repeats_to_hgr_conversion_test.cc
/*******************************************************************************
* This file is part of KaHyPar.
*
* Copyright (C) 2014 Sebastian Schlag <sebastian.schlag@kit.edu>
*
* KaHyPar is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* KaHyPar is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with KaHyPar. If not, see <http://www.gnu.org/licenses/>.
*
******************************************************************************/
#include "gtest/gtest.h"
#include "kahypar/definitions.h"
#include "kahypar/io/hypergraph_io.h"
#include "tools/repeats_to_hgr_conversion.h"
using ::testing::Test;
namespace kahypar {
namespace phylo {
TEST(Phylo, Works) {
std::ifstream file("test_instances/repeats.txt");
const std::string hgr_filename("test_instances/repeats.phylo.hgr");
convertToHypergraph(file, hgr_filename);
Hypergraph hypergraph = io::createHypergraphFromFile(hgr_filename, 2);
hypergraph.printGraphState();
ASSERT_EQ(hypergraph.initialNumNodes(), 5);
ASSERT_EQ(hypergraph.initialNumPins(), 27);
ASSERT_EQ(hypergraph.initialNumEdges(), 12);
std::vector<HypernodeID> pins({ 1, 4 });
size_t i = 0;
for (const HypernodeID& pin : hypergraph.pins(0)) {
ASSERT_EQ(pin, pins[i++]);
}
pins = { 1, 4 };
i = 0;
for (const HypernodeID& pin : hypergraph.pins(1)) {
ASSERT_EQ(pin, pins[i++]);
}
pins = { 0, 1, 4 };
i = 0;
for (const HypernodeID& pin : hypergraph.pins(2)) {
ASSERT_EQ(pin, pins[i++]);
}
pins = { 2, 3 };
i = 0;
for (const HypernodeID& pin : hypergraph.pins(3)) {
ASSERT_EQ(pin, pins[i++]);
}
pins = { 0, 3 };
i = 0;
for (const HypernodeID& pin : hypergraph.pins(4)) {
ASSERT_EQ(pin, pins[i++]);
}
pins = { 1, 4 };
i = 0;
for (const HypernodeID& pin : hypergraph.pins(5)) {
ASSERT_EQ(pin, pins[i++]);
}
pins = { 0, 2 };
i = 0;
for (const HypernodeID& pin : hypergraph.pins(6)) {
ASSERT_EQ(pin, pins[i++]);
}
pins = { 1, 4 };
i = 0;
for (const HypernodeID& pin : hypergraph.pins(7)) {
ASSERT_EQ(pin, pins[i++]);
}
pins = { 0, 1, 4 };
i = 0;
for (const HypernodeID& pin : hypergraph.pins(8)) {
ASSERT_EQ(pin, pins[i++]);
}
pins = { 2, 3 };
i = 0;
for (const HypernodeID& pin : hypergraph.pins(9)) {
ASSERT_EQ(pin, pins[i++]);
}
pins = { 0, 1, 4 };
i = 0;
for (const HypernodeID& pin : hypergraph.pins(10)) {
ASSERT_EQ(pin, pins[i++]);
}
pins = { 2, 3 };
i = 0;
for (const HypernodeID& pin : hypergraph.pins(11)) {
ASSERT_EQ(pin, pins[i++]);
}
}
} // namespace phylo
} // namespace kahypar