https://github.com/agartland/pwseqdist
Tip revision: d48d3bf4e6c79e5ba2417a1010f673179b27da68 authored by Andrew Gartland on 19 November 2020, 00:55:10 UTC
Fixed one unique seq for reexpand=False
Fixed one unique seq for reexpand=False
Tip revision: d48d3bf
setup.py
"""
This setup.py allows your python package to be installed.
Please completely update the parameters in the opts dictionary.
For more information, see https://stackoverflow.com/questions/1471994/what-is-setup-py
"""
from setuptools import setup, find_packages
PACKAGES = find_packages()
# read the contents of your README file
from os import path
this_directory = path.abspath(path.dirname(__file__))
with open(path.join(this_directory, 'README.md'), encoding='utf-8') as f:
long_description = f.read()
opts = dict(name='pwseqdist',
maintainer='Andrew Fiore-Gartland',
maintainer_email='agartlan@fredhutch.org',
description='Efficiently computes distances between protein sequences',
long_description=long_description,
long_description_content_type='text/markdown',
url='https://github.com/agartland/pwseqdist',
license='MIT',
author='Andrew Fiore-Gartland',
author_email='agartlan@fredhutch.org',
version='0.6',
packages=PACKAGES
)
install_reqs = [
'numpy>=1.16.4',
'pandas>=0.24.2',
'parasail>=1.1.17',
'parmap>=1.5.2',
'scipy>=1.2.1',
'numba']
if __name__ == "__main__":
setup(**opts, install_requires=install_reqs)