https://github.com/samsydco/HBN
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Tip revision: 278127d07b721c73679c11d0d1836631df778323 authored by samsydco on 16 May 2022, 17:49:03 UTC
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Tip revision: 278127d
environment.yml
name: scohen_brainiak_env_0.8
channels:
  - anaconda
  - https://repo.anaconda.com/pkgs/free
  - pni
  - brainiak
  - defaults
  - conda-forge
dependencies:
  - _ipyw_jlab_nb_ext_conf=0.1.0=py36he11e457_0
  - _libgcc_mutex=0.1=main
  - _r-mutex=1.0.0=mro_2
  - alabaster=0.7.10=py36h306e16b_0
  - anaconda-client=1.6.14=py36_0
  - anaconda-navigator=1.8.7=py36_0
  - anaconda-project=0.8.2=py36h44fb852_0
  - argh=0.26.2=py36_1001
  - asn1crypto=0.24.0=py36_0
  - astroid=1.6.3=py36_0
  - astropy=3.0.2=py36h3010b51_1
  - attrs=18.1.0=py36_0
  - babel=2.5.3=py36_0
  - backcall=0.1.0=py36_0
  - backports=1.0=py36hfa02d7e_1
  - backports.shutil_get_terminal_size=1.0.0=py36hfea85ff_2
  - beautifulsoup4=4.6.0=py36h49b8c8c_1
  - binutils_impl_linux-64=2.28.1=had2808c_3
  - binutils_linux-64=7.2.0=had2808c_27
  - bitarray=0.8.1=py36h14c3975_1
  - bkcharts=0.2=py36h735825a_0
  - blas=1.0=mkl
  - blaze=0.11.3=py36h4e06776_0
  - bleach=2.1.3=py36_0
  - blosc=1.14.3=hdbcaa40_0
  - bokeh=0.12.16=py36_0
  - boto=2.48.0=py36h6e4cd66_1
  - bottleneck=1.2.1=py36haac1ea0_0
  - brainiak_tutorials=0.3=0
  - bz2file=0.98=py36_1
  - bzip2=1.0.6=h14c3975_5
  - ca-certificates=2018.03.07=0
  - cairo=1.14.12=h8948797_3
  - certifi=2020.6.20=py36h9f0ad1d_0
  - cffi=1.11.5=py36h9745a5d_0
  - chardet=3.0.4=py36h0f667ec_1
  - click=6.7=py36h5253387_0
  - cloudpickle=0.5.3=py36_0
  - clyent=1.2.2=py36h7e57e65_1
  - colorama=0.3.9=py36h489cec4_0
  - conda=4.8.3=py36_0
  - conda-build=3.10.5=py36_0
  - conda-env=2.6.0=h36134e3_1
  - conda-package-handling=1.6.0=py36h7b6447c_0
  - conda-verify=2.0.0=py36h98955d8_0
  - contextlib2=0.5.5=py36h6c84a62_0
  - cryptography=2.2.2=py36h14c3975_0
  - curl=7.60.0=h84994c4_0
  - cycler=0.10.0=py36_0
  - cython=0.28.2=py36h14c3975_0
  - cytoolz=0.9.0.1=py36h14c3975_0
  - dask=0.17.5=py36_0
  - dask-core=0.17.5=py36_0
  - datashape=0.5.4=py36h3ad6b5c_0
  - dbus=1.13.2=h714fa37_1
  - decorator=4.3.0=py36_0
  - distributed=1.21.8=py36_0
  - docutils=0.14=py36hb0f60f5_0
  - entrypoints=0.2.3=py36h1aec115_2
  - et_xmlfile=1.0.1=py36hd6bccc3_0
  - expat=2.2.5=he0dffb1_0
  - fastcache=1.0.2=py36h14c3975_2
  - filelock=3.0.4=py36_0
  - flask=1.0.2=py36_1
  - flask-cors=3.0.4=py36_0
  - fontconfig=2.13.0=h9420a91_0
  - freetype=2.9.1=h8a8886c_1
  - fribidi=1.0.9=h7b6447c_0
  - gcc_impl_linux-64=7.2.0=habb00fd_3
  - gcc_linux-64=7.2.0=h550dcbe_27
  - get_terminal_size=1.0.0=haa9412d_0
  - gevent=1.3.0=py36h14c3975_0
  - gfortran_impl_linux-64=7.2.0=hdf63c60_3
  - gfortran_linux-64=7.2.0=h550dcbe_27
  - glib=2.56.1=h000015b_0
  - glob2=0.6=py36he249c77_0
  - gmp=6.1.2=h6c8ec71_1
  - gmpy2=2.0.8=py36hc8893dd_2
  - graphite2=1.3.11=h16798f4_2
  - greenlet=0.4.13=py36h14c3975_0
  - gst-plugins-base=1.14.0=hbbd80ab_1
  - gstreamer=1.14.0=hb453b48_1
  - gxx_impl_linux-64=7.2.0=hdf63c60_3
  - gxx_linux-64=7.2.0=h550dcbe_27
  - h5py=2.8.0=py36h989c5e5_3
  - harfbuzz=1.8.8=hffaf4a1_0
  - hdf5=1.10.2=hba1933b_1
  - heapdict=1.0.0=py36_2
  - html5lib=1.0.1=py36h2f9c1c0_0
  - icu=58.2=h9c2bf20_1
  - idna=2.6=py36h82fb2a8_1
  - imageio=2.3.0=py36_0
  - imagesize=1.0.0=py36_0
  - intel-openmp=2018.0.0=8
  - ipympl=0.2.1=py36_1000
  - ipython=6.4.0=py36_0
  - ipython_genutils=0.2.0=py36hb52b0d5_0
  - ipywidgets=7.5.1=py_0
  - isort=4.3.4=py36_0
  - itsdangerous=0.24=py36h93cc618_1
  - jbig=2.1=hdba287a_0
  - jdcal=1.4=py36_0
  - jedi=0.12.0=py36_1
  - jinja2=2.10=py36ha16c418_0
  - jpeg=9b=h024ee3a_2
  - json5=0.9.4=py_0
  - jsonschema=2.6.0=py36h006f8b5_0
  - jupyter=1.0.0=py36_7
  - jupyter_client=5.2.3=py36_0
  - jupyter_console=5.2.0=py36he59e554_1
  - jupyter_core=4.4.0=py36h7c827e3_0
  - jupyterlab=1.2.6=pyhf63ae98_0
  - jupyterlab_launcher=0.10.5=py36_0
  - jupyterlab_server=1.0.0=py_0
  - kiwisolver=1.0.1=py36hf484d3e_0
  - lazy-object-proxy=1.3.1=py36h10fcdad_0
  - libcurl=7.60.0=h1ad7b7a_0
  - libedit=3.1.20181209=hc058e9b_0
  - libffi=3.2.1=hd88cf55_4
  - libgcc-ng=9.1.0=hdf63c60_0
  - libgfortran-ng=7.2.0=hdf63c60_3
  - libgpuarray=0.7.6=h14c3975_0
  - libpng=1.6.37=hbc83047_0
  - libsodium=1.0.16=h1bed415_0
  - libssh2=1.8.0=h9cfc8f7_4
  - libstdcxx-ng=9.1.0=hdf63c60_0
  - libtiff=4.0.9=he85c1e1_1
  - libtool=2.4.6=h544aabb_3
  - libuuid=1.0.3=h1bed415_2
  - libxcb=1.13=h1bed415_1
  - libxml2=2.9.9=hea5a465_1
  - libxslt=1.1.32=h1312cb7_0
  - llvm-meta=7.0.0=0
  - llvmlite=0.23.1=py36hdbcaa40_0
  - locket=0.2.0=py36h787c0ad_1
  - lxml=4.2.1=py36h23eabaa_0
  - lzo=2.10=h49e0be7_2
  - make=4.2.1=h1bed415_1
  - markupsafe=1.0=py36hd9260cd_1
  - mccabe=0.6.1=py36h5ad9710_1
  - mistune=0.8.3=py36h14c3975_1
  - mkl=2018.0.2=1
  - mkl-service=1.1.2=py36h17a0993_4
  - mkl_fft=1.0.1=py36h3010b51_0
  - mkl_random=1.0.1=py36h629b387_0
  - more-itertools=4.1.0=py36_0
  - mpc=1.0.3=hec55b23_5
  - mpfr=3.1.5=h11a74b3_2
  - mpi4py=2.0.0=py36_2
  - mpich2=1.4.1p1=0
  - mpmath=1.0.0=py36hfeacd6b_2
  - mro-base=3.5.0=h1c2f66e_0
  - msgpack-python=0.5.6=py36h6bb024c_0
  - multipledispatch=0.5.0=py36_0
  - navigator-updater=0.2.1=py36_0
  - nbconvert=5.3.1=py36hb41ffb7_0
  - nbformat=4.4.0=py36h31c9010_0
  - ncurses=6.1=hf484d3e_0
  - networkx=2.1=py36_0
  - nibabel=2.5.1=py_0
  - nitime=0.7=py36h3010b51_1002
  - nltk=3.3.0=py36_0
  - nodejs=8.11.3=hf484d3e_0
  - nose=1.3.7=py36hcdf7029_2
  - notebook=5.7.8=py36_0
  - numba=0.38.0=py36h637b7d7_0
  - numexpr=2.6.5=py36h7bf3b9c_0
  - numpydoc=0.8.0=py36_0
  - nxviz=0.6.1=py36_1
  - odo=0.5.1=py36h90ed295_0
  - olefile=0.45.1=py36_0
  - openmp=7.0.0=h2d50403_0
  - openpyxl=2.5.3=py36_0
  - openssl=1.0.2u=h516909a_0
  - packaging=17.1=py36_0
  - palettable=3.3.0=py_0
  - pandas=0.23.4=py36h04863e7_0
  - pandoc=1.19.2.1=hea2e7c5_1
  - pandocfilters=1.4.2=py36ha6701b7_1
  - pango=1.42.3=h8589676_0
  - parso=0.2.0=py36_0
  - partd=0.3.8=py36h36fd896_0
  - patchelf=0.9=hf79760b_2
  - path.py=11.0.1=py36_0
  - pathlib2=2.3.2=py36_0
  - pathtools=0.1.2=py_1
  - patsy=0.5.1=py36_0
  - pcre=8.42=h439df22_0
  - pep8=1.7.1=py36_0
  - pexpect=4.5.0=py36_0
  - pickleshare=0.7.4=py36h63277f8_0
  - pillow=5.1.0=py36h3deb7b8_0
  - pixman=0.34.0=hceecf20_3
  - pkginfo=1.4.2=py36_1
  - pluggy=0.6.0=py36hb689045_0
  - ply=3.11=py36_0
  - prometheus_client=0.7.1=py_0
  - prompt_toolkit=1.0.15=py36h17d85b1_0
  - psutil=5.4.5=py36h14c3975_0
  - ptyprocess=0.5.2=py36h69acd42_0
  - py=1.5.3=py36_0
  - pybind11=2.2.4=py36h2d50403_1
  - pycodestyle=2.4.0=py36_0
  - pycosat=0.6.3=py36h0a5515d_0
  - pycparser=2.18=py36hf9f622e_1
  - pycrypto=2.6.1=py36h14c3975_8
  - pycurl=7.43.0.1=py36hb7f436b_0
  - pydicom=1.2.1=py_0
  - pyflakes=1.6.0=py36h7bd6a15_0
  - pygments=2.6.1=py_0
  - pygpu=0.7.6=py36h035aef0_0
  - pylint=1.8.4=py36_0
  - pyodbc=4.0.23=py36hf484d3e_0
  - pyopenssl=18.0.0=py36_0
  - pyparsing=2.4.2=py_0
  - pyqt=5.9.2=py36h22d08a2_0
  - pysocks=1.6.8=py36_0
  - pytables=3.4.4=py36ha205bf6_0
  - pytest=3.5.1=py36_0
  - pytest-arraydiff=0.2=py36_0
  - pytest-astropy=0.3.0=py36_0
  - pytest-doctestplus=0.1.3=py36_0
  - pytest-openfiles=0.3.0=py36_0
  - pytest-remotedata=0.2.1=py36_0
  - python=3.6.6=hc3d631a_0
  - python-dateutil=2.8.0=py36_0
  - python_abi=3.6=1_cp36m
  - pytz=2019.2=py_0
  - pywavelets=0.5.2=py36he602eb0_0
  - pyyaml=3.12=py36hafb9ca4_1
  - qt=5.9.6=h52aff34_0
  - qtawesome=0.4.4=py36h609ed8c_0
  - qtconsole=4.3.1=py36h8f73b5b_0
  - qtpy=1.4.1=py36_0
  - r-assertthat=0.2.0=mro350h576908c_0
  - r-bh=1.66.0_1=mro350h576908c_0
  - r-bindr=0.1.1=mro350h576908c_0
  - r-bindrcpp=0.2.2=mro350hc05d2f9_0
  - r-bit=1.1_12=mro350hbc2858b_0
  - r-bit64=0.9_7=mro350hbc2858b_0
  - r-blob=1.1.1=mro350h576908c_0
  - r-cli=1.0.0=mro350h576908c_0
  - r-crayon=1.3.4=mro350h576908c_0
  - r-dbi=1.0.0=mro350h576908c_0
  - r-dbplyr=1.2.1=mro350h576908c_0
  - r-digest=0.6.15=mro350hbc2858b_0
  - r-dplyr=0.7.5=mro350hc05d2f9_0
  - r-glue=1.2.0=mro350hbc2858b_0
  - r-lattice=0.20_35=mro350_0
  - r-lme4=1.1_17=mro350hc05d2f9_0
  - r-magrittr=1.5=mro350h576908c_0
  - r-mass=7.3_49=mro350_0
  - r-matrix=1.2_14=mro350_0
  - r-memoise=1.1.0=mro350h576908c_0
  - r-minqa=1.2.4=mro350hac86c6c_0
  - r-nlme=3.1_137=mro350_0
  - r-nloptr=1.0.4=mro350hc05d2f9_0
  - r-pillar=1.2.3=mro350h576908c_0
  - r-pkgconfig=2.0.1=mro350h576908c_0
  - r-plogr=0.2.0=mro350h576908c_0
  - r-prettyunits=1.0.2=mro350h576908c_0
  - r-purrr=0.2.4=mro350hbc2858b_0
  - r-r6=2.2.2=mro350_0
  - r-rcpp=0.12.17=mro350hc05d2f9_0
  - r-rcppeigen=0.3.3.4.0=mro350hac86c6c_0
  - r-rlang=0.2.0=mro350hbc2858b_0
  - r-rsqlite=2.1.1=mro350hc05d2f9_0
  - r-tibble=1.4.2=mro350hbc2858b_0
  - r-tidyselect=0.2.4=mro350hc05d2f9_0
  - r-utf8=1.1.4=mro350hbc2858b_0
  - readline=7.0=h7b6447c_5
  - requests=2.18.4=py36he2e5f8d_1
  - rope=0.10.7=py36h147e2ec_0
  - rpy2=2.9.3=py36mro350h035aef0_0
  - ruamel_yaml=0.15.35=py36h14c3975_1
  - scikit-image=0.13.1=py36h14c3975_1
  - seaborn=0.9.0=py36_0
  - send2trash=1.5.0=py36_0
  - setuptools=41.0.1=py36_0
  - simplegeneric=0.8.1=py36_2
  - singledispatch=3.4.0.3=py36h7a266c3_0
  - sip=4.19.8=py36hf484d3e_0
  - six=1.12.0=py36_0
  - snappy=1.1.7=hbae5bb6_3
  - snowballstemmer=1.2.1=py36h6febd40_0
  - sortedcollections=0.6.1=py36_0
  - sortedcontainers=1.5.10=py36_0
  - sphinx=1.7.4=py36_0
  - sphinxcontrib=1.0=py36h6d0f590_1
  - sphinxcontrib-websupport=1.0.1=py36hb5cb234_1
  - spyder=3.2.8=py36_0
  - sqlalchemy=1.2.7=py36h6b74fdf_0
  - sqlite=3.29.0=h7b6447c_0
  - statsmodels=0.10.1=py36hdd07704_0
  - sympy=1.1.1=py36hc6d1c1c_0
  - tbb=2018.0.4=h6bb024c_1
  - tbb4py=2018.0.4=py36h6bb024c_1
  - tblib=1.3.2=py36h34cf8b6_0
  - terminado=0.8.1=py36_1
  - testpath=0.3.1=py36h8cadb63_0
  - theano=1.0.2=py36h6bb024c_0
  - tk=8.6.8=hbc83047_0
  - toolz=0.9.0=py36_0
  - tqdm=4.31.1=py_0
  - traitlets=4.3.2=py36h674d592_0
  - typing=3.6.4=py36_0
  - unicodecsv=0.14.1=py36ha668878_0
  - unixodbc=2.3.6=h1bed415_0
  - urllib3=1.22=py36hbe7ace6_0
  - watchdog=0.9.0=py36_1
  - wcwidth=0.1.7=py36hdf4376a_0
  - webencodings=0.5.1=py36h800622e_1
  - werkzeug=0.14.1=py36_0
  - wheel=0.33.4=py36_0
  - wrapt=1.10.11=py36h28b7045_0
  - xlrd=1.1.0=py36h1db9f0c_1
  - xlsxwriter=1.0.4=py36_0
  - xlwt=1.3.0=py36h7b00a1f_0
  - xz=5.2.4=h14c3975_4
  - yaml=0.1.7=had09818_2
  - zeromq=4.2.5=h439df22_0
  - zict=0.1.3=py36h3a3bf81_0
  - zlib=1.2.11=h7b6447c_3
  - pip:
    - brainiak==0.7.1
    - deepdish==0.3.6
    - ipydatawidgets==4.0.1
    - ipykernel==5.1.2
    - ipyvolume==0.5.2
    - ipywebrtc==0.5.0
    - mako==1.0.7
    - matplotlib==3.1.1
    - mock==3.0.5
    - nilearn==0.5.0
    - niwidgets==0.2.2
    - numpy==1.15.4
    - pip==19.0.3
    - ppca==0.0.4
    - pythreejs==2.1.1
    - pyzmq==17.0.0
    - scikit-learn==0.20.4
    - scipy==1.3.2
    - tables==3.5.1
    - tornado==5.0.2
    - traittypes==0.2.1
    - widgetsnbextension==3.2.1
prefix: /home/scohen/.conda/envs/scohen_brainiak_env_0.8
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