contacted branch: [3, 4, 12, 19]
Splitting branch 3 now
Finding connected component
Reassigning contacted branch 3 
Splitting branch 4 now
Finding connected component
Reassigning contacted branch 4 
Branch 4 -> 100
Splitting branch 12 now
Finding connected component
Reassigning contacted branch 12 
Branch 12 -> 101
Splitting branch 19 now
Finding connected component
Reassigning contacted branch 19 
 48.598483 seconds (222.30 k allocations: 93.168 GiB, 9.26% gc time)
Grant domain for each detected cell by watershed
196.762327 seconds (3.21 G allocations: 136.118 GiB, 70.72% gc time)

Drawing longlived_maps
[1, 3, 6, 19, 100, 101]
204.601041 seconds (3.41 G allocations: 143.411 GiB, 69.89% gc time)
tracking cell 1
  1.590904 seconds (10.89 M allocations: 2.328 GiB, 26.24% gc time)
Extracting nucleus
 23.654917 seconds (323.30 k allocations: 22.166 GiB, 88.77% gc time)
  0.859996 seconds (2.65 k allocations: 3.268 GiB, 1.79% gc time)
tracking cell 2
  1.372984 seconds (7.81 M allocations: 1.960 GiB, 26.23% gc time)
Extracting nucleus
 23.979935 seconds (323.19 k allocations: 22.170 GiB, 89.32% gc time)
  0.828262 seconds (2.64 k allocations: 3.212 GiB, 1.75% gc time)
tracking cell 3
  1.702387 seconds (12.32 M allocations: 2.499 GiB, 32.37% gc time)
Extracting nucleus
 20.687107 seconds (323.13 k allocations: 22.332 GiB, 86.81% gc time)
  0.743495 seconds (2.65 k allocations: 3.193 GiB, 1.94% gc time)
tracking cell 4
  2.360920 seconds (16.30 M allocations: 2.973 GiB, 36.23% gc time)
Extracting nucleus
 21.841691 seconds (322.39 k allocations: 22.377 GiB, 87.17% gc time)
  0.844320 seconds (2.65 k allocations: 3.218 GiB, 1.77% gc time)
tracking cell 5
  2.571726 seconds (20.47 M allocations: 3.470 GiB, 49.32% gc time)
Extracting nucleus
 17.098952 seconds (323.23 k allocations: 22.433 GiB, 84.46% gc time)
  0.754244 seconds (2.65 k allocations: 3.206 GiB, 1.81% gc time)
tracking cell 6
  2.519399 seconds (19.19 M allocations: 3.318 GiB, 45.19% gc time)
Extracting nucleus
 24.920187 seconds (321.65 k allocations: 22.349 GiB, 88.37% gc time)
  0.849297 seconds (2.63 k allocations: 3.234 GiB, 1.67% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T04:34:49.336 Loading 57
187.685789 seconds (12.78 k allocations: 22.084 GiB, 1.36% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 58.760023 seconds (924.98 M allocations: 69.682 GiB, 62.50% gc time)
Finding connected component
  8.090536 seconds (515 allocations: 4.729 GiB, 0.29% gc time)
Detecting contacted branch
  4.319700 seconds (70.16 k allocations: 33.102 GiB, 18.76% gc time)
Found contacted branch: [4, 7, 11, 21, 35]
Splitting branch 4 now
Finding connected component
Reassigning contacted branch 4 
Branch 4 -> 100
Branch 4 -> 101
Splitting branch 7 now
Finding connected component
Reassigning contacted branch 7 
Splitting branch 11 now
Finding connected component
Reassigning contacted branch 11 
Branch 11 -> 102
Splitting branch 21 now
Finding connected component
Reassigning contacted branch 21 
Branch 21 -> 103
Splitting branch 35 now
Finding connected component
Reassigning contacted branch 35 
 64.322803 seconds (325.39 k allocations: 114.101 GiB, 7.88% gc time)
Grant domain for each detected cell by watershed
199.004185 seconds (3.17 G allocations: 134.366 GiB, 70.28% gc time)

Drawing longlived_maps
[7, 14, 35, 37, 100, 101, 102, 103]
206.718763 seconds (3.39 G allocations: 141.982 GiB, 69.57% gc time)
tracking cell 1
  1.943824 seconds (12.66 M allocations: 2.539 GiB, 39.33% gc time)
Extracting nucleus
 24.376605 seconds (320.14 k allocations: 22.210 GiB, 88.85% gc time)
  0.803870 seconds (2.63 k allocations: 3.214 GiB, 2.31% gc time)
tracking cell 2
  1.687222 seconds (12.03 M allocations: 2.464 GiB, 22.66% gc time)
Extracting nucleus
 17.031740 seconds (323.20 k allocations: 22.354 GiB, 84.60% gc time)
  0.792648 seconds (2.65 k allocations: 3.200 GiB, 2.18% gc time)
tracking cell 3
  2.142640 seconds (13.34 M allocations: 2.621 GiB, 32.71% gc time)
Extracting nucleus
 22.415816 seconds (320.58 k allocations: 22.239 GiB, 87.46% gc time)
  0.718792 seconds (2.63 k allocations: 3.198 GiB, 1.82% gc time)
tracking cell 4
  0.822791 seconds (4.80 M allocations: 1.602 GiB, 0.48% gc time)
Extracting nucleus
 20.298100 seconds (319.35 k allocations: 22.000 GiB, 87.38% gc time)
  1.028273 seconds (2.63 k allocations: 3.275 GiB, 1.76% gc time)
tracking cell 5
  4.283863 seconds (23.83 M allocations: 3.871 GiB, 67.93% gc time)
Extracting nucleus
 20.632400 seconds (323.40 k allocations: 22.465 GiB, 86.13% gc time)
  0.831285 seconds (2.64 k allocations: 3.287 GiB, 2.26% gc time)
tracking cell 6
  1.864146 seconds (12.38 M allocations: 2.506 GiB, 36.81% gc time)
Extracting nucleus
 18.388266 seconds (323.23 k allocations: 22.381 GiB, 85.68% gc time)
  0.802548 seconds (2.65 k allocations: 3.205 GiB, 1.96% gc time)
tracking cell 7
  2.659169 seconds (20.80 M allocations: 3.510 GiB, 51.86% gc time)
Extracting nucleus
 20.746826 seconds (323.34 k allocations: 22.456 GiB, 86.13% gc time)
  0.888992 seconds (2.65 k allocations: 3.253 GiB, 2.31% gc time)
tracking cell 8
  1.835902 seconds (14.32 M allocations: 2.737 GiB, 42.35% gc time)
Extracting nucleus
 20.971873 seconds (322.38 k allocations: 22.332 GiB, 86.72% gc time)
  0.837069 seconds (2.64 k allocations: 3.217 GiB, 2.26% gc time)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2021-03-15T04:48:28.214 Loading 58
164.362796 seconds (12.78 k allocations: 22.084 GiB, 1.43% gc time)
Load done
Applying LoG(40) at Maximum Z Projection
Done
 65.815257 seconds (924.98 M allocations: 69.682 GiB, 61.95% gc time)
Finding connected component
  8.742959 seconds (521 allocations: 4.729 GiB, 0.29% gc time)
Detecting contacted branch
  4.371443 seconds (77.48 k allocations: 37.829 GiB, 19.98% gc time)
Found contacted branch: [19, 20, 21, 24, 34]
Splitting branch 19 now
Finding connected component
Reassigning contacted branch 19 
Splitting branch 20 now
Finding connected component
Reassigning contacted branch 20 
Branch 20 -> 100
Splitting branch 21 now
Finding connected component
Reassigning contacted branch 21 
Splitting branch 24 now
Finding connected component
Reassigning contacted branch 24 
Branch 24 -> 101
Splitting branch 34 now
Finding connected component
Reassigning contacted branch 34 
 61.717935 seconds (1.03 M allocations: 118.837 GiB, 8.41% gc time)
Grant domain for each detected cell by watershed
193.393347 seconds (3.15 G allocations: 133.286 GiB, 70.40% gc time)

Drawing longlived_maps
[11, 19, 21, 26, 27, 34, 100, 101]
199.723753 seconds (3.31 G allocations: 140.147 GiB, 69.48% gc time)
tracking cell 1
  2.463777 seconds (8.84 M allocations: 2.083 GiB, 60.19% gc time)
Extracting nucleus
 35.102580 seconds (319.97 k allocations: 22.096 GiB, 92.25% gc time)
  0.857712 seconds (2.63 k allocations: 3.291 GiB, 1.71% gc time)
tracking cell 2
  2.064960 seconds (15.02 M allocations: 2.820 GiB, 37.67% gc time)
Extracting nucleus
 17.991400 seconds (323.35 k allocations: 22.370 GiB, 84.17% gc time)
  0.785387 seconds (2.65 k allocations: 3.206 GiB, 2.43% gc time)
tracking cell 3
  1.872652 seconds (13.76 M allocations: 2.671 GiB, 39.10% gc time)
Extracting nucleus
 17.794391 seconds (323.23 k allocations: 22.356 GiB, 84.05% gc time)
  0.753543 seconds (2.65 k allocations: 3.213 GiB, 1.67% gc time)
tracking cell 4
  0.979964 seconds (6.50 M allocations: 1.804 GiB, 0.40% gc time)
Extracting nucleus
 16.945621 seconds (322.94 k allocations: 22.116 GiB, 85.45% gc time)
  0.825588 seconds (2.64 k allocations: 3.211 GiB, 2.38% gc time)
tracking cell 5
  2.159275 seconds (18.28 M allocations: 3.210 GiB, 42.42% gc time)
Extracting nucleus
 20.875480 seconds (323.24 k allocations: 22.426 GiB, 86.86% gc time)
  0.773670 seconds (2.65 k allocations: 3.211 GiB, 1.79% gc time)
tracking cell 6
  1.767148 seconds (13.57 M allocations: 2.647 GiB, 41.53% gc time)
Extracting nucleus
 23.420449 seconds (322.48 k allocations: 22.278 GiB, 88.47% gc time)
  0.797443 seconds (2.64 k allocations: 3.202 GiB, 2.34% gc time)
tracking cell 7
  1.859235 seconds (13.04 M allocations: 2.584 GiB, 41.53% gc time)
Extracting nucleus
 19.859829 seconds (321.84 k allocations: 22.304 GiB, 86.57% gc time)
  0.799138 seconds (2.63 k allocations: 3.198 GiB, 2.38% gc time)
tracking cell 8
  1.394639 seconds (10.03 M allocations: 2.226 GiB, 32.10% gc time)
Extracting nucleus
 20.353718 seconds (323.21 k allocations: 22.287 GiB, 86.66% gc time)
  0.799600 seconds (2.65 k allocations: 3.204 GiB, 1.77% gc time)