""" This script creates a table with statistical values (minimum, average, standard deviation, maximum) on the run times of embedding iterations for the different data sets. Specifically, these data are compared for the accelerated iterations that use the polar quad tree acceleration structure as well as for the non-accelerated, exact hyperbolic t-SNE implementation. """ ########### # IMPORTS # ########### from pathlib import Path import pandas as pd import numpy as np #################### # READING THE DATA # #################### results_path = Path("../results/samples_per_data_set/") df = pd.read_csv(results_path.joinpath("overview.csv")) timings_dfs = [] for record in df.to_records(): timing_df = pd.read_csv(record.run_directory.replace(".", str(results_path)) + "/timings.csv") timing_df = timing_df[(timing_df.time_type == "tot_gradient")] for cn in df.columns: timing_df[cn] = record[cn] timings_dfs.append(timing_df) timings_df = pd.concat(timings_dfs, axis=0, ignore_index=True) timings_df["early_exag"] = np.repeat(False, timings_df.shape[0]) timings_df.loc[timings_df.it_n <= 250, "early_exag"] = True del timings_dfs ############################ # COMPUTING THE STATISTICS # ############################ # Work with the "equal length" data, as this splitting technique proved to be more efficient, filtering by # "equal_length" contains both accelerated and exact data. plot_times_df = timings_df.copy() plot_times_df = plot_times_df[(plot_times_df.splitting_strategy == "equal_length")] # Filter out only the exact, i.e., non-accelerated data plot_times_df_exact = plot_times_df.copy() plot_times_df_exact = plot_times_df_exact[(plot_times_df_exact.tsne_type == "exact")] # Print Min, Avg, Std, Max of the timings per dataset per size grouped = plot_times_df_exact.groupby(["dataset", "sample_size"]) print("Statistics exact:") print(grouped["total_time"].min()) print(grouped["total_time"].mean()) print(grouped["total_time"].std()) print(grouped["total_time"].max()) # Filter out only the accelerated data, i.e., the data using the polar quad tree plot_times_df_accelerated = plot_times_df.copy() plot_times_df_accelerated = plot_times_df_accelerated[(plot_times_df_accelerated.tsne_type == "accelerated")] # Print Min, Avg, Std, Max of the timings per dataset per size grouped = plot_times_df_accelerated.groupby(["dataset", "sample_size"]) print("Statistics accelerated:") print(grouped["total_time"].min()) print(grouped["total_time"].mean()) print(grouped["total_time"].std()) print(grouped["total_time"].max())