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145 | import shutil
import pytest
from pathlib import Path
import numpy as np
from pyrate.core import config as cf
from pyrate import conv2tif, prepifg
from pyrate.configuration import Configuration
from tests.common import (
assert_two_dirs_equal,
manipulate_test_conf,
TRAVIS,
PYTHON3P6,
PYTHON3P7,
)
@pytest.fixture(params=[1, 2, 3, 4])
def local_crop(request):
return request.param
@pytest.fixture()
def modified_config_short(tempdir, local_crop, get_lks, coh_mask):
orbfit_lks = 1
orbfit_method = 1
orbfit_degrees = 1
ref_est_method = 1
def modify_params(conf_file, parallel, output_conf_file):
tdir = Path(tempdir())
params = manipulate_test_conf(conf_file, tdir)
params[cf.COH_MASK] = coh_mask
params[cf.PARALLEL] = parallel
params[cf.PROCESSES] = 4
params[cf.APSEST] = 1
params[cf.IFG_LKSX], params[cf.IFG_LKSY] = get_lks, get_lks
params[cf.REFNX], params[cf.REFNY] = 4, 4
params[cf.IFG_CROP_OPT] = local_crop
params[cf.ORBITAL_FIT_LOOKS_X], params[cf.ORBITAL_FIT_LOOKS_Y] = orbfit_lks, orbfit_lks
params[cf.ORBITAL_FIT] = 1
params[cf.ORBITAL_FIT_METHOD] = orbfit_method
params[cf.ORBITAL_FIT_DEGREE] = orbfit_degrees
params[cf.REF_EST_METHOD] = ref_est_method
params["rows"], params["cols"] = 3, 2
params["notiles"] = params["rows"] * params["cols"] # number of tiles
print(params)
# write new temp config
output_conf = tdir.joinpath(output_conf_file)
cf.write_config_file(params=params, output_conf_file=output_conf)
return output_conf, params
return modify_params
@pytest.fixture
def create_mpi_files(modified_config_short):
def _create(conf):
mpi_conf, params = modified_config_short(conf, 0, 'mpi_conf.conf')
params = Configuration(mpi_conf).__dict__
conv2tif.main(params)
params = Configuration(mpi_conf).__dict__
prepifg.main(params)
return params # don't need the reamining params
return _create
@pytest.fixture()
def modified_config_largetifs(tempdir, local_crop, get_lks, coh_mask):
orbfit_lks = 1
orbfit_method = 1
orbfit_degrees = 1
ref_est_method = 1
def modify_params(conf_file, parallel, output_conf_file):
tdir = Path(tempdir())
params = manipulate_test_conf(conf_file, tdir)
params[cf.COH_MASK] = coh_mask
params[cf.LARGE_TIFS] = 1
params[cf.PARALLEL] = parallel
params[cf.PROCESSES] = 4
params[cf.APSEST] = 1
params[cf.IFG_LKSX], params[cf.IFG_LKSY] = get_lks, get_lks
params[cf.REFNX], params[cf.REFNY] = 4, 4
params[cf.IFG_CROP_OPT] = local_crop
params[cf.ORBITAL_FIT_LOOKS_X], params[cf.ORBITAL_FIT_LOOKS_Y] = orbfit_lks, orbfit_lks
params[cf.ORBITAL_FIT] = 1
params[cf.ORBITAL_FIT_METHOD] = orbfit_method
params[cf.ORBITAL_FIT_DEGREE] = orbfit_degrees
params[cf.REF_EST_METHOD] = ref_est_method
params["rows"], params["cols"] = 3, 2
params["notiles"] = params["rows"] * params["cols"] # number of tiles
print(params)
# write new temp config
output_conf = tdir.joinpath(output_conf_file)
cf.write_config_file(params=params, output_conf_file=output_conf)
return output_conf, params
return modify_params
@pytest.mark.slow
@pytest.mark.skipif(PYTHON3P6 or PYTHON3P7, reason="Only run in python 3.8")
def test_prepifg_largetifs_vs_python(modified_config_largetifs, gamma_conf, create_mpi_files):
print("\n\n")
print("===x==="*10)
if TRAVIS and np.random.randint(0, 1000) > 499: # skip 50% of tests randomly
pytest.skip("Randomly skipping as part of 50 percent")
params = create_mpi_files(gamma_conf)
sr_conf, params_p = modified_config_largetifs(gamma_conf, 1, 'parallel_conf.conf')
params_p = Configuration(sr_conf).__dict__
conv2tif.main(params_p)
params_p = Configuration(sr_conf).__dict__
prepifg.main(params_p)
params_p = Configuration(sr_conf).__dict__
# convert2tif tests, 17 interferograms
assert_two_dirs_equal(params[cf.OUT_DIR], params_p[cf.OUT_DIR], "*_unw_ifg.tif", 17)
# if coherence masking, compare coh files were converted
if params[cf.COH_MASK]:
assert_two_dirs_equal(params[cf.OUT_DIR], params_p[cf.OUT_DIR], "*_coh.tif", 17)
print("coherence files compared")
# 17 ifgs + 1 dem + 17 mlooked file
assert_two_dirs_equal(params[cf.OUT_DIR], params_p[cf.OUT_DIR], f"*{params[cf.IFG_CROP_OPT]}cr.tif", 35)
else:
# prepifg
# 17 ifgs + 1 dem
assert_two_dirs_equal(params[cf.OUT_DIR], params_p[cf.OUT_DIR], f"*{params[cf.IFG_CROP_OPT]}cr.tif", 18)
print("==========================xxx===========================")
shutil.rmtree(params[cf.OBS_DIR])
shutil.rmtree(params_p[cf.OBS_DIR])
|