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  • createES.Rd
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To reference or cite the objects present in the Software Heritage archive, permalinks based on SoftWare Hash IDentifiers (SWHIDs) must be used.
Select below a type of object currently browsed in order to display its associated SWHID and permalink.

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swh:1:cnt:cf429d52256737303b5ebea2ce8e4973daad0891
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swh:1:dir:0a2fcedcd510b3c623e14d53a7b5adbb43931aa7

This interface enables to generate software citations, provided that the root directory of browsed objects contains a citation.cff or codemeta.json file.
Select below a type of object currently browsed in order to generate citations for them.

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(requires biblatex-software package)
Generating citation ...
(requires biblatex-software package)
Generating citation ...
createES.Rd
% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/createES.R
\name{createES}
\alias{createES}
\title{Create ExpressionSet.}
\usage{
createES(data, pData, varLabels, fData, fvarLabels, eData)
}
\arguments{
\item{data}{Gene expression matrix.}

\item{pData}{Matrix with phenotypical data.}

\item{varLabels}{Names of phenoData columns.}

\item{fData}{Matrix with feature data.}

\item{fvarLabels}{Names of featureData columns.}

\item{eData}{List with experimentData}
}
\value{
produced ExpressionSet object
}
\description{
\code{createES} function produces an ExpressionSet object from given data,
    and exports it to global scope.
}
\examples{
\dontrun{
data <- matrix(1:15, 5, 3)
pData <- c("A", "B", "C")
varLabels <- "cat"
fData <- c("p", "r", "s", "t", "u")
fvarLabels <- "id"
eData <- list(name="", lab="", contact="", title="", url="", other=list(), pubMedIds="")
createES(data, pData, varLabels, fData, fvarLabels, eData)
}

}

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