azure-piplines.yml
jobs:
- job: hera_cal
pool:
vmImage: "ubuntu-latest"
variables:
WITH_SUDO: true
steps:
- task: UsePythonVersion@0
inputs:
versionSpec: "3.12"
- bash: |
cd ../
git clone https://github.com/HERA-Team/hera_cal.git
cd s
displayName: clone hera_cal
- bash: |
pip install .
displayName: install pyuvdata
- bash: |
cd ../hera_cal
pip install .[dev]
displayName: install hera_cal
- bash: |
pip list
displayName: Environment Info
- bash: |
pytest -n auto --pyargs hera_cal
displayName: run hera_cal tests
- job: hera_qm
pool:
vmImage: "ubuntu-latest"
variables:
PYTHON: "3.10"
ENV_NAME: hera_qm_tests
WITH_SUDO: true
steps:
- bash: |
cd ../
git clone https://github.com/HERA-Team/hera_qm.git
cd s
displayName: clone hera_qm
- bash: wget -qO- https://micro.mamba.pm/api/micromamba/linux-64/latest | sudo tar -C / -xvj bin/micromamba
displayName: Install Micromamba
- bash: |
micromamba info
# need to add gxx and gcc to build novas and cython
# docstring_parser should be removed after next pyuvdata release (>2.3.2)
micromamba create --name=${ENV_NAME} python=$PYTHON gxx gcc docstring_parser -f ../hera_qm/ci/${ENV_NAME}.yml -yq
displayName: configure conda environment
- bash: |
source ./ci/_activate_current_env.sh
micromamba list -n ${ENV_NAME}
# check that the python version matches the desired one; exit immediately if not
PYVER=`python -c "import sys; print('{:d}.{:d}'.format(sys.version_info.major, sys.version_info.minor))"`
if [[ $PYVER != $PYTHON ]]; then
exit 1;
fi
displayName: Verify Mamba Config
- bash: |
source ./ci/_activate_current_env.sh
pip install --no-deps .
cd ../hera_qm
pip install --no-deps .
mkdir test-reports
python -m pytest hera_qm --junitxml=test-reports/xunit.xml -W "ignore" -W "default:::pyuvdata"
displayName: run hera_qm tests
- job: pyradiosky
pool:
vmImage: "ubuntu-latest"
variables:
PYTHON: "3.10"
ENV_NAME: full_deps
WITH_SUDO: true
steps:
- bash: |
cd ../
git clone https://github.com/RadioAstronomySoftwareGroup/pyradiosky
cd s
displayName: clone pyradiosky
- bash: wget -qO- https://micro.mamba.pm/api/micromamba/linux-64/latest | sudo tar -C / -xvj bin/micromamba
displayName: Install Micromamba
- bash: |
micromamba info
# need to add gxx and gcc to build novas and cython
# docstring_parser should be removed after next pyuvdata release (>2.3.2)
# note different spelling of yaml extension
micromamba create --name=${ENV_NAME} python=$PYTHON gxx gcc docstring_parser -f ../pyradiosky/ci/${ENV_NAME}.yaml -yq
displayName: configure conda environment
- bash: |
source ./ci/_activate_current_env.sh
micromamba list -n ${ENV_NAME}
# check that the python version matches the desired one; exit immediately if not
PYVER=`python -c "import sys; print('{:d}.{:d}'.format(sys.version_info.major, sys.version_info.minor))"`
if [[ $PYVER != $PYTHON ]]; then
exit 1;
fi
displayName: Verify Mamba Config
- bash: |
source ./ci/_activate_current_env.sh
pip install --no-deps .
cd ../pyradiosky
pip install --no-deps .
mkdir test-reports
python -m pytest --junitxml=test-reports/xunit.xml
displayName: run pyradiosky tests
- job: pyuvsim
pool:
vmImage: "ubuntu-latest"
variables:
PYTHON: "3.10"
ENV_NAME: pyuvsim_tests_openmpi
WITH_SUDO: true
steps:
- bash: |
cd ../
git clone https://github.com/RadioAstronomySoftwareGroup/pyuvsim
cd s
displayName: clone pyuvsim
- bash: wget -qO- https://micro.mamba.pm/api/micromamba/linux-64/latest | sudo tar -C / -xvj bin/micromamba
displayName: Install Micromamba
- bash: |
micromamba info
# need to add gxx and gcc to build novas and cython
# docstring_parser should be removed after next pyuvdata release (>2.3.2)
# note different spelling of yaml extension
micromamba create --name=${ENV_NAME} python=$PYTHON gxx gcc docstring_parser -f ../pyuvsim/ci/${ENV_NAME}.yaml -yq
displayName: configure conda environment
- bash: |
source ./ci/_activate_current_env.sh
micromamba list -n ${ENV_NAME}
# check that the python version matches the desired one; exit immediately if not
PYVER=`python -c "import sys; print('{:d}.{:d}'.format(sys.version_info.major, sys.version_info.minor))"`
if [[ $PYVER != $PYTHON ]]; then
exit 1;
fi
displayName: Verify Mamba Config
- bash: |
source ./ci/_activate_current_env.sh
pip install --no-deps .
cd ../pyuvsim
pip install --no-deps .
mkdir test-reports
python -m pytest pyuvsim --junitxml=test-reports/xunit.xml
displayName: run pyuvsim tests
- job: SSINS
pool:
vmImage: "ubuntu-latest"
variables:
PYTHON: "3.10"
ENV_NAME: SSINS_tests
WITH_SUDO: true
steps:
- bash: |
cd ../
git clone https://github.com/mwilensky768/SSINS
cd s
displayName: clone SSINS
- bash: wget -qO- https://micro.mamba.pm/api/micromamba/linux-64/latest | sudo tar -C / -xvj bin/micromamba
displayName: Install Micromamba
- bash: |
micromamba info
# need to add gxx and gcc to build novas and cython
# docstring_parser should be removed after next pyuvdata release (>2.3.2)
# note different spelling of yaml extension
micromamba create --name=${ENV_NAME} python=$PYTHON gxx gcc docstring_parser -f ../SSINS/ci/${ENV_NAME}.yml -yq
displayName: configure conda environment
- bash: |
source ./ci/_activate_current_env.sh
micromamba list -n ${ENV_NAME}
# check that the python version matches the desired one; exit immediately if not
PYVER=`python -c "import sys; print('{:d}.{:d}'.format(sys.version_info.major, sys.version_info.minor))"`
if [[ $PYVER != $PYTHON ]]; then
exit 1;
fi
displayName: Verify Mamba Config
- bash: |
source ./ci/_activate_current_env.sh
pip install --no-deps .
cd ../SSINS
pip install --no-deps .
mkdir test-reports
python -m pytest SSINS --junitxml=test-reports/xunit.xml
displayName: run SSINS tests