016c56b583c86fcd2e6ff3b3c83d41c0 *DESCRIPTION
4dbf658a66cece1e482664c361623ea3 *NAMESPACE
c69ae08695de3cdeb406ac2278f0547c *NEWS.md
7a3e10bd093a3794306660cf2fd04ea1 *R/RcppExports.R
b9d731f5936016a7ba7d5375c83d5f38 *R/aft.R
dac5d4c17e1c90a8aa25541eb6c29c2f *R/gaussquad.R
4b9e4ce2802cb366acf838113f0840ed *R/multistate.R
f458bc45bff74d2ef387afdb23cd5416 *R/pm2-3.R
2dcc7dc889e8627b51097a393b31e9cc *R/random.R
c25903f251c81743ed181e7fd94547ad *R/read_gsm.R
46cbe305acaa8388724780efbc8d144f *R/tvc.coxph.R
820176d2e15eb0c2c599dc5baf99836e *R/vuniroot.R
0f415be5691316ba6ce22b17d496431f *R/zzz.R
bf1e7b6285e4f73dfa993c99d05a9029 *README.md
8c9ee21f56d6378ff314bea90097af68 *build/vignette.rds
8bdf762dc2ca2044f04dba37bef92a8c *data/brcancer.rda
b229556b6ba0687cf0bdd24c57f36b48 *data/colon.rda
a3e2d667791996e0c9356735415f65e5 *data/legendre.quadrature.rule.200.rda
3957834d97af33457d2dd68fef6c71ff *data/popmort.rda
81e24a15e9f72a17a41342e29a2cf041 *inst/CITATION
320cfbc312296f2ffd9714322d19d9b2 *inst/Rcpp-tests.R
804cec5211cd5c5df97a5d8ae0c48cc4 *inst/Thumbs.db
79b9b8e8cc5a75bd44781d546a1fc7bd *inst/aft.aux
2f6db5f50ef71016f3454bf468e1349d *inst/aft.pdf
9ea1e1d2fb225aa788545363a9fa1ceb *inst/competing_risks.R
ebd3ff51fbe53867321af93867f5d42e *inst/doc/Introduction.R
83e3f8817d1d77c15bde63264bbfbea8 *inst/doc/Introduction.Rnw
7344c8a7e731763af32d097c1d8e5b70 *inst/doc/Introduction.pdf
1492411d0de110db58ccf3c6049ca45f *inst/doc/SimpleGuide.R
e24e41c5b0d9294e31b5115b7ad2550a *inst/doc/SimpleGuide.Rnw
3c6d114ae95ede6a2c85cc903ec2574a *inst/doc/SimpleGuide.pdf
043e89388c47606575b1e04ccf414df0 *inst/doc/equations.html
ab5b64730204404e26d1148cadc90e3e *inst/doc/equations.org
2dd66d6d51596a96e625d4c989fde4ad *inst/doc/equations.pdf
6f3f8b04c473040111799f6eae10a26a *inst/doc/multistate.Rnw
0498c8e42d4bd070e36761e438cb75e6 *inst/doc/multistate.pdf
c1b8ada2ac988166c6ba01d29550d215 *inst/doc/predictnl.R
2a60bd5f7e5250a3280bd792104d8c35 *inst/doc/predictnl.Rnw
de015c7aed969720fdd018a458cbc396 *inst/doc/predictnl.pdf
5dc49ecb15329a32858579ff30869067 *inst/fig1-README.md.jpg
02aabc3edb266e6d2d2afd7eb6a236cd *inst/fig2-README.md.jpg
9ed62b803df1fb3c95b49b00c0ccfa85 *inst/include/aft.h
1ce66bbdb7e67a445176292022fefd57 *inst/include/c_optim.h
19f339217e7f1fadbf8d0dc0a59d068d *inst/include/gsm.h
27437a9165a52dba2299ec518a85c7c7 *inst/include/splines.h
58ce945ed81ffbd1c0857d016ff24d80 *inst/integrateRcpp.cpp
99e8a1f4459ecf25d88bbba4afec5841 *inst/integration.cpp
b2b94621371df8d9296b8bf5bec1b851 *inst/math.aux
e11cb27f90f4f836da97fa8cae84e5fa *inst/math.fdb_latexmk
8c5c30a681253755c3b2d0bc2f23b477 *inst/math.fls
479dc31165395860ffc512ea4c883a4f *inst/math.html
247e827337b630e305b763ddc8a14dcd *inst/math.input
5162cc5de37218649f409f2d1944656c *inst/math.org
d41d8cd98f00b204e9800998ecf8427e *inst/math.out
d41d8cd98f00b204e9800998ecf8427e *inst/math.toc
7ac4dd435630ac6d78591eb3d6785e91 *inst/model.bug
5663bf96027bf96e193fa9ec3f2cb546 *inst/pstpm2.out
8105582f46cf6efb0a2841512cb2b9df *inst/test.do
a79ebd513b06d3f54cf492b1b4bc22a7 *inst/tmp.cpp
38065b760b8cf9c3bb35a4d165a08184 *inst/tutorial/haz_1.png
0dbe8af6e9209421b19a81a21931c4a5 *inst/tutorial/hazz_1.png
fc51b0cdfacd5b209072f881fc72275b *inst/tutorial/histo_1.png
63048d69c3eaa686b418f99def8c0378 *inst/tutorial/histo_2.png
ed86984bdb5cf39d7bd0fce7f8540218 *inst/tutorial/surv_1.png
c4f305a1abf6a557d9a040fa84db0ac0 *inst/tutorial/surv_1_age.png
415834508af598c87e90afb7f660497d *inst/tutorial/surv_5_age.png
c514b45a0706b131fbaea9b9cfa32b6c *inst/tutorial/timevar.html
908b50255fb1ee4205dfb7c711025223 *inst/tutorial/timevar.org
e6f98a144a44fb757acfbd392d8153f5 *inst/tutorial/timevar.pdf
398e7de93ba65f1d7ccf5fc81b121127 *inst/tutorial/timevar2.html
2d0b1a2306fae549df8670d47c414326 *inst/tvc-cox.R
deeac3aaa642d5153214b9a6dff24e10 *inst/unitTests/runTests.R
fac220d92ba67c683c8418f043dc8b85 *inst/unitTests/runit.Basic.R
89c6cccb8284e900411444d4e0837c90 *inst/vintegrateRcpp.cpp
61cf0668e34d22151b2c3dee8aa56e92 *inst/vintegrateRcpp2.cpp
a79ebd513b06d3f54cf492b1b4bc22a7 *inst/vintegration.cpp
33db62447468d2ad0d4851aad93f13c5 *inst/vintegrationRcpp.cpp
3e9e76351f4729f3e6fd9804b522c6d7 *inst/working_code.R
c1c325ac04262b9cbbbccbb834aaf659 *inst/working_code.max
5a6a646b753751c531eb48f07dfd5843 *man/aft-class.Rd
7bd0e166db1bcb3fb510c6098193dd07 *man/aft.Rd
8154bfb0ad893d80828ce7ea27d45ce8 *man/bhazard.Rd
a2f6ac70f9c058c657e81be3ba854a99 *man/brcancer.Rd
13c35e79fca55fb04b03235ee81ea1e4 *man/coef.Rd
87f6cce9452c8af7d1e81440ce12e41e *man/colon.Rd
3b12a083a9ba51c9afad15bd087f4d00 *man/cox.tvc.Rd
8095619fe5137f707cb767b0a197dbff *man/eform.Rd
5c9f6cc4a2ccfe7df286a0185e7c7827 *man/grad.Rd
3997c41caed30ae48f0f242e8e09aa28 *man/gsm.Rd
096adc2aae7ede4119e3760c73fbf23d *man/gsm.control.Rd
329969741eda19239639a218b4204711 *man/gsm_design.Rd
dc1a0f3b29d80fe32a749c0e8d167ed4 *man/incrVar.Rd
b9ab5aaad7bf1723d5fdb2ce75f84993 *man/legendre.quadrature.rule.200.Rd
3f253b78cdcf4873b20677c7f3b017a9 *man/lines.Rd
ff8d07c86bf83912e19b75b4355a325a *man/markov_msm.Rd
1426b26523da181e156a4a4b67cdb06d *man/markov_sde.Rd
95539e1993943e03bbe5f357be2b4864 *man/nsx.Rd
4e50eccd5d6c55220414b0275c437c6c *man/nsxD.Rd
8dba3c4f982095ee62affef180a5371a *man/numDeltaMethod.Rd
5b2e71823619088854bc55a4a97e6c9e *man/plot-methods.Rd
b46a3500a9b89f0c4c017d3085847cc2 *man/popmort.Rd
43a11b3c875c3ee5ba6486e1032a56a2 *man/predict-methods.Rd
ae9b9caf21242ff15e697ea3780010da *man/predict.nsx.Rd
137f6a112a9b2851f32dbbc17adc4135 *man/predictnl-methods.Rd
ac95287a8c072f0d9e58bcc86e043d07 *man/predictnl.Rd
4902f9cedf8081d56abc41a29eb51644 *man/pstpm2-class.Rd
31f01de64829d04f21a66a1bc810fe27 *man/residuals-methods.Rd
3e17c475da2677b2d6c2c98623bf664e *man/rstpm2-internal.Rd
d9648124a5c8b1064c4ab3e70ffe65ec *man/simulate-methods.Rd
e786290261805ee379df9dd1cc390a16 *man/smoothpwc.Rd
bf45cdf197c8e8ff1f83d8557d558569 *man/stpm2-class.Rd
8d2ceeea788d9c76637be21d9320117d *man/tvcCoxph-class.Rd
9ca9ea5abcc9edadd38b6265196dd72c *man/update-methods.Rd
71dace9f31df2fb3aa535d97dcbdd701 *man/voptimize.Rd
e37caeaabdf54374acb44d6f48d62c59 *man/vuniroot.Rd
2d7d0e7ca55016632fb095b980fe6306 *src/Makevars
dbedfc641126921e0e48639e84fee06b *src/RcppExports.cpp
9430b8535abc39550559863e4686e25b *src/aft.cpp
70df2117d5dfc52bf14068b52961f55f *src/c_optim.cpp
33702ad1a4b5432daafa1dead35cf1a9 *src/cox_ph.cpp
0848d2cac41cdeea7c861b02f73fafea *src/gaussq2.f
897da29513339e3163572dacf06305e3 *src/gsm.cpp
8211be04f72fbfe5137d3dddafa6780c *src/laplace.f90
23ce66625d49138c45f4d3e3fd772f03 *src/multistate.cpp
a1f94e3c1ad9b4087ef1a282851f0135 *src/package_init.c
0f5fde65b894236a380e912d2614ab40 *src/pluginEstimate2.cpp
23ce836f3c4632d7ccd0db67f9aece43 *src/splines.cpp
fb558cea159d7456ecd775b8b7c0897c *src/test-nmmin.cpp
e3201bbc8bc6309e2f5c80489824e62e *src/utils.cpp
69912ad3945f097e171bb9f990443b4c *src/vintegrate.cpp
6cc25dd9878af957adbaa8976b92de76 *src/vuniroot.cpp
a0006ff6d02b9b992f9e7803c0d92779 *tests/testthat.R
e2628c32090e027812a9f6c432b594f8 *tests/testthat/test_base.R
58ea867d9f6d7bc70af4766c32c1d0f5 *tests/testthat/test_delayed.R
c5585f5fcc773972c3ff19f5a290928d *tests/testthat/test_markov_msm.R
73bd6905e511af085ccc99f7198ce5b9 *tests/testthat/test_missing.R
5f8be5a100f960d905584ff5848b5942 *tests/testthat/test_vuniroot.R
a0f02953a5908aa2def3fd5d3e02a6ed *tests/testthat/test_zeroModel.R
83e3f8817d1d77c15bde63264bbfbea8 *vignettes/Introduction.Rnw
11f742bcd8c3b318ae7d1dd26dd49417 *vignettes/SimpleGuide-004.jpg
9097148807d7489fa2ae48a2fce7c3bf *vignettes/SimpleGuide-005.jpg
7e1cb2ae97c069fe996478cf2714e1bf *vignettes/SimpleGuide-006.jpg
1eb3dc7f15001d6e6d1e0d727aa54803 *vignettes/SimpleGuide-007.jpg
e24e41c5b0d9294e31b5115b7ad2550a *vignettes/SimpleGuide.Rnw
62c49c898311183b53b31cc45ee57295 *vignettes/aft-weibull-20190816.pdf
5d6cc8b5069e59d4f6b8c65dcef4946b *vignettes/aft-weibull-los-20190816.pdf
712a3ff2a988021966ee8e00285331ae *vignettes/algorithm2e.sty
e8cb86a3640a24b9a90b4df0096ffe59 *vignettes/competing.R
6fa770e3485520a6a5f2ea7d259c8f8d *vignettes/enumitem.sty
b9564ddd59a06782310989e8f33db55e *vignettes/jsslogo.jpg
ce5ab637a1436f9c105a3e9c4777b12a *vignettes/lib.bib
2d9700127a1d4ea9406b2ab6577b8e3f *vignettes/multistate-fig-1.pdf
0ab7af8a31a6f94cc52c112afc7f9f9f *vignettes/multistate-fig-2.pdf
6f3f8b04c473040111799f6eae10a26a *vignettes/multistate.Rnw
2a60bd5f7e5250a3280bd792104d8c35 *vignettes/predictnl.Rnw
d41d8cd98f00b204e9800998ecf8427e *vignettes/test.org