parm 7f1q_renum.pdb
parm average.pdb 
trajin 7f1q_renum.pdb parmindex 0
reference average.pdb [ref] parmindex 1 
readdata evecs.dat name myEvecs
strip !:14-38,49-70,80-110,125-147,170-202,216-239,252-291@CA
rms reference ref 
projection modes myEvecs out project_7fq1.dat beg 1 end 3 @CA
run