Project to identify phenotypes occurring in flora files. There are three components: 1. ParseFloraFile is the original piece of code generated at the pro-iBiosphere Hackathon in Leiden. It will find PO and PATO terms in flora gabon and malaysia. 2. Lucene-based indexing: this is a refactoring of the original code that uses the Lucence indexes and analyzers. 3. MakePlantPhenotypeOntology generates a phenotype ontology from the generated descriptions. The resulting ontology is available under a CC-0 license in the `ontology` folder. All code is available under the BSD license.