wormbase.xml
<?xml version="1.0"?>
<tool name="WormBase" id="wormbase" tool_type="data_source" version="1.0.1">
<description>server</description>
<edam_operations>
<edam_operation>operation_0224</edam_operation>
</edam_operations>
<command><![CDATA[
python '$__tool_directory__/data_source.py' '$output' $__app__.config.output_size_limit
]]></command>
<inputs action="http://www.wormbase.org/tools/genome/gbrowse/c_elegans/" check_values="false" target="_top">
<display>go to Wormbase server $GALAXY_URL</display>
<param name="GALAXY_URL" type="baseurl" value="/tool_runner?tool_id=wormbase" />
</inputs>
<request_param_translation>
<request_param galaxy_name="URL" remote_name="URL" missing="">
<append_param separator="&" first_separator="?" join="=">
<value name="d" missing="" />
<value name="dbkey" missing="" />
<value name="q" missing="" />
<value name="s" missing="" />
<value name="t" missing="" />
</append_param>
</request_param>
<request_param galaxy_name="URL_method" remote_name="URL_method" missing="post" />
<request_param galaxy_name="data_type" remote_name="data_type" missing="auto" />
</request_param_translation>
<uihints minwidth="800"/>
<outputs>
<data name="output" format="txt" label="${tool.name} on $getVar( 'q', 'unknown position' )"/>
</outputs>
<options sanitize="False" refresh="True"/>
</tool>