SparseDiscPhaseVar.html
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<div class="subTitle">jphase</div>
<h2 title="Class SparseDiscPhaseVar" class="title">Class SparseDiscPhaseVar</h2>
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<li>java.lang.Object</li>
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<li><a href="../jphase/AbstractDiscPhaseVar.html" title="class in jphase">jphase.AbstractDiscPhaseVar</a></li>
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<li>jphase.SparseDiscPhaseVar</li>
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<dt>All Implemented Interfaces:</dt>
<dd><a href="../jmarkov/basic/JMarkovElement.html" title="interface in jmarkov.basic">JMarkovElement</a>, <a href="../jphase/DiscPhaseVar.html" title="interface in jphase">DiscPhaseVar</a>, <a href="../jphase/PhaseVar.html" title="interface in jphase">PhaseVar</a></dd>
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<pre>public class <span class="strong">SparseDiscPhaseVar</span>
extends <a href="../jphase/AbstractDiscPhaseVar.html" title="class in jphase">AbstractDiscPhaseVar</a></pre>
<div class="block">This class allows the creation and manipulation
of Discrete Phase-type distributions represented by
sparse (Flexible Compressed Row) matrices.</div>
<dl><dt><span class="strong">Version:</span></dt>
<dd>1.0</dd>
<dt><span class="strong">Author:</span></dt>
<dd>German Riańo, Juan F. Perez</dd></dl>
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<th class="colOne" scope="col">Constructor and Description</th>
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<td class="colOne"><code><strong><a href="../jphase/SparseDiscPhaseVar.html#SparseDiscPhaseVar(double[], double[][])">SparseDiscPhaseVar</a></strong>(double[] alpha,
double[][] A)</code>
<div class="block">Constructs a discrete Phase-type Distribution
with sparse representation (FlexCompRowMatrix)</div>
</td>
</tr>
<tr class="rowColor">
<td class="colOne"><code><strong><a href="../jphase/SparseDiscPhaseVar.html#SparseDiscPhaseVar(int)">SparseDiscPhaseVar</a></strong>(int n)</code>
<div class="block">Constructs an empty Discrete Phase-type Distribution
of size n with sparse representation (FlexCompRowMatrix)</div>
</td>
</tr>
<tr class="altColor">
<td class="colOne"><code><strong><a href="../jphase/SparseDiscPhaseVar.html#SparseDiscPhaseVar(no.uib.cipr.matrix.sparse.SparseVector, no.uib.cipr.matrix.sparse.FlexCompRowMatrix)">SparseDiscPhaseVar</a></strong>(no.uib.cipr.matrix.sparse.SparseVector alpha,
no.uib.cipr.matrix.sparse.FlexCompRowMatrix A)</code>
<div class="block">Constructs a discrete Phase-type Distribution
with sparse representation (FlexCompRowMatrix)</div>
</td>
</tr>
<tr class="rowColor">
<td class="colOne"><code><strong><a href="../jphase/SparseDiscPhaseVar.html#SparseDiscPhaseVar(no.uib.cipr.matrix.Vector, no.uib.cipr.matrix.Matrix)">SparseDiscPhaseVar</a></strong>(no.uib.cipr.matrix.Vector alpha,
no.uib.cipr.matrix.Matrix A)</code>
<div class="block">Constructs a discrete Phase-type Distribution
with sparse representation (FlexCompRowMatrix)</div>
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<th class="colFirst" scope="col">Modifier and Type</th>
<th class="colLast" scope="col">Method and Description</th>
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<td class="colFirst"><code><a href="../jphase/DiscPhaseVar.html" title="interface in jphase">DiscPhaseVar</a></code></td>
<td class="colLast"><code><strong><a href="../jphase/SparseDiscPhaseVar.html#copy()">copy</a></strong>()</code>
<div class="block">Creates a deep copy of the original Phase-Type Variable</div>
</td>
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<td class="colFirst"><code>no.uib.cipr.matrix.Matrix</code></td>
<td class="colLast"><code><strong><a href="../jphase/SparseDiscPhaseVar.html#getMatrix()">getMatrix</a></strong>()</code>
<div class="block">Returns the transition matrix of the Phase-Type Distribution</div>
</td>
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<td class="colFirst"><code>no.uib.cipr.matrix.Vector</code></td>
<td class="colLast"><code><strong><a href="../jphase/SparseDiscPhaseVar.html#getVector()">getVector</a></strong>()</code>
<div class="block">Returns the initial probability mass vector</div>
</td>
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<td class="colFirst"><code><a href="../jphase/DiscPhaseVar.html" title="interface in jphase">DiscPhaseVar</a></code></td>
<td class="colLast"><code><strong><a href="../jphase/SparseDiscPhaseVar.html#newVar(int)">newVar</a></strong>(int n)</code>
<div class="block">Creates a new variable of the same class of the original
Discrete Phase-Type Variable</div>
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<td class="colFirst"><code>void</code></td>
<td class="colLast"><code><strong><a href="../jphase/SparseDiscPhaseVar.html#setMatrix(no.uib.cipr.matrix.Matrix)">setMatrix</a></strong>(no.uib.cipr.matrix.Matrix A)</code>
<div class="block">Sets the transition matrix of the Phase-type distribution to be A</div>
</td>
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<td class="colFirst"><code>void</code></td>
<td class="colLast"><code><strong><a href="../jphase/SparseDiscPhaseVar.html#setVector(no.uib.cipr.matrix.Vector)">setVector</a></strong>(no.uib.cipr.matrix.Vector alpha)</code>
<div class="block">Sets the initial probability vector to be alpha</div>
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<h3>Methods inherited from class jphase.<a href="../jphase/AbstractDiscPhaseVar.html" title="class in jphase">AbstractDiscPhaseVar</a></h3>
<code><a href="../jphase/AbstractDiscPhaseVar.html#cdf(double)">cdf</a>, <a href="../jphase/AbstractDiscPhaseVar.html#cdf(int, double)">cdf</a>, <a href="../jphase/AbstractDiscPhaseVar.html#CV()">CV</a>, <a href="../jphase/AbstractDiscPhaseVar.html#description()">description</a>, <a href="../jphase/AbstractDiscPhaseVar.html#expectedValue()">expectedValue</a>, <a href="../jphase/AbstractDiscPhaseVar.html#getMat0()">getMat0</a>, <a href="../jphase/AbstractDiscPhaseVar.html#getMat0Array()">getMat0Array</a>, <a href="../jphase/AbstractDiscPhaseVar.html#getMatrixArray()">getMatrixArray</a>, <a href="../jphase/AbstractDiscPhaseVar.html#getNumPhases()">getNumPhases</a>, <a href="../jphase/AbstractDiscPhaseVar.html#getVec0()">getVec0</a>, <a href="../jphase/AbstractDiscPhaseVar.html#getVectorArray()">getVectorArray</a>, <a href="../jphase/AbstractDiscPhaseVar.html#label()">label</a>, <a href="../jphase/AbstractDiscPhaseVar.html#lossFunction1(double)">lossFunction1</a>, <a href="../jphase/AbstractDiscPhaseVar.html#lossFunction2(double)">lossFunction2</a>, <a href="../jphase/AbstractDiscPhaseVar.html#max(jphase.DiscPhaseVar)">max</a>, <a href="../jphase/AbstractDiscPhaseVar.html#max(jphase.DiscPhaseVar, jphase.DiscPhaseVar)">max</a>, <a href="../jphase/AbstractDiscPhaseVar.html#median()">median</a>, <a href="../jphase/AbstractDiscPhaseVar.html#min(jphase.DiscPhaseVar)">min</a>, <a href="../jphase/AbstractDiscPhaseVar.html#min(jphase.DiscPhaseVar, jphase.DiscPhaseVar)">min</a>, <a href="../jphase/AbstractDiscPhaseVar.html#mix(double, jphase.DiscPhaseVar)">mix</a>, <a href="../jphase/AbstractDiscPhaseVar.html#mix(double, jphase.DiscPhaseVar, jphase.DiscPhaseVar)">mix</a>, <a href="../jphase/AbstractDiscPhaseVar.html#moment(int)">moment</a>, <a href="../jphase/AbstractDiscPhaseVar.html#pmf(int)">pmf</a>, <a href="../jphase/AbstractDiscPhaseVar.html#pmf(int, int)">pmf</a>, <a href="../jphase/AbstractDiscPhaseVar.html#prob(double, double)">prob</a>, <a href="../jphase/AbstractDiscPhaseVar.html#quantil(double)">quantil</a>, <a href="../jphase/AbstractDiscPhaseVar.html#stdDeviation()">stdDeviation</a>, <a href="../jphase/AbstractDiscPhaseVar.html#sum(jphase.DiscPhaseVar)">sum</a>, <a href="../jphase/AbstractDiscPhaseVar.html#sum(jphase.DiscPhaseVar, jphase.DiscPhaseVar)">sum</a>, <a href="../jphase/AbstractDiscPhaseVar.html#sumGeom(double)">sumGeom</a>, <a href="../jphase/AbstractDiscPhaseVar.html#sumPH(jphase.DiscPhaseVar)">sumPH</a>, <a href="../jphase/AbstractDiscPhaseVar.html#sumPH(jphase.DiscPhaseVar, jphase.DiscPhaseVar)">sumPH</a>, <a href="../jphase/AbstractDiscPhaseVar.html#survival(double)">survival</a>, <a href="../jphase/AbstractDiscPhaseVar.html#survival(int, double)">survival</a>, <a href="../jphase/AbstractDiscPhaseVar.html#toString()">toString</a>, <a href="../jphase/AbstractDiscPhaseVar.html#variance()">variance</a></code></li>
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<h3>Methods inherited from class java.lang.Object</h3>
<code>equals, getClass, hashCode, notify, notifyAll, wait, wait, wait</code></li>
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<h3>Methods inherited from interface jmarkov.basic.<a href="../jmarkov/basic/JMarkovElement.html" title="interface in jmarkov.basic">JMarkovElement</a></h3>
<code><a href="../jmarkov/basic/JMarkovElement.html#equals(java.lang.Object)">equals</a></code></li>
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<h4>SparseDiscPhaseVar</h4>
<pre>public SparseDiscPhaseVar(int n)</pre>
<div class="block">Constructs an empty Discrete Phase-type Distribution
of size n with sparse representation (FlexCompRowMatrix)</div>
<dl><dt><span class="strong">Parameters:</span></dt><dd><code>n</code> - size of the Discrete Phase-type Distribution</dd></dl>
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<h4>SparseDiscPhaseVar</h4>
<pre>public SparseDiscPhaseVar(no.uib.cipr.matrix.sparse.SparseVector alpha,
no.uib.cipr.matrix.sparse.FlexCompRowMatrix A)</pre>
<div class="block">Constructs a discrete Phase-type Distribution
with sparse representation (FlexCompRowMatrix)</div>
<dl><dt><span class="strong">Parameters:</span></dt><dd><code>A</code> - transition probability matrix</dd><dd><code>alpha</code> - initial probability distribution vector</dd></dl>
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<h4>SparseDiscPhaseVar</h4>
<pre>public SparseDiscPhaseVar(no.uib.cipr.matrix.Vector alpha,
no.uib.cipr.matrix.Matrix A)</pre>
<div class="block">Constructs a discrete Phase-type Distribution
with sparse representation (FlexCompRowMatrix)</div>
<dl><dt><span class="strong">Parameters:</span></dt><dd><code>A</code> - transition probability matrix</dd><dd><code>alpha</code> - initial probability distribution vector</dd></dl>
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<pre>public SparseDiscPhaseVar(double[] alpha,
double[][] A)</pre>
<div class="block">Constructs a discrete Phase-type Distribution
with sparse representation (FlexCompRowMatrix)</div>
<dl><dt><span class="strong">Parameters:</span></dt><dd><code>A</code> - transition probability matrix</dd><dd><code>alpha</code> - initial probability distribution vector</dd></dl>
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<h4>getMatrix</h4>
<pre>public no.uib.cipr.matrix.Matrix getMatrix()</pre>
<div class="block"><strong>Description copied from interface: <code><a href="../jphase/PhaseVar.html#getMatrix()">PhaseVar</a></code></strong></div>
<div class="block">Returns the transition matrix of the Phase-Type Distribution</div>
<dl><dt><span class="strong">Returns:</span></dt><dd>Transition matrix for transient states of the
Phase-Type Distribution</dd><dt><span class="strong">See Also:</span></dt><dd><a href="../jphase/PhaseVar.html#getMatrix()"><code>PhaseVar.getMatrix()</code></a></dd></dl>
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<h4>setMatrix</h4>
<pre>public void setMatrix(no.uib.cipr.matrix.Matrix A)</pre>
<div class="block"><strong>Description copied from interface: <code><a href="../jphase/PhaseVar.html#setMatrix(no.uib.cipr.matrix.Matrix)">PhaseVar</a></code></strong></div>
<div class="block">Sets the transition matrix of the Phase-type distribution to be A</div>
<dl><dt><span class="strong">Parameters:</span></dt><dd><code>A</code> - Transition matrix for the transient states of the
Phase-Type Distribution</dd><dt><span class="strong">See Also:</span></dt><dd><a href="../jphase/PhaseVar.html#setMatrix(no.uib.cipr.matrix.Matrix)"><code>PhaseVar.setMatrix(no.uib.cipr.matrix.Matrix)</code></a></dd></dl>
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<h4>getVector</h4>
<pre>public no.uib.cipr.matrix.Vector getVector()</pre>
<div class="block"><strong>Description copied from interface: <code><a href="../jphase/PhaseVar.html#getVector()">PhaseVar</a></code></strong></div>
<div class="block">Returns the initial probability mass vector</div>
<dl><dt><span class="strong">Returns:</span></dt><dd>Initial probability mass vector</dd><dt><span class="strong">See Also:</span></dt><dd><a href="../jphase/PhaseVar.html#getVector()"><code>PhaseVar.getVector()</code></a></dd></dl>
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<h4>setVector</h4>
<pre>public void setVector(no.uib.cipr.matrix.Vector alpha)</pre>
<div class="block"><strong>Description copied from interface: <code><a href="../jphase/PhaseVar.html#setVector(no.uib.cipr.matrix.Vector)">PhaseVar</a></code></strong></div>
<div class="block">Sets the initial probability vector to be alpha</div>
<dl><dt><span class="strong">Parameters:</span></dt><dd><code>alpha</code> - Initial probability mass vector</dd><dt><span class="strong">See Also:</span></dt><dd><a href="../jphase/PhaseVar.html#setVector(no.uib.cipr.matrix.Vector)"><code>PhaseVar.setVector(no.uib.cipr.matrix.Vector)</code></a></dd></dl>
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<h4>copy</h4>
<pre>public <a href="../jphase/DiscPhaseVar.html" title="interface in jphase">DiscPhaseVar</a> copy()</pre>
<div class="block"><strong>Description copied from interface: <code><a href="../jphase/DiscPhaseVar.html#copy()">DiscPhaseVar</a></code></strong></div>
<div class="block">Creates a deep copy of the original Phase-Type Variable</div>
<dl><dt><span class="strong">Returns:</span></dt><dd>A deep copy of the original Phase-Type Variable</dd><dt><span class="strong">See Also:</span></dt><dd><a href="../jphase/ContPhaseVar.html#copy()"><code>ContPhaseVar.copy()</code></a></dd></dl>
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<pre>public <a href="../jphase/DiscPhaseVar.html" title="interface in jphase">DiscPhaseVar</a> newVar(int n)</pre>
<div class="block"><strong>Description copied from interface: <code><a href="../jphase/DiscPhaseVar.html#newVar(int)">DiscPhaseVar</a></code></strong></div>
<div class="block">Creates a new variable of the same class of the original
Discrete Phase-Type Variable</div>
<dl><dt><span class="strong">Parameters:</span></dt><dd><code>n</code> - number of Phases of the new Variable</dd>
<dt><span class="strong">Returns:</span></dt><dd>A new variable of the same class of the original
Discrete Phase-Type Variable</dd></dl>
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