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To reference or cite the objects present in the Software Heritage archive, permalinks based on SoftWare Hash IDentifiers (SWHIDs) must be used.
Select below a type of object currently browsed in order to display its associated SWHID and permalink.

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swh:1:cnt:ac8075ca51cca2540afdf94753ef94f0bb694697

This interface enables to generate software citations, provided that the root directory of browsed objects contains a citation.cff or codemeta.json file.
Select below a type of object currently browsed in order to generate citations for them.

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(requires biblatex-software package)
Generating citation ...
## custom
from utils import utils, vis
# from utils import poly_point_isect as bo   ##bentley-ottmann sweep line
import criteria as C
import quality as Q
# import gd2
from gd2 import GD2
import utils.weight_schedule as ws

## third party
import networkx as nx
# from PIL import Image
from natsort import natsorted

### numeric
import numpy as np
# import scipy.io as io
import torch
from torch import nn, optim
import torch.nn.functional as F

### vis
import tqdm
import matplotlib.pyplot as plt
# import matplotlib.animation as animation
# from matplotlib.colors import LinearSegmentedColormap
# from mpl_toolkits import mplot3d
# from matplotlib import collections  as mc
# from mpl_toolkits.mplot3d.art3d import Line3DCollection
plt.style.use('ggplot')
plt.style.use('seaborn-colorblind')


## sys
from collections import defaultdict
import random
import time
from glob import glob
import math
import os
from pathlib import Path
import itertools
import pickle as pkl



    



device = 'cpu'

seed = 2337
random.seed(seed)
np.random.seed(seed)
torch.manual_seed(seed)

# graph_name = 'grid_6_10'
# G = nx.grid_2d_graph(6,10)
# max_iter = int(1e4)

graph_name = 'dwt_307'
max_iter = int(1e4)
mat_dir = 'input_graphs/SuiteSparse Matrix Collection'
G = utils.load_mat(f'{mat_dir}/{graph_name}.mat')

 
criteria = ['stress', 'ideal_edge_length', 'aspect_ratio']
criteria_weights = dict(
    stress=ws.SmoothSteps([max_iter/4, max_iter], [1, 0.05]),
    ideal_edge_length=ws.SmoothSteps([0, max_iter*0.2, max_iter*0.6, max_iter], [0, 0, 0.2, 0]),
    aspect_ratio=ws.SmoothSteps([0, max_iter*0.2, max_iter*0.6, max_iter], [0, 0, 0.5, 0]),
)
criteria = list(criteria_weights.keys())

# plot_weight(criteria_weights, max_iter)
# plt.close()


sample_sizes = dict(
    stress=16,
    ideal_edge_length=16,
    neighborhood_preservation=16,
    crossings=128,
    crossing_angle_maximization=64,
    aspect_ratio=max(128, int(len(G)**0.5)),
    angular_resolution=16,
    vertex_resolution=max(256, int(len(G)**0.5)),
    gabriel=64,
)
sample_sizes = {c:sample_sizes[c] for c in criteria}




gd = GD2(G)
result = gd.optimize(
    criteria_weights=criteria_weights, 
    sample_sizes=sample_sizes,
    
    # evaluate='all',
    evaluate=set(criteria),
    
    max_iter=max_iter,
    time_limit=3600, ##sec
    
    evaluate_interval=max_iter, evaluate_interval_unit='iter',
    vis_interval=-1, vis_interval_unit='sec',
    
    clear_output=True,
    grad_clamp=20,
    criteria_kwargs = dict(
        aspect_ratio=dict(target=[1,1]),
    ),
#     optimizer_kwargs = dict(mode='Adam', lr=0.01),
    optimizer_kwargs = dict(mode='SGD', lr=2),
    scheduler_kwargs = dict(verbose=True),
)





## output 
pos = gd.pos.detach().numpy().tolist()
pos_G = {k:pos[gd.k2i[k]] for k in gd.G.nodes}

print('nodes')
for node_id, pos in pos_G.items():
    print(f'{node_id}, {pos[0]}, {pos[1]}')

print('edges')
for e in gd.G.edges:
    print(f'{e[0]}, {e[1]}')

## vis
vis.plot(
    gd.G, pos_G,
    [gd.iters, gd.loss_curve], 
    result['iter'], result['runtime'],
    criteria_weights, max_iter,
    # show=True, save=False,
    node_size=1,
    edge_width=1,
)
plt.show()

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