Raw File
Tip revision: be5018ccd2e1a6caea7bc7628a203f6214915bcf authored by leebrianr on 02 June 2022, 15:22:55 UTC
Tip revision: be5018c
Package: patchseqtools
Type: Package
Title: QC and Cell Type Mapping for Patch-Seq data
Version: 0.0.1
Author: Jeremy Miller <>
Maintainer: Jeremy Miller <>
Description: This repository includes code for QC mapping and cell type assignments. Specific topics include:
    1) Assigning quality scores to each cell (mostly wrapper functions for
    2) Cell type mapping using tree mapping strategy (to be added later) 
    3) Cell type clustering using CCA (mostly wrapper functions for
License: What license is it under?
Encoding: UTF-8
LazyData: true
    dendextend (>= 1.7.0),
    gplots (>= 3.0.1),
    pdist (>= 1.2),
    matrixStats (>= 0.53.1),
    Rtsne (>= 0.13),
    ggplot2 (>= 2.2.1)
RoxygenNote: 6.1.0
back to top