## Lee & Wing 2021
### Absolute quantitation of individual SARS-CoV-2 RNA molecules: a new paradigm for infection dynamics and variant differences
This repository contains source codes for reproducing figures presented in the Lee & Wing SARS-CoV-2 smFISH manuscript [BioRxiv link](https://www.biorxiv.org/content/10.1101/2021.06.29.450133v2.full).
### Data table availability
Data tables used for figure generation can be found under `smFISH/data_plotting/data/`
### Code availability
Bigfish analysis pipeline and other codes used for the image analysis can be found under
`smFISH/analysis-codes/`
Scripts used to generate the presented figures are available in the R Markdown format under
`smFISH/data_plotting/`
### Contact
[@ilandavislab](https://twitter.com/ilandavislab)
[@McKeatingLab](https://twitter.com/McKeatingLab)
[@castello_lab](https://twitter.com/castello_lab)