misc.cc
// -*- C++ -*-
//
//~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
//
//<LicenseText>
//=====================================================================
//
// CitcomS.py
// ---------------------------------
//
// Authors:
// Eh Tan, Eun-seo Choi, and Pururav Thoutireddy
// (c) California Institute of Technology 2002-2005
//
// By downloading and/or installing this software you have
// agreed to the CitcomS.py-LICENSE bundled with this software.
// Free for non-commercial academic research ONLY.
// This program is distributed WITHOUT ANY WARRANTY whatsoever.
//
//=====================================================================
//
// Copyright June 2005, by the California Institute of Technology.
// ALL RIGHTS RESERVED. United States Government Sponsorship Acknowledged.
//
// Any commercial use must be negotiated with the Office of Technology
// Transfer at the California Institute of Technology. This software
// may be subject to U.S. export control laws and regulations. By
// accepting this software, the user agrees to comply with all
// applicable U.S. export laws and regulations, including the
// International Traffic and Arms Regulations, 22 C.F.R. 120-130 and
// the Export Administration Regulations, 15 C.F.R. 730-744. User has
// the responsibility to obtain export licenses, or other export
// authority as may be required before exporting such information to
// foreign countries or providing access to foreign nationals. In no
// event shall the California Institute of Technology be liable to any
// party for direct, indirect, special, incidental or consequential
// damages, including lost profits, arising out of the use of this
// software and its documentation, even if the California Institute of
// Technology has been advised of the possibility of such damage.
//
// The California Institute of Technology specifically disclaims any
// warranties, including the implied warranties or merchantability and
// fitness for a particular purpose. The software and documentation
// provided hereunder is on an "as is" basis, and the California
// Institute of Technology has no obligations to provide maintenance,
// support, updates, enhancements or modifications.
//
//=====================================================================
//</LicenseText>
//
//~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
//
#include <portinfo>
#include <Python.h>
#include "exceptions.h"
#include "misc.h"
extern "C" {
#include "mpi.h"
#include "global_defs.h"
#include "citcom_init.h"
#include "advection_diffusion.h"
double return1_test();
void read_instructions(struct All_variables*, char*);
double CPU_time0();
void global_default_values(struct All_variables*);
void parallel_process_termination();
void read_mat_from_file(struct All_variables*);
void read_velocity_boundary_from_file(struct All_variables*);
void set_signal();
void tracer_advection(struct All_variables*);
void velocities_conform_bcs(struct All_variables*, double **);
}
#include "mpi/Communicator.h"
#include "mpi/Group.h"
// copyright
char pyCitcom_copyright__doc__[] = "";
char pyCitcom_copyright__name__[] = "copyright";
static char pyCitcom_copyright_note[] =
"CitcomS python module: Copyright (c) 1998-2003 California Institute of Technology";
PyObject * pyCitcom_copyright(PyObject *, PyObject *)
{
return Py_BuildValue("s", pyCitcom_copyright_note);
}
//////////////////////////////////////////////////////////////////////////
// This section is for testing or temporatory implementation
//////////////////////////////////////////////////////////////////////////
char pyCitcom_return1_test__doc__[] = "";
char pyCitcom_return1_test__name__[] = "return1_test";
PyObject * pyCitcom_return1_test(PyObject *, PyObject *)
{
double a;
a = return1_test();
return Py_BuildValue("d", a);
}
char pyCitcom_read_instructions__doc__[] = "";
char pyCitcom_read_instructions__name__[] = "read_instructions";
PyObject * pyCitcom_read_instructions(PyObject *self, PyObject *args)
{
PyObject *obj;
char *filename;
if (!PyArg_ParseTuple(args, "Os:read_instructions", &obj, &filename))
return NULL;
struct All_variables* E = static_cast<struct All_variables*>(PyCObject_AsVoidPtr(obj));
read_instructions(E, filename);
// test
fprintf(stderr,"output file prefix: %s\n", E->control.data_file);
Py_INCREF(Py_None);
return Py_None;
}
char pyCitcom_CPU_time__doc__[] = "";
char pyCitcom_CPU_time__name__[] = "CPU_time";
PyObject * pyCitcom_CPU_time(PyObject *, PyObject *)
{
return Py_BuildValue("d", CPU_time0());
}
//////////////////////////////////////////////////////////////////////////
// This section is for finished implementation
//////////////////////////////////////////////////////////////////////////
char pyCitcom_citcom_init__doc__[] = "";
char pyCitcom_citcom_init__name__[] = "citcom_init";
PyObject * pyCitcom_citcom_init(PyObject *self, PyObject *args)
{
PyObject *Obj;
if (!PyArg_ParseTuple(args, "O:citcom_init", &Obj))
return NULL;
mpi::Communicator * comm = (mpi::Communicator *) PyCObject_AsVoidPtr(Obj);
if (comm == NULL)
return PyErr_Format(pyCitcom_runtimeError,
"%s: 'mpi::Communicator *' argument is null",
pyCitcom_citcom_init__name__);
MPI_Comm world = comm->handle();
// Allocate global pointer E
struct All_variables* E = citcom_init(&world);
// if E is NULL, raise an exception here.
if (E == NULL)
return PyErr_Format(pyCitcom_runtimeError,
"%s: 'libCitcomSCommon.citcom_init' failed",
pyCitcom_citcom_init__name__);
PyObject *cobj = PyCObject_FromVoidPtr(E, NULL);
return Py_BuildValue("O", cobj);
}
char pyCitcom_global_default_values__doc__[] = "";
char pyCitcom_global_default_values__name__[] = "global_default_values";
PyObject * pyCitcom_global_default_values(PyObject *, PyObject *args)
{
PyObject *obj;
if (!PyArg_ParseTuple(args, "O:global_default_values", &obj))
return NULL;
struct All_variables* E = static_cast<struct All_variables*>(PyCObject_AsVoidPtr(obj));
global_default_values(E);
Py_INCREF(Py_None);
return Py_None;
}
char pyCitcom_set_signal__doc__[] = "";
char pyCitcom_set_signal__name__[] = "set_signal";
PyObject * pyCitcom_set_signal(PyObject *, PyObject *)
{
set_signal();
Py_INCREF(Py_None);
return Py_None;
}
char pyCitcom_velocities_conform_bcs__doc__[] = "";
char pyCitcom_velocities_conform_bcs__name__[] = "velocities_conform_bcs";
PyObject * pyCitcom_velocities_conform_bcs(PyObject *self, PyObject *args)
{
PyObject *obj;
if (!PyArg_ParseTuple(args, "O:velocities_conform_bcs", &obj))
return NULL;
struct All_variables* E = static_cast<struct All_variables*>(PyCObject_AsVoidPtr(obj));
velocities_conform_bcs(E, E->U);
Py_INCREF(Py_None);
return Py_None;
}
char pyCitcom_BC_update_plate_velocity__doc__[] = "";
char pyCitcom_BC_update_plate_velocity__name__[] = "BC_update_plate_velocity";
PyObject * pyCitcom_BC_update_plate_velocity(PyObject *self, PyObject *args)
{
PyObject *obj;
if (!PyArg_ParseTuple(args, "O:BC_update_plate_velocity", &obj))
return NULL;
struct All_variables* E = static_cast<struct All_variables*>(PyCObject_AsVoidPtr(obj));
if(E->control.vbcs_file==1)
read_velocity_boundary_from_file(E);
Py_INCREF(Py_None);
return Py_None;
}
char pyCitcom_Tracer_tracer_advection__doc__[] = "";
char pyCitcom_Tracer_tracer_advection__name__[] = "Tracer_tracer_advection";
PyObject * pyCitcom_Tracer_tracer_advection(PyObject *self, PyObject *args)
{
PyObject *obj;
if (!PyArg_ParseTuple(args, "O:Tracer_tracer_advection", &obj))
return NULL;
struct All_variables* E = static_cast<struct All_variables*>(PyCObject_AsVoidPtr(obj));
if(E->control.tracer==1)
tracer_advection(E);
Py_INCREF(Py_None);
return Py_None;
}
char pyCitcom_Visc_update_material__doc__[] = "";
char pyCitcom_Visc_update_material__name__[] = "Visc_update_material";
PyObject * pyCitcom_Visc_update_material(PyObject *self, PyObject *args)
{
PyObject *obj;
if (!PyArg_ParseTuple(args, "O:Visc_update_material", &obj))
return NULL;
struct All_variables* E = static_cast<struct All_variables*>(PyCObject_AsVoidPtr(obj));
if(E->control.mat_control==1)
read_mat_from_file(E);
Py_INCREF(Py_None);
return Py_None;
}
//////////////////////////////////////////////////////////////////////////
//////////////////////////////////////////////////////////////////////////
// version
// $Id: misc.cc,v 1.26.2.1 2005/07/23 01:09:45 leif Exp $
// End of file