#!/usr/bin/env python # # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ # # # # CitcomS.py by Eh Tan, Eun-seo Choi, and Pururav Thoutireddy. # Copyright (C) 2002-2005, California Institute of Technology. # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation; either version 2 of the License, or # (at your option) any later version. # # This program is distributed in the hope that it will be useful, # but WITHOUT ANY WARRANTY; without even the implied warranty of # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the # GNU General Public License for more details. # # You should have received a copy of the GNU General Public License # along with this program; if not, write to the Free Software # Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA # # # # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ # ''' Combine Citcom Surface Data usage: batchsurf.py machinefile modeldir modelname timestep nodex nodey nodez n_surf_proc nprocx nprocy nprocz ''' if __name__ == '__main__': import sys, os if not len(sys.argv) == 12: print __doc__ sys.exit(1) machinefile = sys.argv[1] modeldir = sys.argv[2] modelname = sys.argv[3] timestep = int(sys.argv[4]) nodex = int(sys.argv[5]) nodey = int(sys.argv[6]) nodez = int(sys.argv[7]) ncap = int(sys.argv[8]) nprocx = int(sys.argv[9]) nprocy = int(sys.argv[10]) nprocz = int(sys.argv[11]) # generate a string of machine names from batchcombine import machinefile2nodes totalnodes = nprocx * nprocy * nprocz * ncap nodes = machinefile2nodes(machinefile, totalnodes) # extract machines at the surface tmp = nodes.split()[(nprocz-1)::nprocz] nodes = ' '.join(tmp) # get coordinate, if necessary coord_exist = True for n in range(totalnodes): coord_file = '%(modelname)s.coord.%(n)d' % vars() coord_exist &= os.path.exists(coord_file) if not coord_exist: cmd = 'getcoord.sh %(modeldir)s %(modelname)s %(nprocz)d %(nodes)s' % vars() print cmd os.system(cmd) # get surf data cmd = 'getsurf.sh %(modeldir)s %(modelname)s %(timestep)d %(nprocz)d %(nodes)s' % vars() print cmd os.system(cmd) # combine cmd = 'combinesurf.py %(modelname)s %(timestep)d %(nodex)d %(nodey)d %(nodez)d %(ncap)d %(nprocx)d %(nprocy)d %(nprocz)d' % vars() print cmd os.system(cmd) # delete modelname.surf.* files, only if the originial data is not # stored in the current directory, ie. if velofile exists velofile = '%(modelname)s.velo.0.%(timestep)d' % vars() if not os.path.exists(velofile): cmd = 'rm %(modelname)s.surf.[0-9]*.%(timestep)d' % vars() print cmd os.system(cmd) # create .general file cmd = 'dxgeneralsurf.sh %(modelname)s.surf[0-9]*.%(timestep)d' % vars() print cmd os.system(cmd) # version # $Id$ # End of file