parm models/calcrl_64128_rec1_69c03_0.pdb
#trajin models/calcrl_1632_rec1_69c03_?.pdb
#trajin models/calcrl_1632_rec1_69c03_??.pdb
#trajin models/calcrl_3264_rec1_69c03_?.pdb
#trajin models/calcrl_3264_rec1_69c03_??.pdb
trajin models/calcrl_64128_rec1_69c03_?.pdb
trajin models/calcrl_64128_rec1_69c03_??.pdb
#trajin models/calcrl_128256_rec1_69c03_?.pdb
#trajin models/calcrl_128256_rec1_69c03_??.pdb
#trajin models/calcrl_256512_rec1_69c03_?.pdb
#trajin models/calcrl_256512_rec1_69c03_??.pdb
#trajin models/calcrl_5121024_rec1_69c03_?.pdb
#trajin models/calcrl_5121024_rec1_69c03_??.pdb
#trajin models/calcrl_5125120_rec1_69c03_?.pdb
#trajin models/calcrl_5125120_rec1_69c03_??.pdb
autoimage
rms :1-111,121-188,198-223,233-266@CA
#strip !:1-111,121-188,198-223,233-266@CA
average crdset trjavg 
average average_rmsf.pdb pdb
#createcrd CRD1
run
rms ref trjavg :1-111,121-188,198-223,233-266@CA
atomicfluct out fluct.dat :1-111,121-188,198-223,233-266@CA byres
run