#!/usr/bin/env python # # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ # # #===================================================================== # # CitcomS.py # --------------------------------- # # Authors: # Eh Tan, Eun-seo Choi, and Pururav Thoutireddy # (c) California Institute of Technology 2002-2005 # # By downloading and/or installing this software you have # agreed to the CitcomS.py-LICENSE bundled with this software. # Free for non-commercial academic research ONLY. # This program is distributed WITHOUT ANY WARRANTY whatsoever. # #===================================================================== # # Copyright June 2005, by the California Institute of Technology. # ALL RIGHTS RESERVED. United States Government Sponsorship Acknowledged. # # Any commercial use must be negotiated with the Office of Technology # Transfer at the California Institute of Technology. This software # may be subject to U.S. export control laws and regulations. By # accepting this software, the user agrees to comply with all # applicable U.S. export laws and regulations, including the # International Traffic and Arms Regulations, 22 C.F.R. 120-130 and # the Export Administration Regulations, 15 C.F.R. 730-744. User has # the responsibility to obtain export licenses, or other export # authority as may be required before exporting such information to # foreign countries or providing access to foreign nationals. In no # event shall the California Institute of Technology be liable to any # party for direct, indirect, special, incidental or consequential # damages, including lost profits, arising out of the use of this # software and its documentation, even if the California Institute of # Technology has been advised of the possibility of such damage. # # The California Institute of Technology specifically disclaims any # warranties, including the implied warranties or merchantability and # fitness for a particular purpose. The software and documentation # provided hereunder is on an "as is" basis, and the California # Institute of Technology has no obligations to provide maintenance, # support, updates, enhancements or modifications. # #===================================================================== # # # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ '''Automatically find the input parameters from CitcomS input file and run 'batchcombine.py' usage: autocombine.py machinefile inputfile step1 [step2 [...] ] ''' if __name__ == '__main__': import sys, os if len(sys.argv) < 4: print __doc__ sys.exit(1) machinefile = sys.argv[1] inputfile = sys.argv[2] # parse input from parser import Parser parser = Parser() parser.read(inputfile) datafile = parser.getstr('datafile') import os.path modeldir, modelname = os.path.split(datafile) modeldir = os.path.abspath(modeldir) #print modeldir, modelname nodex = parser.getint('nodex') nodey = parser.getint('nodey') nodez = parser.getint('nodez') ncap = parser.getint('nproc_surf') nprocx = parser.getint('nprocx') nprocy = parser.getint('nprocy') nprocz = parser.getint('nprocz') import batchcombine as combine totalnodes = nprocx * nprocy * nprocz * ncap nodelist = combine.machinefile2nodes(machinefile, totalnodes) for timestep in sys.argv[3:]: combine.combine(nodelist, modeldir, modelname, int(timestep), nodex, nodey, nodez, ncap, nprocx, nprocy, nprocz)