https://gitlab.opengeosys.org/ogs/ogs.git
Tip revision: 0d8e0cb0d00933663e03db3daee3172ca79d5d23 authored by Dmitry Yu. Naumov on 16 March 2021, 07:02:19 UTC
Merge branch 'ReplaceBoostAny' into 'master'
Merge branch 'ReplaceBoostAny' into 'master'
Tip revision: 0d8e0cb
TestGaussLegendreIntegration.cpp
/**
* \file
* \copyright
* Copyright (c) 2012-2021, OpenGeoSys Community (http://www.opengeosys.org)
* Distributed under a Modified BSD License.
* See accompanying file LICENSE.txt or
* http://www.opengeosys.org/project/license
*/
#include <gtest/gtest.h>
#include <cmath>
#include <limits>
#include "InfoLib/TestInfo.h"
#include "MathLib/Integration/GaussLegendreTet.h"
#include "MeshLib/Elements/Element.h"
#include "MeshLib/IO/VtkIO/VtuInterface.h"
#include "MeshLib/MeshSubset.h"
#include "NumLib/DOF/LocalToGlobalIndexMap.h"
#include "NumLib/Fem/InitShapeMatrices.h"
#include "NumLib/Fem/ShapeMatrixPolicy.h"
#include "ProcessLib/Utils/CreateLocalAssemblers.h"
#include "Tests/VectorUtils.h"
namespace GaussLegendreTest
{
template <typename Shp>
static std::array<double, 3> interpolateNodeCoordinates(
MeshLib::Element const& e, Shp const& N)
{
std::array<double, 3> res;
auto const* const nodes = e.getNodes();
auto node_coords = N;
for (std::size_t d = 0; d < 3; ++d)
{
for (unsigned ip = 0; ip < N.size(); ++ip)
{
node_coords[ip] = (*nodes[ip])[d];
}
res[d] = N.dot(node_coords);
}
return res;
}
class LocalAssemblerDataInterface
{
public:
using Function = std::function<double(std::array<double, 3> const&)>;
virtual double integrate(Function const& f,
unsigned const integration_order) const = 0;
virtual ~LocalAssemblerDataInterface() = default;
};
template <typename ShapeFunction, typename IntegrationMethod,
unsigned GlobalDim>
class LocalAssemblerData : public LocalAssemblerDataInterface
{
using ShapeMatricesType = ShapeMatrixPolicyType<ShapeFunction, GlobalDim>;
using ShapeMatrices = typename ShapeMatricesType::ShapeMatrices;
public:
LocalAssemblerData(MeshLib::Element const& e,
std::size_t const /*local_matrix_size*/,
bool is_axially_symmetric,
unsigned const /*integration_order*/)
: _e(e)
{
if (is_axially_symmetric)
{
OGS_FATAL("Only testing Cartesian meshes!");
}
}
double integrate(const Function& f,
unsigned const integration_order) const override
{
double integral = 0;
auto const sms =
NumLib::initShapeMatrices<ShapeFunction, ShapeMatricesType,
GlobalDim>(
_e, false /*is_axially_symmetric*/,
IntegrationMethod{integration_order});
IntegrationMethod integration_method{integration_order};
for (unsigned ip = 0; ip < sms.size(); ++ip)
{
// We need to assert that detJ is constant in each element in order
// to be sure that in every element that we are integrating over the
// effective polynomial degree is the one we expect.
EXPECT_NEAR(sms[0].detJ, sms[ip].detJ,
std::numeric_limits<double>::epsilon());
auto const& N = sms[ip].N;
auto const coords = interpolateNodeCoordinates(_e, N);
auto const function_value = f(coords);
integral += function_value * sms[ip].detJ *
integration_method.getWeightedPoint(ip).getWeight();
}
return integral;
}
private:
MeshLib::Element const& _e;
};
class IntegrationTestProcess
{
public:
using LocalAssembler = LocalAssemblerDataInterface;
IntegrationTestProcess(MeshLib::Mesh const& mesh,
unsigned const integration_order)
: _integration_order(integration_order),
_mesh_subset_all_nodes(mesh, mesh.getNodes())
{
std::vector<MeshLib::MeshSubset> all_mesh_subsets{
_mesh_subset_all_nodes};
_dof_table = std::make_unique<NumLib::LocalToGlobalIndexMap>(
std::move(all_mesh_subsets), NumLib::ComponentOrder::BY_COMPONENT);
// createAssemblers(mesh);
ProcessLib::createLocalAssemblers<LocalAssemblerData>(
mesh.getDimension(), mesh.getElements(), *_dof_table, 1,
_local_assemblers, mesh.isAxiallySymmetric(), _integration_order);
}
double integrate(LocalAssembler::Function const& f) const
{
double integral = 0;
for (auto const& la : _local_assemblers)
{
integral += la->integrate(f, _integration_order);
}
return integral;
}
private:
unsigned const _integration_order;
MeshLib::MeshSubset _mesh_subset_all_nodes;
std::unique_ptr<NumLib::LocalToGlobalIndexMap> _dof_table;
std::vector<std::unique_ptr<LocalAssembler>> _local_assemblers;
};
struct FBase
{
private:
static std::vector<double> initCoeffs(std::size_t const num_coeffs)
{
std::vector<double> cs(num_coeffs);
fillVectorRandomly(cs);
return cs;
}
public:
explicit FBase(std::size_t const num_coeffs)
: coeffs(initCoeffs(num_coeffs))
{
}
virtual double operator()(
std::array<double, 3> const& /*coords*/) const = 0;
virtual double getAnalyticalIntegralOverUnitCube() const = 0;
LocalAssemblerDataInterface::Function getClosure() const
{
return [this](std::array<double, 3> const& coords) {
return this->operator()(coords);
};
}
virtual ~FBase() = default;
std::vector<double> const coeffs;
};
struct FConst final : FBase
{
FConst() : FBase(1) {}
double operator()(std::array<double, 3> const& /*unused*/) const override
{
return coeffs[0];
}
double getAnalyticalIntegralOverUnitCube() const override
{
return coeffs[0];
}
};
struct FLin final : FBase
{
FLin() : FBase(4) {}
double operator()(std::array<double, 3> const& coords) const override
{
auto const x = coords[0];
auto const y = coords[1];
auto const z = coords[2];
return coeffs[0] + coeffs[1] * x + coeffs[2] * y + coeffs[3] * z;
}
double getAnalyticalIntegralOverUnitCube() const override
{
return coeffs[0];
}
};
struct FQuad final : FBase
{
FQuad() : FBase(10) {}
double operator()(std::array<double, 3> const& coords) const override
{
auto const x = coords[0];
auto const y = coords[1];
auto const z = coords[2];
return coeffs[0] + coeffs[1] * x + coeffs[2] * y + coeffs[3] * z +
coeffs[4] * x * y + coeffs[5] * y * z + coeffs[6] * z * x +
coeffs[7] * x * x + coeffs[8] * y * y + coeffs[9] * z * z;
}
double getAnalyticalIntegralOverUnitCube() const override
{
double const a = -.5;
double const b = .5;
double const a3 = a * a * a;
double const b3 = b * b * b;
return coeffs[0] + (coeffs[7] + coeffs[8] + coeffs[9]) * (b3 - a3) / 3.;
}
};
struct F3DSeparablePolynomial final : FBase
{
explicit F3DSeparablePolynomial(unsigned polynomial_degree)
: FBase(3 * polynomial_degree + 3), _degree(polynomial_degree)
{
}
// f(x, y, z) = g(x) * h(y) * i(z)
double operator()(std::array<double, 3> const& coords) const override
{
double res = 1.0;
for (unsigned d : {0, 1, 2})
{
auto const x = coords[d];
double poly = 0.0;
for (unsigned n = 0; n <= _degree; ++n)
{
poly += coeffs[n + d * (_degree + 1)] * std::pow(x, n);
}
res *= poly;
}
return res;
}
// [ F(x, y, z) ]_a^b = [ G(x) ]_a^b * [ H(y) ]_a^b * [ I(z) ]_a^b
double getAnalyticalIntegralOverUnitCube() const override
{
double const a = -.5;
double const b = .5;
double res = 1.0;
for (unsigned d : {0, 1, 2})
{
double poly = 0.0;
for (unsigned n = 0; n <= _degree; ++n)
{
poly += coeffs[n + d * (_degree + 1)] *
(std::pow(b, n + 1) - std::pow(a, n + 1)) / (n + 1);
}
res *= poly;
}
return res;
}
private:
unsigned const _degree;
};
unsigned binomial_coefficient(unsigned n, unsigned k)
{
EXPECT_GE(n, k);
unsigned res = 1;
for (unsigned i = n; i > k; --i)
{
res *= i;
}
for (unsigned i = n - k; i > 0; --i)
{
res /= i;
}
return res;
}
/* This function is a polynomial where for each monomial a_ijk x^i y^j z^k
* holds: i + j + k <= n, where n is the overall polynomial degree
*/
struct F3DNonseparablePolynomial final : FBase
{
// The number of coefficients/monomials are obtained as follows: Compute the
// number of combinations with repititions when drawing
// polynomial_degree times from the set { x, y, z, 1 }
explicit F3DNonseparablePolynomial(unsigned polynomial_degree)
: FBase(binomial_coefficient(4 + polynomial_degree - 1, 4 - 1)),
_degree(polynomial_degree)
{
}
double operator()(std::array<double, 3> const& coords) const override
{
auto const x = coords[0];
auto const y = coords[1];
auto const z = coords[2];
double res = 0.0;
unsigned index = 0;
for (unsigned x_deg = 0; x_deg <= _degree; ++x_deg)
{
for (unsigned y_deg = 0; x_deg + y_deg <= _degree; ++y_deg)
{
for (unsigned z_deg = 0; x_deg + y_deg + z_deg <= _degree;
++z_deg)
{
EXPECT_GT(coeffs.size(), index);
res += coeffs[index] * std::pow(x, x_deg) *
std::pow(y, y_deg) * std::pow(z, z_deg);
++index;
}
}
}
EXPECT_EQ(coeffs.size(), index);
return res;
}
double getAnalyticalIntegralOverUnitCube() const override
{
double const a = -.5;
double const b = .5;
double res = 0.0;
unsigned index = 0;
for (unsigned x_deg = 0; x_deg <= _degree; ++x_deg)
{
for (unsigned y_deg = 0; x_deg + y_deg <= _degree; ++y_deg)
{
for (unsigned z_deg = 0; x_deg + y_deg + z_deg <= _degree;
++z_deg)
{
EXPECT_GT(coeffs.size(), index);
res += coeffs[index] *
(std::pow(b, x_deg + 1) - std::pow(a, x_deg + 1)) /
(x_deg + 1) *
(std::pow(b, y_deg + 1) - std::pow(a, y_deg + 1)) /
(y_deg + 1) *
(std::pow(b, z_deg + 1) - std::pow(a, z_deg + 1)) /
(z_deg + 1);
++index;
}
}
}
EXPECT_EQ(coeffs.size(), index);
return res;
}
private:
unsigned const _degree;
};
std::unique_ptr<FBase> getF(unsigned polynomial_order)
{
std::vector<double> coeffs;
switch (polynomial_order)
{
case 0:
return std::make_unique<FConst>();
case 1:
return std::make_unique<FLin>();
case 2:
return std::make_unique<FQuad>();
}
OGS_FATAL("unsupported polynomial order: {:d}.", polynomial_order);
}
} // namespace GaussLegendreTest
/* *****************************************************************************
*
* The idea behind the tests in this file is to integrate polynomials of
* different degree over the unit cube.
*
* Gauss-Legendre integration should be able to exactly integrate those up to a
* certain degree.
*
* The coefficients of the tested polynomials are chosen randomly.
*
**************************************************************************** */
static double const eps = 10 * std::numeric_limits<double>::epsilon();
/* The tests in this file fundamentally rely on a mesh being read from a vtu
* file, and a DOF table being computed for that mesh. Since our PETSc build
* only works with node partitioned meshes, it cannot digest the read meshes.
*/
#ifndef USE_PETSC
#define OGS_DONT_TEST_THIS_IF_PETSC(group, test_case) TEST(group, test_case)
#else
#define OGS_DONT_TEST_THIS_IF_PETSC(group, test_case) \
TEST(group, DISABLED_##test_case)
#endif
OGS_DONT_TEST_THIS_IF_PETSC(MathLib, IntegrationGaussLegendreTet)
{
std::unique_ptr<MeshLib::Mesh> mesh_tet(
MeshLib::IO::VtuInterface::readVTUFile(TestInfoLib::TestInfo::data_path +
"/MathLib/unit_cube_tet.vtu"));
for (unsigned integration_order : {1, 2, 3})
{
DBUG("\n==== integration order: {:d}.\n", integration_order);
GaussLegendreTest::IntegrationTestProcess pcs_tet(*mesh_tet,
integration_order);
for (unsigned polynomial_order : {0, 1, 2})
{
if (polynomial_order > 2 * integration_order - 1)
{
break;
}
DBUG(" == polynomial order: {:d}.", polynomial_order);
auto f = GaussLegendreTest::getF(polynomial_order);
auto const integral_tet = pcs_tet.integrate(f->getClosure());
EXPECT_NEAR(f->getAnalyticalIntegralOverUnitCube(), integral_tet,
eps);
}
}
}
OGS_DONT_TEST_THIS_IF_PETSC(MathLib, IntegrationGaussLegendreHex)
{
std::unique_ptr<MeshLib::Mesh> mesh_hex(
MeshLib::IO::VtuInterface::readVTUFile(TestInfoLib::TestInfo::data_path +
"/MathLib/unit_cube_hex.vtu"));
for (unsigned integration_order : {1, 2, 3})
{
DBUG("\n==== integration order: {:d}.\n", integration_order);
GaussLegendreTest::IntegrationTestProcess pcs_hex(*mesh_hex,
integration_order);
for (unsigned polynomial_order : {0, 1, 2})
{
if (polynomial_order > 2 * integration_order - 1)
{
break;
}
DBUG(" == polynomial order: {:d}.", polynomial_order);
auto f = GaussLegendreTest::getF(polynomial_order);
auto const integral_hex = pcs_hex.integrate(f->getClosure());
EXPECT_NEAR(f->getAnalyticalIntegralOverUnitCube(), integral_hex,
eps);
}
}
}
// This test is disabled, because the polynomials involved are too complicated
// to be exactly integrated over tetrahedra using Gauss-Legendre quadrature
OGS_DONT_TEST_THIS_IF_PETSC(
MathLib, DISABLED_IntegrationGaussLegendreTetSeparablePolynomial)
{
std::unique_ptr<MeshLib::Mesh> mesh_tet(
MeshLib::IO::VtuInterface::readVTUFile(TestInfoLib::TestInfo::data_path +
"/MathLib/unit_cube_tet.vtu"));
for (unsigned integration_order : {1, 2, 3})
{
DBUG("\n==== integration order: {:d}.\n", integration_order);
GaussLegendreTest::IntegrationTestProcess pcs_tet(*mesh_tet,
integration_order);
for (unsigned polynomial_order = 0;
// Gauss-Legendre integration is exact up to this order!
polynomial_order < 2 * integration_order;
++polynomial_order)
{
DBUG(" == polynomial order: {:d}.", polynomial_order);
GaussLegendreTest::F3DSeparablePolynomial f(polynomial_order);
auto const integral_tet = pcs_tet.integrate(f.getClosure());
EXPECT_NEAR(f.getAnalyticalIntegralOverUnitCube(), integral_tet,
eps);
}
}
}
OGS_DONT_TEST_THIS_IF_PETSC(MathLib,
IntegrationGaussLegendreHexSeparablePolynomial)
{
std::unique_ptr<MeshLib::Mesh> mesh_hex(
MeshLib::IO::VtuInterface::readVTUFile(TestInfoLib::TestInfo::data_path +
"/MathLib/unit_cube_hex.vtu"));
for (unsigned integration_order : {1, 2, 3, 4})
{
DBUG("\n==== integration order: {:d}.\n", integration_order);
GaussLegendreTest::IntegrationTestProcess pcs_hex(*mesh_hex,
integration_order);
for (unsigned polynomial_order = 0;
// Gauss-Legendre integration is exact up to this order!
polynomial_order < 2 * integration_order;
++polynomial_order)
{
DBUG(" == polynomial order: {:d}.", polynomial_order);
GaussLegendreTest::F3DSeparablePolynomial f(polynomial_order);
auto const integral_hex = pcs_hex.integrate(f.getClosure());
EXPECT_NEAR(f.getAnalyticalIntegralOverUnitCube(), integral_hex,
eps);
}
}
}
OGS_DONT_TEST_THIS_IF_PETSC(MathLib,
IntegrationGaussLegendreTetNonSeparablePolynomial)
{
std::unique_ptr<MeshLib::Mesh> mesh_tet(
MeshLib::IO::VtuInterface::readVTUFile(TestInfoLib::TestInfo::data_path +
"/MathLib/unit_cube_tet.vtu"));
for (unsigned integration_order : {1, 2, 3})
{
DBUG("\n==== integration order: {:d}.\n", integration_order);
GaussLegendreTest::IntegrationTestProcess pcs_tet(*mesh_tet,
integration_order);
for (unsigned polynomial_order = 0;
// Gauss-Legendre integration is exact up to this order!
polynomial_order < 2 * integration_order;
++polynomial_order)
{
DBUG(" == polynomial order: {:d}.", polynomial_order);
GaussLegendreTest::F3DNonseparablePolynomial f(polynomial_order);
auto const integral_tet = pcs_tet.integrate(f.getClosure());
EXPECT_NEAR(f.getAnalyticalIntegralOverUnitCube(), integral_tet,
eps);
}
}
}
OGS_DONT_TEST_THIS_IF_PETSC(MathLib,
IntegrationGaussLegendreHexNonSeparablePolynomial)
{
std::unique_ptr<MeshLib::Mesh> mesh_hex(
MeshLib::IO::VtuInterface::readVTUFile(TestInfoLib::TestInfo::data_path +
"/MathLib/unit_cube_hex.vtu"));
for (unsigned integration_order : {1, 2, 3, 4})
{
DBUG("\n==== integration order: {:d}.\n", integration_order);
GaussLegendreTest::IntegrationTestProcess pcs_hex(*mesh_hex,
integration_order);
for (unsigned polynomial_order = 0;
// Gauss-Legendre integration is exact up to this order!
polynomial_order < 2 * integration_order;
++polynomial_order)
{
DBUG(" == polynomial order: {:d}.", polynomial_order);
GaussLegendreTest::F3DNonseparablePolynomial f(polynomial_order);
auto const integral_hex = pcs_hex.integrate(f.getClosure());
EXPECT_NEAR(f.getAnalyticalIntegralOverUnitCube(), integral_hex,
eps);
}
}
}
#undef OGS_DONT_TEST_THIS_IF_PETSC