https://github.com/shorvath/MammalianMethylationConsortium
Tip revision: b70331d458b457af9c277b92710e7b79d6d1f889 authored by Amin Haghani on 21 January 2026, 23:46:19 UTC
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NEWS.md
# EnsembleAge NEWS
## Version 0.99.0
### NEW FEATURES
- Initial release of EnsembleAge package
- Support for multiple methylation array platforms (Mammal320k, Mammal40k, Human EPIC, Human 450k)
- Automatic platform detection and data preprocessing
- Multiple clock families: EnsembleAge.Static, EnsembleAge.Dynamic, EnsembleDualAge.Static, UniClock2/3, LifespanUberClock, DNAmAge*
- Cross-species epigenetic age prediction capabilities
### IMPROVEMENTS
- Efficient data loading for large datasets
- Automatic probe mapping and orientation detection
- Missing probe imputation with neutral methylation values
- Comprehensive error handling and validation
### BUG FIXES
- Fixed probe mapping issues for different platform formats
- Corrected age acceleration calculations
- Improved sample matching between data and sample sheets
### DOCUMENTATION
- Comprehensive README with usage examples
- Vignette with detailed workflow instructions
- Complete function documentation with examples
### CITATION
This package accompanies the publication: Haghani, A., et al. (2025). EnsembleAge: enhancing epigenetic age assessment with a multi‑clock framework. GeroScience. DOI: 10.1007/s11357-025-01808-1 