https://github.com/cran/snowfall
Raw File
Tip revision: 9552333b71b280bfb9fc5f61f43e6fa6dffa9022 authored by Jochen Knaus on 03 October 2008, 00:00 UTC
version 1.60
Tip revision: 9552333
snowfall.log
This is pdfeTeXk, Version 3.141592-1.21a-2.2 (Web2C 7.5.4) (format=pdflatex 2007.8.21)  22 OCT 2008 11:20
entering extended mode
 file:line:error style messages enabled.
**\nonstopmode \input /dsk/home2/jo/R.cluster/snowfall/inst/doc/snowfall.tex
(/dsk/home2/jo/R.cluster/snowfall/inst/doc/snowfall.tex
(/usr/share/texmf-tetex/tex/latex/base/article.cls
Document Class: article 2004/02/16 v1.4f Standard LaTeX document class
(/usr/share/texmf-tetex/tex/latex/base/size10.clo
File: size10.clo 2004/02/16 v1.4f Standard LaTeX file (size option)
)
\c@part=\count79
\c@section=\count80
\c@subsection=\count81
\c@subsubsection=\count82
\c@paragraph=\count83
\c@subparagraph=\count84
\c@figure=\count85
\c@table=\count86
\abovecaptionskip=\skip41
\belowcaptionskip=\skip42
\bibindent=\dimen102
)
(/usr/local/share/texmf/tex/latex/html/url.sty
Package: url 1999/03/02  ver 1.4  Verb mode for urls, email addresses, and file
 names
)
(/usr/local/R/R-2.5.1/lib/R/share/texmf/Sweave.sty

LaTeX Warning: You have requested package `/usr/local/R/R-2.5.1/lib/R/share/tex
mf/Sweave',
               but the package provides `Sweave'.

Package: Sweave 
(/usr/share/texmf-tetex/tex/latex/base/ifthen.sty
Package: ifthen 2001/05/26 v1.1c Standard LaTeX ifthen package (DPC)
)
(/usr/share/texmf-tetex/tex/latex/graphics/graphicx.sty
Package: graphicx 1999/02/16 v1.0f Enhanced LaTeX Graphics (DPC,SPQR)

(/usr/share/texmf-tetex/tex/latex/graphics/keyval.sty
Package: keyval 1999/03/16 v1.13 key=value parser (DPC)
\KV@toks@=\toks14
)
(/usr/share/texmf-tetex/tex/latex/graphics/graphics.sty
Package: graphics 2001/07/07 v1.0n Standard LaTeX Graphics (DPC,SPQR)

(/usr/share/texmf-tetex/tex/latex/graphics/trig.sty
Package: trig 1999/03/16 v1.09 sin cos tan (DPC)
)
(/usr/share/texmf-tetex/tex/latex/graphics/graphics.cfg
File: graphics.cfg 2005/02/03 v1.3 graphics configuration of teTeX/TeXLive
)
Package graphics Info: Driver file: pdftex.def on input line 80.

(/usr/share/texmf-tetex/tex/latex/graphics/pdftex.def
File: pdftex.def 2002/06/19 v0.03k graphics/color for pdftex
\Gread@gobject=\count87
))
\Gin@req@height=\dimen103
\Gin@req@width=\dimen104
)
(/usr/share/texmf-tetex/tex/latex/fancyvrb/fancyvrb.sty
Package: fancyvrb 1998/07/17

Style option: `fancyvrb' v2.6, with DG/SPQR fixes <1998/07/17> (tvz)
\FV@CodeLineNo=\count88
\FV@InFile=\read1
\FV@TabBox=\box26
\c@FancyVerbLine=\count89
\FV@StepNumber=\count90
\FV@OutFile=\write3

No file fancyvrb.cfg.
) (/usr/local/R/R-2.5.1/lib/R/share/texmf/upquote.sty
Package: upquote 2003/08/11 v1.1 Covington's upright-quote modification to verb
atim and verb

(/usr/share/texmf-tetex/tex/latex/base/textcomp.sty
Package: textcomp 2004/02/22 v1.99f Standard LaTeX package
Package textcomp Info: Sub-encoding information:
(textcomp)               5 = only ISO-Adobe without \textcurrency
(textcomp)               4 = 5 + \texteuro
(textcomp)               3 = 4 + \textohm
(textcomp)               2 = 3 + \textestimated + \textcurrency
(textcomp)               1 = TS1 - \textcircled - \t
(textcomp)               0 = TS1 (full)
(textcomp)             Font families with sub-encoding setting implement
(textcomp)             only a restricted character set as indicated.
(textcomp)             Family '?' is the default used for unknown fonts.
(textcomp)             See the documentation for details.
Package textcomp Info: Setting ? sub-encoding to TS1/1 on input line 71.

(/usr/share/texmf-tetex/tex/latex/base/ts1enc.def
File: ts1enc.def 2001/06/05 v3.0e (jk/car/fm) Standard LaTeX file
)
LaTeX Info: Redefining \oldstylenums on input line 266.
Package textcomp Info: Setting cmr sub-encoding to TS1/0 on input line 281.
Package textcomp Info: Setting cmss sub-encoding to TS1/0 on input line 282.
Package textcomp Info: Setting cmtt sub-encoding to TS1/0 on input line 283.
Package textcomp Info: Setting cmvtt sub-encoding to TS1/0 on input line 284.
Package textcomp Info: Setting cmbr sub-encoding to TS1/0 on input line 285.
Package textcomp Info: Setting cmtl sub-encoding to TS1/0 on input line 286.
Package textcomp Info: Setting ccr sub-encoding to TS1/0 on input line 287.
Package textcomp Info: Setting ptm sub-encoding to TS1/4 on input line 288.
Package textcomp Info: Setting pcr sub-encoding to TS1/4 on input line 289.
Package textcomp Info: Setting phv sub-encoding to TS1/4 on input line 290.
Package textcomp Info: Setting ppl sub-encoding to TS1/3 on input line 291.
Package textcomp Info: Setting pag sub-encoding to TS1/4 on input line 292.
Package textcomp Info: Setting pbk sub-encoding to TS1/4 on input line 293.
Package textcomp Info: Setting pnc sub-encoding to TS1/4 on input line 294.
Package textcomp Info: Setting pzc sub-encoding to TS1/4 on input line 295.
Package textcomp Info: Setting bch sub-encoding to TS1/4 on input line 296.
Package textcomp Info: Setting put sub-encoding to TS1/5 on input line 297.
Package textcomp Info: Setting uag sub-encoding to TS1/5 on input line 298.
Package textcomp Info: Setting ugq sub-encoding to TS1/5 on input line 299.
Package textcomp Info: Setting ul8 sub-encoding to TS1/4 on input line 300.
Package textcomp Info: Setting ul9 sub-encoding to TS1/4 on input line 301.
Package textcomp Info: Setting augie sub-encoding to TS1/5 on input line 302.
Package textcomp Info: Setting dayrom sub-encoding to TS1/3 on input line 303.
Package textcomp Info: Setting dayroms sub-encoding to TS1/3 on input line 304.

Package textcomp Info: Setting pxr sub-encoding to TS1/0 on input line 305.
Package textcomp Info: Setting pxss sub-encoding to TS1/0 on input line 306.
Package textcomp Info: Setting pxtt sub-encoding to TS1/0 on input line 307.
Package textcomp Info: Setting txr sub-encoding to TS1/0 on input line 308.
Package textcomp Info: Setting txss sub-encoding to TS1/0 on input line 309.
Package textcomp Info: Setting txtt sub-encoding to TS1/0 on input line 310.
Package textcomp Info: Setting futs sub-encoding to TS1/4 on input line 311.
Package textcomp Info: Setting futx sub-encoding to TS1/4 on input line 312.
Package textcomp Info: Setting futj sub-encoding to TS1/4 on input line 313.
Package textcomp Info: Setting hlh sub-encoding to TS1/3 on input line 314.
Package textcomp Info: Setting hls sub-encoding to TS1/3 on input line 315.
Package textcomp Info: Setting hlst sub-encoding to TS1/3 on input line 316.
Package textcomp Info: Setting hlct sub-encoding to TS1/5 on input line 317.
Package textcomp Info: Setting hlx sub-encoding to TS1/5 on input line 318.
Package textcomp Info: Setting hlce sub-encoding to TS1/5 on input line 319.
Package textcomp Info: Setting hlcn sub-encoding to TS1/5 on input line 320.
Package textcomp Info: Setting hlcw sub-encoding to TS1/5 on input line 321.
Package textcomp Info: Setting hlcf sub-encoding to TS1/5 on input line 322.
Package textcomp Info: Setting pplx sub-encoding to TS1/3 on input line 323.
Package textcomp Info: Setting pplj sub-encoding to TS1/3 on input line 324.
Package textcomp Info: Setting ptmx sub-encoding to TS1/4 on input line 325.
Package textcomp Info: Setting ptmj sub-encoding to TS1/4 on input line 326.
))
(/usr/share/texmf-tetex/tex/latex/base/fontenc.sty
Package: fontenc 2004/02/22 v1.99f Standard LaTeX package

(/usr/share/texmf-tetex/tex/latex/base/t1enc.def
File: t1enc.def 2004/02/22 v1.99f Standard LaTeX file
LaTeX Font Info:    Redeclaring font encoding T1 on input line 43.
))
(/usr/share/texmf-tetex/tex/latex/ae/ae.sty
Package: ae 2001/02/12 1.3 Almost European Computer Modern

(/usr/share/texmf-tetex/tex/latex/base/fontenc.sty
Package: fontenc 2004/02/22 v1.99f Standard LaTeX package

(/usr/share/texmf-tetex/tex/latex/base/t1enc.def
File: t1enc.def 2004/02/22 v1.99f Standard LaTeX file
LaTeX Font Info:    Redeclaring font encoding T1 on input line 43.
)
LaTeX Font Info:    Try loading font information for T1+aer on input line 100.

(/usr/share/texmf-tetex/tex/latex/ae/t1aer.fd
File: t1aer.fd 1997/11/16 Font definitions for T1/aer.
)))) (./snowfall.aux)
\openout1 = `snowfall.aux'.

LaTeX Font Info:    Checking defaults for OML/cmm/m/it on input line 14.
LaTeX Font Info:    ... okay on input line 14.
LaTeX Font Info:    Checking defaults for T1/cmr/m/n on input line 14.
LaTeX Font Info:    ... okay on input line 14.
LaTeX Font Info:    Checking defaults for OT1/cmr/m/n on input line 14.
LaTeX Font Info:    ... okay on input line 14.
LaTeX Font Info:    Checking defaults for OMS/cmsy/m/n on input line 14.
LaTeX Font Info:    ... okay on input line 14.
LaTeX Font Info:    Checking defaults for OMX/cmex/m/n on input line 14.
LaTeX Font Info:    ... okay on input line 14.
LaTeX Font Info:    Checking defaults for U/cmr/m/n on input line 14.
LaTeX Font Info:    ... okay on input line 14.
LaTeX Font Info:    Checking defaults for TS1/cmr/m/n on input line 14.
LaTeX Font Info:    Try loading font information for TS1+cmr on input line 14.

(/usr/share/texmf-tetex/tex/latex/base/ts1cmr.fd
File: ts1cmr.fd 1999/05/25 v2.5h Standard LaTeX font definitions
)
LaTeX Font Info:    ... okay on input line 14.

(/usr/share/texmf-tetex/tex/context/base/supp-pdf.tex
(/usr/local/share/texmf/tex/latex/ppchtex/supp-mis.tex
loading : Context Support Macros / Missing
\protectiondepth=\count91
\scratchcounter=\count92
\scratchtoks=\toks15
\scratchdimen=\dimen105
\scratchskip=\skip43
\scratchmuskip=\muskip10
\scratchbox=\box27
\scratchread=\read2
\scratchwrite=\write4
\zeropoint=\dimen106
\minusone=\count93
\thousandpoint=\dimen107
\emptytoks=\toks16
\nextbox=\box28
\nextdepth=\dimen108
\everyline=\toks17
\!!counta=\count94
\!!countb=\count95
\recursecounter=\count96
)
loading : Context Support Macros / PDF (2004.03.26)
\nofMPsegments=\count97
\nofMParguments=\count98
\MPscratchCnt=\count99
\MPscratchDim=\dimen109
\MPnumerator=\count100
\everyMPtoPDFconversion=\toks18
)
LaTeX Font Info:    External font `cmex10' loaded for size
(Font)              <12> on input line 25.
LaTeX Font Info:    External font `cmex10' loaded for size
(Font)              <8> on input line 25.
LaTeX Font Info:    External font `cmex10' loaded for size
(Font)              <6> on input line 25.
LaTeX Font Info:    Try loading font information for T1+aett on input line 28.
 (/usr/share/texmf-tetex/tex/latex/ae/t1aett.fd
File: t1aett.fd 1997/11/16 Font definitions for T1/aett.
) [1

{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] (./snowfall.toc
LaTeX Font Info:    External font `cmex10' loaded for size
(Font)              <7> on input line 2.
LaTeX Font Info:    External font `cmex10' loaded for size
(Font)              <5> on input line 2.


LaTeX Font Warning: Font shape `T1/aett/bx/n' undefined
(Font)              using `T1/aett/m/n' instead on input line 17.

)
\tf@toc=\write5
\openout5 = `snowfall.toc'.

 [1] [2]
Overfull \hbox (9.75797pt too wide) in paragraph at lines 111--113
[]\T1/aer/m/n/10 Using two or more ma-chines for clus-ter cal-cu-la-tions, you 
need to setup a LAM/MPI
 []

[3] [4]
LaTeX Font Info:    Try loading font information for TS1+aett on input line 278
.
 (/usr/local/R/R-2.5.1/lib/R/share/texmf/ts1aett.fd
File: ts1aett.fd 
)
LaTeX Font Info:    Try loading font information for TS1+cmtt on input line 278
.

(/usr/share/texmf-tetex/tex/latex/base/ts1cmtt.fd
File: ts1cmtt.fd 1999/05/25 v2.5h Standard LaTeX font definitions
)
LaTeX Font Info:    Font shape `TS1/aett/m/n' in size <10> not available
(Font)              Font shape `TS1/cmtt/m/n' tried instead on input line 278.

Overfull \hbox (27.17896pt too wide) in paragraph at lines 278--278
[]  \T1/aett/m/n/10 cat( \TS1/cmtt/m/n/10 ''\T1/aett/m/n/10 Data: \TS1/cmtt/m/n
/10 ''\T1/aett/m/n/10 , datastep, \TS1/cmtt/m/n/10 ''\T1/aett/m/n/10 ADD1:\TS1/
cmtt/m/n/10 ''\T1/aett/m/n/10 , add1, \TS1/cmtt/m/n/10 ''\T1/aett/m/n/10 ADD2:\
TS1/cmtt/m/n/10 ''\T1/aett/m/n/10 , add2, \TS1/cmtt/m/n/10 ''\T1/aett/m/n/10 \n
\TS1/cmtt/m/n/10 '' \T1/aett/m/n/10 )[] 
 []

[5] [6]
Overfull \hbox (3.18701pt too wide) in paragraph at lines 327--327
[]\T1/aer/bx/n/10 Intermediate re-sult sav-ing and restor-ing us-ing \T1/aett/b
x/n/10 sfClusterApplySR 
 []


Overfull \hbox (53.23926pt too wide) in paragraph at lines 370--370
[]\T1/aett/bx/n/10 resultB <- sfClusterApplySR( someotherlist, someotherfunc, n
ame="CALC_TWO" )[] 
 []

[7]
Overfull \hbox (9.05685pt too wide) in paragraph at lines 402--411
[][] 
 []

[8]
LaTeX Font Info:    Try loading font information for TS1+aer on input line 429.

 (/usr/local/R/R-2.5.1/lib/R/share/texmf/ts1aer.fd
File: ts1aer.fd 
)
LaTeX Font Info:    Font shape `TS1/aer/m/n' in size <10> not available
(Font)              Font shape `TS1/cmr/m/n' tried instead on input line 429.

Overfull \hbox (0.14781pt too wide) in paragraph at lines 429--430
[]\T1/aett/bx/n/10 R --no-save --args --parallel --type=MPI --cpus=4 < program.
R \T1/aer/m/n/10 (start
 []


Overfull \hbox (72.9993pt too wide) in paragraph at lines 430--432
[]\T1/aett/bx/n/10 R --no-save --args --parallel --type=SOCK --hosts=localhost:
3,singlema,othmach:4
 []

[9]
Overfull \hbox (2.31973pt too wide) in paragraph at lines 461--464
\T1/aer/m/it/10 Clus-ter\T1/aer/m/n/10 , please visit $\T1/aett/bx/n/10 http : 
/ / www . imbi . uni-[]freiburg . de / XXX$ \T1/aer/m/n/10 or run \T1/aett/bx/n
/10 sfCluster
 []


Overfull \hbox (11.5581pt too wide) in paragraph at lines 473--476
[]\T1/aer/m/n/10 Detect free ressources in clus-ter uni-verse.[] Take ma-chines
 with free ressources
 []

[10]
Underfull \hbox (badness 10000) in paragraph at lines 492--492
[]\T1/aer/m/n/10 Batchmode (De-
 []


Underfull \hbox (badness 10000) in paragraph at lines 495--495
[]\T1/aer/m/n/10 Sequential ex-e-cu-
 []


Underfull \hbox (badness 10000) in paragraph at lines 495--495
\T1/aer/m/n/10 tion (no clus-ter
 []


Overfull \hbox (44.09299pt too wide) in paragraph at lines 491--497
[][] 
 []


Overfull \hbox (116.11914pt too wide) in paragraph at lines 517--517
[]  \T1/aett/bx/n/10 ## Run a given R program with 8 cpus and max. 500MB (0.5 g
igabytes) in monitoring mode[] 
 []


Overfull \hbox (89.91919pt too wide) in paragraph at lines 517--517
[]  \T1/aett/bx/n/10 ## Start R interactive shell with 4 cores. With 300MB memo
ry (MB is default unit)[] 
 []

[11] (./snowfall.bbl) [12] (./snowfall.aux)

LaTeX Font Warning: Some font shapes were not available, defaults substituted.

 ) 
Here is how much of TeX's memory you used:
 2263 strings out of 94500
 30107 string characters out of 1175771
 71814 words of memory out of 1000000
 5346 multiletter control sequences out of 10000+50000
 53500 words of font info for 102 fonts, out of 500000 for 2000
 580 hyphenation exceptions out of 8191
 35i,9n,21p,429b,284s stack positions out of 1500i,500n,5000p,200000b,5000s
PDF statistics:
 98 PDF objects out of 300000
 0 named destinations out of 131072
 1 words of extra memory for PDF output out of 65536
</usr/share/texmf-tetex/fonts/type1/bluesky/cm/cmtt12.pfb> </h/jo/.texmf-var/
fonts/pk/ljfour/jknappen/tc/tcrm1000.600pk></usr/share/texmf-tetex/fonts/type1/
bluesky/cm/cmmi10.pfb> </h/jo/.texmf-var/fonts/pk/ljfour/jknappen/tc/tctt1000.6
00pk></usr/share/texmf-tetex/fonts/type1/bluesky/cm/cmtt8.pfb></usr/share/texmf
-tetex/fonts/type1/bluesky/cm/cmr8.pfb></usr/share/texmf-tetex/fonts/type1/blue
sky/cm/cmr6.pfb></usr/share/texmf-tetex/fonts/type1/bluesky/cm/cmr7.pfb></usr/s
hare/texmf-tetex/fonts/type1/bluesky/cm/cmti10.pfb></usr/share/texmf-tetex/font
s/type1/bluesky/cm/cmbxti10.pfb></usr/share/texmf-tetex/fonts/type1/bluesky/cm/
cmtt10.pfb></usr/share/texmf-tetex/fonts/type1/bluesky/cm/cmbx10.pfb></usr/shar
e/texmf-tetex/fonts/type1/bluesky/cm/cmbx12.pfb></usr/share/texmf-tetex/fonts/t
ype1/bluesky/cm/cmr10.pfb></usr/share/texmf-tetex/fonts/type1/bluesky/cm/cmti9.
pfb></usr/share/texmf-tetex/fonts/type1/bluesky/cm/cmr9.pfb></usr/share/texmf-t
etex/fonts/type1/bluesky/cm/cmtt9.pfb></usr/share/texmf-tetex/fonts/type1/blues
ky/cm/cmbx9.pfb></usr/share/texmf-tetex/fonts/type1/bluesky/cm/cmr12.pfb></usr/
share/texmf-tetex/fonts/type1/bluesky/cm/cmr17.pfb>
Output written on snowfall.pdf (13 pages, 156614 bytes).
back to top