1
   2
   3
   4
   5
   6
   7
   8
   9
  10
  11
  12
  13
  14
  15
  16
  17
  18
  19
  20
  21
  22
  23
  24
  25
  26
  27
  28
  29
  30
  31
  32
  33
  34
  35
  36
  37
  38
  39
  40
  41
  42
  43
  44
  45
  46
  47
  48
  49
  50
  51
  52
  53
  54
  55
  56
  57
  58
  59
  60
  61
  62
  63
  64
  65
  66
  67
  68
  69
  70
  71
  72
  73
  74
  75
  76
  77
  78
  79
  80
  81
  82
  83
  84
  85
  86
  87
  88
  89
  90
  91
  92
  93
  94
  95
  96
  97
  98
  99
 100
 101
 102
 103
 104
 105
 106
 107
 108
 109
 110
 111
 112
 113
 114
 115
 116
 117
 118
 119
 120
 121
 122
 123
 124
 125
 126
 127
 128
 129
 130
 131
 132
 133
 134
 135
 136
 137
 138
 139
 140
 141
 142
 143
 144
 145
 146
 147
 148
 149
 150
 151
 152
 153
 154
 155
 156
 157
 158
 159
 160
 161
 162
 163
 164
 165
 166
 167
 168
 169
 170
 171
 172
 173
 174
 175
 176
 177
 178
 179
 180
 181
 182
 183
 184
 185
 186
 187
 188
 189
 190
 191
 192
 193
 194
 195
 196
 197
 198
 199
 200
 201
 202
 203
 204
 205
 206
 207
 208
 209
 210
 211
 212
 213
 214
 215
 216
 217
 218
 219
 220
 221
 222
 223
 224
 225
 226
 227
 228
 229
 230
 231
 232
 233
 234
 235
 236
 237
 238
 239
 240
 241
 242
 243
 244
 245
 246
 247
 248
 249
 250
 251
 252
 253
 254
 255
 256
 257
 258
 259
 260
 261
 262
 263
 264
 265
 266
 267
 268
 269
 270
 271
 272
 273
 274
 275
 276
 277
 278
 279
 280
 281
 282
 283
 284
 285
 286
 287
 288
 289
 290
 291
 292
 293
 294
 295
 296
 297
 298
 299
 300
 301
 302
 303
 304
 305
 306
 307
 308
 309
 310
 311
 312
 313
 314
 315
 316
 317
 318
 319
 320
 321
 322
 323
 324
 325
 326
 327
 328
 329
 330
 331
 332
 333
 334
 335
 336
 337
 338
 339
 340
 341
 342
 343
 344
 345
 346
 347
 348
 349
 350
 351
 352
 353
 354
 355
 356
 357
 358
 359
 360
 361
 362
 363
 364
 365
 366
 367
 368
 369
 370
 371
 372
 373
 374
 375
 376
 377
 378
 379
 380
 381
 382
 383
 384
 385
 386
 387
 388
 389
 390
 391
 392
 393
 394
 395
 396
 397
 398
 399
 400
 401
 402
 403
 404
 405
 406
 407
 408
 409
 410
 411
 412
 413
 414
 415
 416
 417
 418
 419
 420
 421
 422
 423
 424
 425
 426
 427
 428
 429
 430
 431
 432
 433
 434
 435
 436
 437
 438
 439
 440
 441
 442
 443
 444
 445
 446
 447
 448
 449
 450
 451
 452
 453
 454
 455
 456
 457
 458
 459
 460
 461
 462
 463
 464
 465
 466
 467
 468
 469
 470
 471
 472
 473
 474
 475
 476
 477
 478
 479
 480
 481
 482
 483
 484
 485
 486
 487
 488
 489
 490
 491
 492
 493
 494
 495
 496
 497
 498
 499
 500
 501
 502
 503
 504
 505
 506
 507
 508
 509
 510
 511
 512
 513
 514
 515
 516
 517
 518
 519
 520
 521
 522
 523
 524
 525
 526
 527
 528
 529
 530
 531
 532
 533
 534
 535
 536
 537
 538
 539
 540
 541
 542
 543
 544
 545
 546
 547
 548
 549
 550
 551
 552
 553
 554
 555
 556
 557
 558
 559
 560
 561
 562
 563
 564
 565
 566
 567
 568
 569
 570
 571
 572
 573
 574
 575
 576
 577
 578
 579
 580
 581
 582
 583
 584
 585
 586
 587
 588
 589
 590
 591
 592
 593
 594
 595
 596
 597
 598
 599
 600
 601
 602
 603
 604
 605
 606
 607
 608
 609
 610
 611
 612
 613
 614
 615
 616
 617
 618
 619
 620
 621
 622
 623
 624
 625
 626
 627
 628
 629
 630
 631
 632
 633
 634
 635
 636
 637
 638
 639
 640
 641
 642
 643
 644
 645
 646
 647
 648
 649
 650
 651
 652
 653
 654
 655
 656
 657
 658
 659
 660
 661
 662
 663
 664
 665
 666
 667
 668
 669
 670
 671
 672
 673
 674
 675
 676
 677
 678
 679
 680
 681
 682
 683
 684
 685
 686
 687
 688
 689
 690
 691
 692
 693
 694
 695
 696
 697
 698
 699
 700
 701
 702
 703
 704
 705
 706
 707
 708
 709
 710
 711
 712
 713
 714
 715
 716
 717
 718
 719
 720
 721
 722
 723
 724
 725
 726
 727
 728
 729
 730
 731
 732
 733
 734
 735
 736
 737
 738
 739
 740
 741
 742
 743
 744
 745
 746
 747
 748
 749
 750
 751
 752
 753
 754
 755
 756
 757
 758
 759
 760
 761
 762
 763
 764
 765
 766
 767
 768
 769
 770
 771
 772
 773
 774
 775
 776
 777
 778
 779
 780
 781
 782
 783
 784
 785
 786
 787
 788
 789
 790
 791
 792
 793
 794
 795
 796
 797
 798
 799
 800
 801
 802
 803
 804
 805
 806
 807
 808
 809
 810
 811
 812
 813
 814
 815
 816
 817
 818
 819
 820
 821
 822
 823
 824
 825
 826
 827
 828
 829
 830
 831
 832
 833
 834
 835
 836
 837
 838
 839
 840
 841
 842
 843
 844
 845
 846
 847
 848
 849
 850
 851
 852
 853
 854
 855
 856
 857
 858
 859
 860
 861
 862
 863
 864
 865
 866
 867
 868
 869
 870
 871
 872
 873
 874
 875
 876
 877
 878
 879
 880
 881
 882
 883
 884
 885
 886
 887
 888
 889
 890
 891
 892
 893
 894
 895
 896
 897
 898
 899
 900
 901
 902
 903
 904
 905
 906
 907
 908
 909
 910
 911
 912
 913
 914
 915
 916
 917
 918
 919
 920
 921
 922
 923
 924
 925
 926
 927
 928
 929
 930
 931
 932
 933
 934
 935
 936
 937
 938
 939
 940
 941
 942
 943
 944
 945
 946
 947
 948
 949
 950
 951
 952
 953
 954
 955
 956
 957
 958
 959
 960
 961
 962
 963
 964
 965
 966
 967
 968
 969
 970
 971
 972
 973
 974
 975
 976
 977
 978
 979
 980
 981
 982
 983
 984
 985
 986
 987
 988
 989
 990
 991
 992
 993
 994
 995
 996
 997
 998
 999
1000
1001
1002
1003
1004
1005
1006
1007
1008
1009
1010
1011
1012
1013
1014
1015
1016
1017
1018
1019
1020
1021
1022
1023
1024
1025
1026
1027
1028
1029
1030
1031
1032
1033
1034
1035
1036
1037
1038
1039
1040
1041
1042
1043
1044
1045
1046
1047
1048
1049
1050
1051
1052
1053
1054
1055
1056
1057
1058
1059
1060
1061
1062
1063
1064
1065
1066
1067
1068
1069
1070
1071
1072
1073
1074
1075
1076
1077
1078
1079
1080
1081
1082
1083
1084
1085
1086
1087
1088
1089
1090
1091
1092
1093
1094
1095
1096
1097
1098
1099
1100
1101
1102
1103
1104
#! /bin/sh
##
## Copyright (C) by Argonne National Laboratory
##     See COPYRIGHT in top-level directory
##

# Update all of the derived files
# For best performance, execute this in the top-level directory.
# There are some experimental features to allow it to be executed in
# subdirectories
#
# Eventually, we want to allow this script to be executed anywhere in the
# mpich tree.  This is not yet implemented.


warn() {
    echo "===> WARNING: $@"
}

error() {
    echo "===> ERROR:   $@"
}

echo_n() {
    # "echo -n" isn't portable, must portably implement with printf
    printf "%s" "$*"
}

########################################################################
## Checks to make sure we are running from the correct location
########################################################################

echo_n "Verifying the location of autogen.sh... "
if [ ! -d maint -o ! -s maint/version.m4 ] ; then
    echo "must execute at top level directory for now"
    exit 1
fi
# Set the SRCROOTDIR to be used later and avoid "cd ../../"-like usage.
SRCROOTDIR=$PWD
echo "done"

########################################################################
## Initialize variables to default values (possibly from the environment)
########################################################################

# Default choices
do_fortran=yes  # if no, skips patching libtool for Fortran
do_errmsgs=yes
do_getcvars=yes
do_f77=yes
do_f90=no  # we generate f90 binding in configure
do_f08=yes
do_cxx=yes
do_build_configure=yes
do_atdir_check=no
do_atver_check=yes
do_subcfg_m4=yes
do_hwloc=yes
do_ofi=yes
do_ucx=yes
do_json=yes
do_yaksa=yes
do_test=yes
do_hydra=yes
do_romio=yes
do_pmi=yes
do_doc=no

yaksa_depth=2

do_quick=no
# Check -quick option. When enabled, skip as much as we can.
for arg in "$@" ; do
    if test $arg = "-quick"; then
        do_quick=yes
        do_hwloc=no
        do_json=no
        do_ofi=no
        do_ucx=no
        do_yaksa=no
        do_test=yes
        do_hydra=yes
        do_romio=no

        if test -e 'modules.tar.gz' -a ! -e 'modules/PREBUILT' ; then
            echo_n "Untaring modules.tar.gz... "
            tar xf modules.tar.gz
            echo "done"
        fi
    fi
done

# Allow MAKE to be set from the environment
MAKE=${MAKE-make}

# amdirs are the directories that make use of autoreconf
amdirs=". src/mpl src/pmi"

autoreconf_args="-if"
export autoreconf_args

########################################################################
## Utility functions
########################################################################

recreate_tmp() {
    rm -rf .tmp
    mkdir .tmp 2>&1 >/dev/null
}

# Assume Program's install-dir is <install-dir>/bin/<prog>.
# Given program name as the 1st argument,
# the install-dir is returned is returned in 2nd argument.
# e.g., ProgHomeDir libtoolize libtooldir.
ProgHomeDir() {
    prog=$1
    progpath="`which $prog`"
    progbindir="`dirname $progpath`"
    proghome=`(cd $progbindir/.. && pwd)`
    eval $2=$proghome
}

# checking and patching submodules
check_submodule_presence() {
    if test ! -f "$SRCROOTDIR/$1/configure.ac"; then
        error "Submodule $1 is not checked out."
        error "if you just git cloned this repository, run"
        error "    git submodule update --init"
        error "to checkout the submodules."
        exit 1
    fi
}

########################################################################
## prerequisite functions
########################################################################

autoconf=
set_autotools() {
    if test -z "$autoconf" ; then
        if [ -n "$autotoolsdir" ] ; then
            if [ -x $autotoolsdir/autoconf -a -x $autotoolsdir/autoheader ] ; then
                autoconf=$autotoolsdir/autoconf
                autoheader=$autotoolsdir/autoheader
                autoreconf=$autotoolsdir/autoreconf
                automake=$autotoolsdir/automake
                autom4te=$autotoolsdir/autom4te
                aclocal=$autotoolsdir/aclocal
                if [ -x "$autotoolsdir/glibtoolize" ] ; then
                    libtoolize=$autotoolsdir/glibtoolize
                else
                    libtoolize=$autotoolsdir/libtoolize
                fi

                AUTOCONF=$autoconf
                AUTOHEADER=$autoheader
                AUTORECONF=$autoreconf
                AUTOMAKE=$automake
                AUTOM4TE=$autom4te
                ACLOCAL=$aclocal
                LIBTOOLIZE=$libtoolize

                export AUTOCONF
                export AUTOHEADER
                export AUTORECONF
                export AUTOM4TE
                export AUTOMAKE
                export ACLOCAL
                export LIBTOOLIZE
            else
                echo "could not find executable autoconf and autoheader in $autotoolsdir"
                exit 1
            fi
        else
            autoconf=${AUTOCONF:-autoconf}
            autoheader=${AUTOHEADER:-autoheader}
            autoreconf=${AUTORECONF:-autoreconf}
            autom4te=${AUTOM4TE:-autom4te}
            automake=${AUTOMAKE:-automake}
            aclocal=${ACLOCAL:-aclocal}
            if test -z "${LIBTOOLIZE+set}" && ( glibtoolize --version ) >/dev/null 2>&1 ; then
                libtoolize=glibtoolize
            else
                libtoolize=${LIBTOOLIZE:-libtoolize}
            fi
        fi
    fi
}

externals=
set_externals() {
    if test -z "$externals" ; then
        #TODO: if necessary, run: git submodule update --init

        # external packages that require autogen.sh to be run for each of them
        externals="test/mpi"

        if [ "yes" = "$do_hydra" ] ; then
            externals="${externals} src/pm/hydra"
        fi

        if [ "yes" = "$do_romio" ] ; then
            externals="${externals} src/mpi/romio"
        fi

        if [ "yes" = "$do_pmi" ] ; then
            externals="${externals} src/pmi"
        fi

        if [ "yes" = "$do_hwloc" ] ; then
            check_submodule_presence modules/hwloc
            externals="${externals} modules/hwloc"
        fi

        if [ "yes" = "$do_ucx" ] ; then
            check_submodule_presence modules/ucx
            externals="${externals} modules/ucx"
        fi

        if [ "yes" = "$do_ofi" ] ; then
            check_submodule_presence modules/libfabric
            externals="${externals} modules/libfabric"
        fi

        if [ "yes" = "$do_json" ] ; then
            check_submodule_presence "modules/json-c"
            externals="${externals} modules/json-c"
        fi

        if [ "yes" = "$do_yaksa" ] ; then
            check_submodule_presence "modules/yaksa"
            externals="${externals} modules/yaksa"
        fi
    fi
}

check_python3() {
    echo_n "Checking for Python 3... "
    PYTHON=

    python_one_liner="import sys; print(sys.version_info[0])"
    PYTHON_PATH=`command -v python`
    if test "x$PYTHON_PATH" != x ; then
        version=`$PYTHON_PATH -c "$python_one_liner"`
        if test "$version" = 3 ; then
            PYTHON=$PYTHON_PATH
        fi
    fi
    if test "x$PYTHON" = x ; then
        PYTHON_PATH=`command -v python3`
        if test "x$PYTHON_PATH" != x ; then
            version=`$PYTHON_PATH -c "$python_one_liner"`
            if test "$version" = 3 ; then
                PYTHON=$PYTHON_PATH
            fi
        fi
    fi

    if test -z "$PYTHON" ; then
        echo "not found"
        exit 1
    else
        echo "$PYTHON"
    fi
}

set_PYTHON() {
    if test -z "$PYTHON" ; then
        check_python3
    fi
}

########################################################################
## Step functions
########################################################################

sync_external () {
    srcdir=$1
    destdir=$2

    echo "syncing '$srcdir' --> '$destdir'"

    # deletion prevents creating 'confdb/confdb' situation, also cleans
    # stray files that may have crept in somehow
    rm -rf "$destdir"
    cp -pPR "$srcdir" "$destdir"
}

fn_copy_confdb_etc() {
    # This used to be an optionally installed hook to help with git-svn
    # versions of the old SVN repo.  Now that we are using git, this is our
    # mechanism that replaces relative svn:externals paths, such as for
    # "confdb" and "mpl". The basic plan is to delete the destdir and then
    # copy all of the files, warts and all, from the source directory to the
    # destination directory.
    echo
    echo "####################################"
    echo "## Replicating confdb (and similar)"
    echo "####################################"
    echo

    confdb_dirs=
    confdb_dirs="${confdb_dirs} src/mpl/confdb"
    if test "$do_pmi" = "yes" ; then
        confdb_dirs="${confdb_dirs} src/pmi/confdb"
        if test "$do_quick" = "no" ; then
            sync_external src/mpl src/pmi/mpl
            confdb_dirs="${confdb_dirs} src/pmi/mpl/confdb"
        fi
    fi
    if test "$do_romio" = "yes" ; then
        confdb_dirs="${confdb_dirs} src/mpi/romio/confdb"
        if test "$do_quick" = "no" ; then
            sync_external src/mpl src/mpi/romio/mpl
            confdb_dirs="${confdb_dirs} src/mpi/romio/mpl/confdb"
        fi
    fi
    if test "$do_hydra" = "yes" ; then
        confdb_dirs="${confdb_dirs} src/pm/hydra/confdb"
        if test "$do_quick" = "no" ; then
            mkdir -p src/pm/hydra/modules
            sync_external src/mpl src/pm/hydra/modules/mpl
            sync_external src/pmi src/pm/hydra/modules/pmi
            sync_external modules/hwloc src/pm/hydra/modules/hwloc
            # remove .git directories to avoid confusing git clean
            rm -rf src/pm/hydra/modules/hwloc/.git
            confdb_dirs="${confdb_dirs} src/pm/hydra/modules/mpl/confdb"
            confdb_dirs="${confdb_dirs} src/pm/hydra/modules/pmi/confdb"
            confdb_dirs="${confdb_dirs} src/pm/hydra/modules/pmi/mpl/confdb"
        fi
    fi
    if test "$do_test" = "yes" ; then
        confdb_dirs="${confdb_dirs} test/mpi/confdb"
        confdb_dirs="${confdb_dirs} test/mpi/dtpools/confdb"
    fi

    # all the confdb directories, by various names
    for destdir in $confdb_dirs ; do
        sync_external confdb "$destdir"
    done

    # a couple of other random files
    if [ -f maint/version.m4 ] ; then
        cp -pPR maint/version.m4 src/pm/hydra/version.m4
        cp -pPR maint/version.m4 src/mpi/romio/version.m4
        cp -pPR maint/version.m4 src/pmi/version.m4
        cp -pPR maint/version.m4 test/mpi/version.m4
    fi

    # Now sanity check that some of the above sync was successful
    f="aclocal_cc.m4"
    for d in $confdb_dirs ; do
        if [ -f "$d/$f" ] ; then :
        else
            error "expected to find '$f' in '$d'"
            exit 1
        fi
    done
}

fn_maint_configure() {
    set_autotools
    echo
    echo "------------------------------------"
    echo "Initiating building required scripts"
    (cd maint && $autoconf && rm -rf autom4te*.cache && ./configure)
    echo "Done building required scripts"
    echo "------------------------------------"
    echo
}

fn_errmsgs() {
    if test ! -x maint/extracterrmsgs ; then
        fn_maint_configure
    fi

    echo_n "Extracting error messages... "
    rm -rf .tmp
    rm -f .err
    rm -f unusederr.txt
    maint/extracterrmsgs -careful=unusederr.txt \
        -skip=src/util/multichannel/mpi.c `cat maint/errmsgdirs` > \
        .tmp 2>.err
    # (error here is ok)
    echo "done"

    update_errdefs=yes
    if [ -s .err ] ; then
        cat .err
        rm -f .err2
        grep -v "Warning:" .err > .err2
        if [ -s .err2 ] ; then
            warn "Because of errors in extracting error messages, the file"
            warn "src/mpi/errhan/defmsg.h was not updated."
            error "Error message files in src/mpi/errhan were not updated."
            rm -f .tmp .err .err2
            exit 1
        fi
        rm -f .err .err2
    else
        # In case it exists but has zero size
        rm -f .err
    fi
    if [ -s unusederr.txt ] ; then
        warn "There are unused error message texts in src/mpi/errhan/errnames.txt"
        warn "See the file unusederr.txt for the complete list"
    fi
    if [ -s .tmp -a "$update_errdefs" = "yes" ] ; then
        mv .tmp src/mpi/errhan/defmsg.h
    fi
    if [ ! -s src/mpi/errhan/defmsg.h ] ; then
        error "Unable to extract error messages"
        exit 1
    fi
}

fn_getcvars() {
    echo_n "Extracting control variables (cvar) ... "
    if test ! -x maint/extractcvars ; then
        fn_maint_configure
    fi

    if ./maint/extractcvars ; then
        echo "done"
    else
        echo "failed"
        error "unable to extract control variables"
        exit 1
    fi
}

fn_maint_version() {
    set_autotools
    # build a substitute maint/Version script now that we store the single copy of
    # this information in an m4 file for autoconf's benefit
    echo_n "Generating a helper maint/Version... "
    if $autom4te -l M4sugar maint/Version.base.m4 > maint/Version ; then
        echo "done"
    else
        echo "error"
        error "unable to correctly generate maint/Version shell helper"
    fi
}

fn_update_README() {
    if test ! -f ./maint/Version ; then
        fn_maint_version
    fi

    echo_n "Updating the README... "

    # import MPICH_VERSION and LIBFABRIC_VERSION
    . ./maint/Version

    if [ -f README.vin ] ; then
        sed -e "s/%VERSION%/${MPICH_VERSION}/g" -e "s/%LIBFABRIC_VERSION%/${LIBFABRIC_VERSION}/g" README.vin > README
        echo "done"
    else
        echo "error"
        error "README.vin file not present, unable to update README version number (perhaps we are running in a release tarball source tree?)"
    fi
}

fn_gen_subcfg_m4() {
    echo_n "Creating subsys_include.m4... "
    ./maint/gen_subcfg_m4
    echo "done"
}

fn_romio_glue() {
    echo_n "Building ROMIO glue code... "
    ( cd src/glue/romio && chmod a+x ./all_romio_symbols && ./all_romio_symbols ../../mpi/romio/include/mpio.h.in )
    echo "done"
}

fn_abi() {
    ($PYTHON maint/gen_abi.py)
}

fn_f77() {
    set_PYTHON
    echo_n "Building Fortran 77 interface... "
    $PYTHON maint/gen_binding_f77.py
    echo "done"
}

fn_f90() {
    echo_n "Building Fortran 90 interface... "
    $PYTHON maint/gen_binding_f90.py
    echo "done"
}

fn_f08() {
    echo_n "Building Fortran 08 interface... "
    $PYTHON maint/gen_binding_f08.py
    echo "done"
}

fn_cxx() {
    echo_n "Building C++ interface... "
    ( cd src/binding/cxx && chmod a+x ./buildiface &&
        ./buildiface -nosep -initfile=./cxx.vlist )
    echo "done"
}

fn_ch4_api() {
    set_PYTHON
    echo_n "generating ch4 API boilerplates... "
    $PYTHON ./maint/gen_ch4_api.py
}

fn_gen_coll() {
    set_PYTHON
    echo_n "generating Collective functions..."
    $PYTHON maint/gen_coll.py
    echo "done"
}

fn_gen_binding_c() {
    set_PYTHON
    echo_n "generating MPI C functions..."
    _opt=
    if test "$do_quick" = "yes"; then
        _opt="$_opt -single-source"
    fi
    if test "$do_doc" = "yes"; then
        _opt="$_opt -output-mansrc"
    fi
    $PYTHON maint/gen_binding_c.py $_opt
    echo "done"
}

fn_json_gen() {
    echo_n "generating json char arrays... "
    ./maint/tuning/coll/json_gen.sh
    echo "done"
}

# internal
_patch_libtool() {
    _file=$1
    _patch=$2
    if test -f "$_file" ; then
        echo_n "Patching $_file with $_patch..."
        patch -N -s -l $_file maint/patches/optional/confdb/$_patch && :
        if [ $? -eq 0 ] ; then
            # Remove possible leftovers, which don't imply a failure
            rm -f $_file.orig
            # updates _patch_successful for return
            _patch_successful=yes
            echo "done"
        else
            echo "failed"
        fi
    fi
}

autoreconf_amdir() {
    _dir=$1
    if [ -d "$_dir" -o -L "$_dir" ] ; then
        echo "------------------------------------------------------------------------"
        echo "running $autoreconf in $_dir"
        (cd $_dir && $autoreconf $autoreconf_args) || exit 1

        # Patching ltmain.sh and libtool.m4
        # This works with libtool versions 2.4 - 2.4.2.
        # Older versions are not supported to build mpich.
        # Newer versions should have this patch already included.

        _patch_successful=no

        _patch_libtool $_dir/confdb/ltmain.sh  intel-compiler.patch
        _patch_libtool $_dir/confdb/libtool.m4 sys_lib_dlsearch_path_spec.patch
        _patch_libtool $_dir/confdb/libtool.m4 big-sur.patch
        _patch_libtool $_dir/confdb/libtool.m4 hpc-sdk.patch
        if test "$do_fortran" = "yes" ; then
            _patch_libtool $_dir/confdb/libtool.m4 darwin-ifort.patch
            _patch_libtool $_dir/confdb/libtool.m4 oracle-fort.patch
            _patch_libtool $_dir/confdb/libtool.m4 flang.patch
            _patch_libtool $_dir/confdb/libtool.m4 arm-compiler.patch
            _patch_libtool $_dir/confdb/libtool.m4 ibm-xlf.patch
        fi

        if test "$_patch_successful" = "yes" ; then
            (cd $_dir && $autoconf -f) || exit 1
            # Reset timestamps to avoid confusing make
            touch -r $_dir/confdb/ltversion.m4 $_dir/confdb/ltmain.sh $_dir/confdb/libtool.m4
        fi
    fi
}

autogen_external() {
    _dir=$1
    if [ -d "$_dir" -o -L "$_dir" ] ; then
        echo "------------------------------------------------------------------------"
        echo "running third-party initialization in $_dir"
        if test "$_dir" = "modules/yaksa" -a -n "$yaksa_depth" ; then
            (cd $_dir && ./autogen.sh --pup-max-nesting=$yaksa_depth) || exit 1
        else
            (cd $_dir && ./autogen.sh) || exit 1
        fi
    else
        error "external directory $_dir missing"
        exit 1
    fi
}

fn_build_configure() {
    set_autotools
    if [ "$do_build_configure" = "yes" ] ; then
        set_externals
        for external in $externals ; do
            autogen_external $external
        done

        for amdir in $amdirs ; do
            autoreconf_amdir $amdir
        done
    fi
}

########################################################################
## functions for checking prerequisites
########################################################################

fn_check_autotools() {
    set_autotools
    ProgHomeDir $autoconf   autoconfdir
    ProgHomeDir $automake   automakedir
    ProgHomeDir $libtoolize libtooldir

    echo_n "Checking if autotools are in the same location... "
    if [ "$autoconfdir" = "$automakedir" -a "$autoconfdir" = "$libtooldir" ] ; then
        same_atdir=yes
        echo "yes, all in $autoconfdir"
    else
        same_atdir=no
        echo "no"
        echo "	autoconf is in $autoconfdir"
        echo "	automake is in $automakedir"
        echo "	libtool  is in $libtooldir"
        # Emit a big warning message if $same_atdir = no.
        warn "Autotools are in different locations. In rare occasion,"
        warn "resulting configure or makefile may fail in some unexpected ways."
    fi

    ########################################################################
    ## Check if autoreconf can be patched to work
    ## when autotools are not in the same location.
    ## This test needs to be done before individual tests of autotools
    ########################################################################

    # If autotools are not in the same location, override autoreconf appropriately.
    if [ "$same_atdir" != "yes" ] ; then
        if [ -z "$libtooldir" ] ; then
            ProgHomeDir $libtoolize libtooldir
        fi
        libtoolm4dir="$libtooldir/share/aclocal"
        echo_n "Checking if $autoreconf accepts -I $libtoolm4dir... "
        new_autoreconf_works=no
        if [ -d "$libtoolm4dir" -a -f "$libtoolm4dir/libtool.m4" ] ; then
            recreate_tmp
            cat >.tmp/configure.ac <<_EOF
AC_INIT(foo,1.0)
AC_PROG_LIBTOOL
AC_OUTPUT
_EOF
            AUTORECONF="$autoreconf -I $libtoolm4dir"
            if (cd .tmp && $AUTORECONF -ivf >/dev/null 2>&1) ; then
                new_autoreconf_works=yes
            fi
            rm -rf .tmp
        fi
        echo "$new_autoreconf_works"
        # If autoreconf accepts -I <libtool's m4 dir> correctly, use -I.
        # If not, run libtoolize before autoreconf (i.e. for autoconf <= 2.63)
        # This test is more general than checking the autoconf version.
        if [ "$new_autoreconf_works" != "yes" ] ; then
            echo_n "Checking if $autoreconf works after an additional $libtoolize step... "
            new_autoreconf_works=no
            recreate_tmp
            # Need AC_CONFIG_
            cat >.tmp/configure.ac <<_EOF
AC_INIT(foo,1.0)
AC_CONFIG_AUX_DIR([m4])
AC_CONFIG_MACRO_DIR([m4])
AC_PROG_LIBTOOL
AC_OUTPUT
_EOF
            cat >.tmp/Makefile.am <<_EOF
ACLOCAL_AMFLAGS = -I m4
_EOF
            AUTORECONF="eval $libtoolize && $autoreconf"
            if (cd .tmp && $AUTORECONF -ivf >u.txt 2>&1) ; then
                new_autoreconf_works=yes
            fi
            rm -rf .tmp
            echo "$new_autoreconf_works"
        fi
        if [ "$new_autoreconf_works" = "yes" ] ; then
            export AUTORECONF
            autoreconf="$AUTORECONF"
        else
            # Since all autoreconf workarounds do not work, we need
            # to require all autotools to be in the same directory.
            do_atdir_check=yes
            error "Since none of the autoreconf workaround works"
            error "and autotools are not in the same directory, aborting..."
            error "Updating autotools or putting all autotools in the same location"
            error "may resolve the issue."
            exit 1
        fi
    fi

    if test $do_quick = "yes" ; then
        : # skip autotool versions check in quick mode (since it is too slow)
    else
        ########################################################################
        ## Verify autoconf version
        ########################################################################

        echo_n "Checking for autoconf version... "
        recreate_tmp
        ver=2.69
        cat > .tmp/configure.ac<<EOF
AC_INIT
AC_PREREQ($ver)
AC_OUTPUT
EOF
        if (cd .tmp && $autoreconf $autoreconf_args >autoreconf.out 2>autoreconf.err) ; then
            echo ">= $ver"
        else
            echo "bad autoconf installation"
            echo "--- autoreconf diagnostics ---"
            $(cat autoreconf.err)
            echo "--- autoreconf diagnostics ---"
            cat <<EOF
You either do not have autoconf in your path or it is too old (version
$ver or higher required). You may be able to use

    autoconf --version

Unfortunately, there is no standard format for the version output and
it changes between autotools versions.  In addition, some versions of
autoconf choose among many versions and provide incorrect output).
EOF
            exit 1
        fi


        ########################################################################
        ## Verify automake version
        ########################################################################

        echo_n "Checking for automake version... "
        recreate_tmp
        ver=1.15
        cat > .tmp/configure.ac<<EOF
AC_INIT(testver,1.0)
AC_CONFIG_AUX_DIR([m4])
AC_CONFIG_MACRO_DIR([m4])
m4_ifdef([AM_INIT_AUTOMAKE],,[m4_fatal([AM_INIT_AUTOMAKE not defined])])
AM_INIT_AUTOMAKE([$ver foreign])
AC_MSG_RESULT([A message])
AC_OUTPUT([Makefile])
EOF
    cat <<EOF >.tmp/Makefile.am
ACLOCAL_AMFLAGS = -I m4
EOF
        if [ ! -d .tmp/m4 ] ; then mkdir .tmp/m4 >/dev/null 2>&1 ; fi
        if (cd .tmp && $autoreconf $autoreconf_args >/dev/null 2>&1 ) ; then
            echo ">= $ver"
        else
            echo "bad automake installation"
            cat <<EOF
You either do not have automake in your path or it is too old (version
$ver or higher required). You may be able to use

    automake --version

Unfortunately, there is no standard format for the version output and
it changes between autotools versions.  In addition, some versions of
autoconf choose among many versions and provide incorrect output).
EOF
            exit 1
        fi


        ########################################################################
        ## Verify libtool version
        ########################################################################

        echo_n "Checking for libtool version... "
        recreate_tmp
        ver=2.4.4
        cat <<EOF >.tmp/configure.ac
AC_INIT(testver,1.0)
AC_CONFIG_AUX_DIR([m4])
AC_CONFIG_MACRO_DIR([m4])
m4_ifdef([LT_PREREQ],,[m4_fatal([LT_PREREQ not defined])])
LT_PREREQ($ver)
LT_INIT()
AC_MSG_RESULT([A message])
EOF
        cat <<EOF >.tmp/Makefile.am
ACLOCAL_AMFLAGS = -I m4
EOF
        if [ ! -d .tmp/m4 ] ; then mkdir .tmp/m4 >/dev/null 2>&1 ; fi
        if (cd .tmp && $autoreconf $autoreconf_args >/dev/null 2>&1 ) ; then
            echo ">= $ver"
        else
            echo "bad libtool installation"
            cat <<EOF
You either do not have libtool in your path or it is too old
(version $ver or higher required). You may be able to use

    libtool --version

Unfortunately, there is no standard format for the version output and
it changes between autotools versions.  In addition, some versions of
autoconf choose among many versions and provide incorrect output).
EOF
            exit 1
        fi
    fi
}

fn_check_bash_find_patch_xargs() {
    echo_n "Checking for bash... "
    if test "`which bash 2>&1 > /dev/null ; echo $?`" = "0" ;then
        echo "done"
    else
        echo "bash not found" ;
        exit 1;
    fi

    echo_n "Checking for UNIX find... "
    find ./maint -name 'configure.ac' > /dev/null 2>&1
    if [ $? = 0 ] ; then
        echo "done"
    else
        echo "not found (error)"
        exit 1
    fi

    echo_n "Checking for UNIX patch... "
    patch -v > /dev/null 2>&1
    if [ $? = 0 ] ; then
        echo "done"
    else
        echo "not found (error)"
        exit 1
    fi

    echo_n "Checking if xargs rm -rf works... "
    if [ -d "`find ./maint -name __random_dir__`" ] ; then
        error "found a directory named __random_dir__"
        exit 1
    else
        mkdir ./maint/__random_dir__
        find ./maint -name __random_dir__ | xargs rm -rf > /dev/null 2>&1
        if [ $? = 0 ] ; then
            echo "yes"
        else
            echo "no (error)"
            rm -rf ./maint/__random_dir__
            exit 1
        fi
    fi
}

# end of utility functions
#-----------------------------------------------------------------------

########################################################################
## Read the command-line arguments
########################################################################

for arg in "$@" ; do
    case $arg in 
        -quick)
            ;;
	-echo)
	    set -x
	    ;;
	
	-atdircheck=*)
	    val=`echo X$arg | sed -e 's/^X-atdircheck=//'`
            case $val in
		yes|YES|true|TRUE|1) do_atdir_check=yes ;;
		no|NO|false|FALSE|0) do_atdir_check=no ;;
		*) warn "unknown option: $arg."
            esac
            ;;

	-atvercheck=*)
            val=`echo X$arg | sed -e 's/^X-atvercheck=//'`
            case $val in
		yes|YES|true|TRUE|1) do_atver_check=yes ;;
		no|NO|false|FALSE|0) do_atver_check=no ;;
		*) warn "unknown option: $arg."
            esac
            ;;

	-yaksa-depth=*)
            val=`echo X$arg | sed -e 's/^X-yaksa-depth=//'`
            yaksa_depth=$val
            ;;

	-do=*|--do=*)
	    opt=`echo A$arg | sed -e 's/^A--*do=//'`
            if type fn_$opt | grep -q 'function' ; then
                echo Running step $opt...
                fn_$opt
                exit 0
            else
		echo "-do=$opt is unrecognized"
		exit 1
            fi
	    ;;

        -verbose-autoreconf|--verbose-autoreconf)
            autoreconf_args="-vif"
            export autoreconf_args
            ;;

	-with-autotools=*|--with-autotools=*)
	    autotoolsdir=`echo "A$arg" | sed -e 's/.*=//'`
	    ;;

        -without-*|--without-*)
            opt=`echo A$arg | sed -e 's/^A--*without-//'`
            var=do_$opt
            eval $var=no
            case "$opt" in
                fortran)
                    do_f77=no
                    do_f90=no
                    do_f08=no
                    ;;
            esac
            ;;

        -with-*|--with-*)
            opt=`echo A$arg | sed -e 's/^A--*with-//'`
            var=do_$opt
            eval $var=yes
            case "$opt" in
                f77 | f90 | f08)
                    do_fortran=yes
                    ;;
            esac
            ;;

	-help|--help|-usage|--usage)
	    cat <<EOF
   ./autogen.sh [ --with-autotools=dir ] \\
                [ -atdircheck=[yes|no] ] \\
                [ -atvercheck=[yes|no] ] \\
                [ --verbose-autoreconf ] \\
                [ --do=stepname ] [ -distrib ]
    Update the files in the MPICH build tree.  This file builds the 
    configure files, creates the Makefile.in files, extracts the error
    messages.

    You can use --with-autotools=dir to specify a directory that
    contains alternate autotools.

    -atdircheck=[yes|no] specifies the enforcement of all autotools
    should be installed in the same directory.

    -atvercheck=[yes|no] specifies if the check for the version of 
    autotools should be carried out.

    -distrib creates a distribution version of the Makefile.in files (no
    targets for updating the Makefile.in from Makefile.sm or rebuilding the
    autotools targets).  This does not create the configure files because
    some of those depend on rules in the Makefile.in in that directory.  
    Thus, to build all of the files for a distribution, run autogen.sh
    twice, as in 
         autogen.sh && autogen.sh -distrib

    -quick skips most of the modules autoconf. This is used when modules
    are prebuilt and used specifically in CI testing to accelerate the build.
EOF
	    exit 1
	    ;;

	*)
	    echo "unknown argument $arg"
	    exit 1
	    ;;

    esac
done

########################################################################
## Check for the location of autotools
########################################################################

if test "$do_quick" = "no" ; then
    fn_check_autotools
else
    set_autotools
fi
fn_check_bash_find_patch_xargs
check_python3

########################################################################
## Setup external packages
########################################################################
set_externals

########################################################################
## duplicating confdb, mpl, version.m4 etc.
########################################################################
fn_copy_confdb_etc

########################################################################
## Building maint/Version
########################################################################
fn_maint_version

########################################################################
## Building the README
########################################################################
fn_update_README

set -e

########################################################################
## Building subsys_include.m4
########################################################################
if [ "X$do_subcfg_m4" = Xyes ] ; then
    fn_gen_subcfg_m4
fi


########################################################################
## Building ROMIO glue code
########################################################################
fn_romio_glue

########################################################################
## Building Collective top-level code
########################################################################
fn_gen_coll

########################################################################
## Building C interfaces
########################################################################
fn_gen_binding_c

########################################################################
## Building non-C interfaces
########################################################################

# Create the bindings if necessary 
fn_abi

if [ $do_f77 = "yes" ] ; then
    fn_f77
else
    touch src/binding/fortran/mpif_h/mpif.h.in
fi
if [ $do_f90 = "yes" ] ; then
    fn_f90
fi
if [ $do_f08 = "yes" ] ; then
    fn_f08
else
    touch src/binding/fortran/use_mpi_f08/mpi_f08_compile_constants.f90.in
fi

if [ $do_cxx = "yes" ] ; then
    fn_cxx
fi

########################################################################
## Extract error messages
########################################################################
if [ $do_errmsgs = "yes" ] ; then
    fn_errmsgs
fi


########################################################################
## Build required scripts
########################################################################
fn_maint_configure

# new parameter code
if test "$do_getcvars" = "yes" ; then
    fn_getcvars
fi

########################################################################
## Running autotools on non-simplemake directories
########################################################################
fn_build_configure

fn_ch4_api

fn_json_gen