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Tip revision: b0922d4a9d37c67192d9b43a288fe2952d42b9e2 authored by Alexey Sergushichev on 20 October 2018, 13:07:32 UTC
version bump to 1.1.5
Tip revision: b0922d4
% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/gseaPlot.R
\title{Returns path to an svg file with enrichment plot}
gseaPlot(es, rankBy, selectedGenes, width, height, vertical = FALSE,
  addHeatmap = FALSE, showAnnotation = NULL)
\item{es}{ExpressionSet object.}

\item{rankBy}{name of the numeric column used for gene ranking}

\item{selectedGenes}{indexes of selected genes (starting from one, in the order of fData)}

\item{width}{width of the image (in inches)}

\item{height}{height of the image (in inches)}

\item{vertical}{whether to use vertical orientation (default: FALSE)}

\item{addHeatmap}{whether to add an expression heatmap, sorted by rankBy (default: FALSE)}

\item{showAnnotation}{a name of column annotation to add to the heatmap, default: NULL (no annotation)}
path to an svg file
Returns path to an svg file with enrichment plot
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