parameters_bak.json
{
"seed_val": 42,
"areas": {
"EC": {
"E": {
"N": 10000,
"type": "PyCAN",
"noise": 0.0
},
"I": {
"N": 1000,
"type": "Inh",
"noise": 0.0
}
},
"DG": {
"E": {
"N": 10000,
"type": "Py",
"noise": 0.0
},
"I": {
"N": 100,
"type": "Inh",
"noise": 0.0
}
},
"CA3": {
"E": {
"N": 1000,
"type": "PyCAN",
"noise": 0.0
},
"I": {
"N": 100,
"type": "Inh",
"noise": 0.0
}
},
"CA1": {
"E": {
"N": 10000,
"type": "PyCAN",
"noise": 0.0
},
"I": {
"N": 1000,
"type": "Inh",
"noise": 0.0
}
}
},
"Kuramoto": {
"N": 200,
"f0": 6.0,
"sigma": 0.5,
"kN": 20,
"gain_reset": 1.5,
"gain_rhythm": 0.4,
"offset": 0.0
},
"connectivity": {
"intra": {
"EC": [
[
0.0,
0.37
],
[
0.54,
0.0
]
],
"DG": [
[
0.0,
0.06
],
[
0.14,
0.0
]
],
"CA3": [
[
0.56,
0.75
],
[
0.75,
0.0
]
],
"CA1": [
[
0.0,
0.28
],
[
0.3,
0.7
]
]
},
"inter": {
"p_tri": 0.45,
"p_mono": 0.3
},
"inter_custom": {
"EC": {
"E": [
[
0.0,
0.0
],
[
3.0,
3.0
],
[
0.15,
0.15
],
[
1.5,
1.5
]
],
"I": [
[
0.0,
0.0
],
[
0.0,
0.0
],
[
0.0,
0.0
],
[
0.0,
0.0
]
]
},
"DG": {
"E": [
[
0.0,
0.0
],
[
0.0,
0.0
],
[
0.15,
0.15
],
[
0.0,
0.0
]
],
"I": [
[
0.0,
0.0
],
[
0.0,
0.0
],
[
0.0,
0.0
],
[
0.0,
0.0
]
]
},
"CA3": {
"E": [
[
0.0,
0.0
],
[
0.0,
0.0
],
[
0.0,
0.0
],
[
1.5,
1.5
]
],
"I": [
[
0.0,
0.0
],
[
0.0,
0.0
],
[
0.0,
0.0
],
[
0.0,
0.0
]
]
},
"CA1": {
"E": [
[
0.15,
0.15
],
[
0.0,
0.0
],
[
0.0,
0.0
],
[
0.0,
0.0
]
],
"I": [
[
0.0,
0.0
],
[
0.0,
0.0
],
[
0.0,
0.0
],
[
0.0,
0.0
]
]
}
}
},
"synapses": {
"gmax_e": 600.0,
"gmax_i": 60.0
},
"stimulation": {
"target": "CA1",
"coordinates": [
5.0,
-8.0,
7.5
],
"rho": 1.0,
"duration": 2.0,
"dt": 0.0001,
"onset": 0.5,
"I": [
0.0
],
"pulse_width": [
0.001
],
"stim_freq": 5,
"pulse_freq": 100,
"nr_of_trains": 1,
"nr_of_pulses": 1,
"ipi": 0.0001
},
"simulation": {
"duration": 1.0,
"dt": 0.0001,
"debugging": false
},
"git_short_hash": "da2e8b1",
"timestamp": "Tue Apr 5 14:38:21 2022",
"git_branch": "tuning_params",
"git_hash": "da2e8b1b8599f010bb9d14d9435d176fad8ea666"
}