FROM igwn/base:el8

ADD docker/etc/profile.d/pycbc.sh /etc/profile.d/pycbc.sh
ADD docker/etc/profile.d/pycbc.csh /etc/profile.d/pycbc.csh
ADD docker/etc/cvmfs/default.local /etc/cvmfs/default.local
ADD docker/etc/cvmfs/60-osg.conf /etc/cvmfs/60-osg.conf
ADD docker/etc/cvmfs/config-osg.opensciencegrid.org.conf /etc/cvmfs/config-osg.opensciencegrid.org.conf

# Set up extra repositories
RUN dnf -y install https://ecsft.cern.ch/dist/cvmfs/cvmfs-release/cvmfs-release-latest.noarch.rpm && dnf -y install cvmfs cvmfs-config-default && dnf clean all && dnf makecache && \
    dnf -y groupinstall "Development Tools" \
                        "Scientific Support" && \
    rpm -e --nodeps git perl-Git && dnf -y install @python39 rsync zlib-devel libpng-devel libjpeg-devel sqlite-devel openssl-devel fftw-libs-single fftw-devel fftw fftw-libs-long fftw-libs fftw-libs-double gsl gsl-devel hdf5 hdf5-devel python39-devel swig which osg-ca-certs && python3.9 -m pip install --upgrade pip setuptools wheel cython && python3.9 -m pip install mkl ipython jupyter jupyterhub jupyterlab lalsuite && \
    dnf -y install https://repo.opensciencegrid.org/osg/3.5/el8/testing/x86_64/osg-wn-client-3.5-5.osg35.el8.noarch.rpm && dnf clean all

# set up environment
RUN cd / && \
    mkdir -p /cvmfs/config-osg.opensciencegrid.org /cvmfs/software.igwn.org /cvmfs/gwosc.osgstorage.org && echo "config-osg.opensciencegrid.org /cvmfs/config-osg.opensciencegrid.org cvmfs ro,noauto 0 0" >> /etc/fstab && echo "software.igwn.org /cvmfs/software.igwn.org cvmfs ro,noauto 0 0" >> /etc/fstab && echo "gwosc.osgstorage.org /cvmfs/gwosc.osgstorage.org cvmfs ro,noauto 0 0" >> /etc/fstab && mkdir -p /oasis /scratch /projects /usr/lib64/slurm /var/run/munge && \
    groupadd -g 1000 pycbc && useradd -u 1000 -g 1000 -d /opt/pycbc -k /etc/skel -m -s /bin/bash pycbc

# Install MPI software needed for pycbc_inference
# at the end.
RUN dnf -y install libibverbs libibverbs-devel libibmad libibmad-devel libibumad libibumad-devel librdmacm librdmacm-devel libmlx5 libmlx4 openmpi openmpi-devel && \
    python3.9 -m pip install schwimmbad && \
    MPICC=/lib64/openmpi/bin/mpicc CFLAGS='-I /usr/include/openmpi-x86_64/ -L /usr/lib64/openmpi/lib/ -lmpi' python3.9 -m pip install --no-cache-dir mpi4py
RUN echo "/usr/lib64/openmpi/lib/" > /etc/ld.so.conf.d/openmpi.conf

# Now update all of our library installations
RUN rm -f /etc/ld.so.cache && /sbin/ldconfig

# Make python be what we want
RUN alternatives --set python /usr/bin/python3.9

# Explicitly set the path so that it is not inherited from build the environment
ENV PATH "/usr/local/bin:/usr/bin:/bin:/lib64/openmpi/bin/bin"

# Set the default LAL_DATA_PATH to point at CVMFS first, then the container.
# Users wanting it to point elsewhere should start docker using:
#   docker <cmd> -e LAL_DATA_PATH="/my/new/path"
ENV LAL_DATA_PATH "/cvmfs/software.igwn.org/pycbc/lalsuite-extra/current/share/lalsimulation:/opt/pycbc/pycbc-software/share/lal-data"

# When the container is started with
#   docker run -it pycbc/pycbc-el8:latest
# the default is to start a loging shell as the pycbc user.
# This can be overridden to log in as root with
#   docker run -it pycbc/pycbc-el8:latest /bin/bash -l
CMD ["/bin/su", "-l", "pycbc"]