| HEAD | 99a83ce | Merge pull request #6 from wmhilton/patch-1 Not to be confused with the "BARD: Braille and Audio Reading Download" | 04 May 2016, 19:16:30 UTC |
| refs/heads/6fb4cb0fd09dff41d282b10b7f0595c2f2b09659 | e76c39f | Merge branch 'master' of https://github.com/broadinstitute/BARD | 14 June 2013, 15:15:35 UTC |
| refs/heads/Datascript | 3441492 | remove trace statements in auditing | 04 April 2013, 23:06:16 UTC |
| refs/heads/Datascripts | ff48210 | extend swap_element_ID to create a replacement hierarchy record | 16 May 2013, 02:38:31 UTC |
| refs/heads/Swamidass_clustering | bab54e1 | successfully processing the entire Swamidass projects folder | 30 November 2012, 01:22:04 UTC |
| refs/heads/adf | 55b0ffc | added scripts to run import and export, refactored services | 16 April 2014, 19:17:15 UTC |
| refs/heads/ajaxified_webflows | 724fcda | added ajaxified webflows plugin and created default provided ajax webflow | 26 October 2012, 15:48:42 UTC |
| refs/heads/backboneForColdStorage | d737f68 | backbone integ, full screen, and click to compound show | 10 August 2012, 18:34:51 UTC |
| refs/heads/backboneInteg | d737f68 | backbone integ, full screen, and click to compound show | 10 August 2012, 18:34:51 UTC |
| refs/heads/bard-functional-tests | f24c8ae | updated login method. Signed-off-by: Muhammad Rafique <muhammad.rafique@northbaysolutions.net> | 03 February 2014, 13:19:22 UTC |
| refs/heads/bardqueryapi-gw | aba8e3a | improving styles; adding error handling | 14 June 2012, 15:27:40 UTC |
| refs/heads/bigbard-deploy-20130821 | 7ebda83 | Fixing broken ACL functional tests | 15 August 2013, 23:19:03 UTC |
| refs/heads/build_project_steps | 64fede9 | Merge branch 'master' into build_project_steps | 06 December 2012, 15:00:02 UTC |
| refs/heads/cap-acl | ad61da6 | Removed a broken service and an unneeded acl migration | 07 June 2013, 19:23:13 UTC |
| refs/heads/context_item_changes | f1b1292 | Added NumberUtils with support to convert to scientific notation and Tests. Also, started working on the BasicContextItemCommand changes | 23 May 2013, 20:39:02 UTC |
| refs/heads/dataexportapi | 2601cdb | Adding data export API | 25 May 2012, 11:18:46 UTC |
| refs/heads/dataset3-merge | e74cf1f | Checking in small changes to fix earlier problems with moving parent measures | 30 April 2013, 13:47:10 UTC |
| refs/heads/dataset5 | 60e4bd2 | checking in fixes for problems discovered in dataset 5 | 14 May 2013, 19:58:59 UTC |
| refs/heads/dataset5-take-two | e3413c9 | Fixed problem where exception was thrown when it couldn't figure out the group | 19 May 2013, 21:01:26 UTC |
| refs/heads/domain-model-updates-dataExport-updates | ea6dcc5 | added some fixes for tests that were failing | 25 November 2012, 21:28:56 UTC |
| refs/heads/elasticSearchInterface | 3d2289d | wiring up the CAP application with the elastic-search plugin | 12 July 2012, 14:05:14 UTC |
| refs/heads/elasticSearchPlugin | 48c5607 | adding some tests | 10 July 2012, 19:17:06 UTC |
| refs/heads/elasticsearchIndexer | 9b105d5 | update index creation code | 24 July 2012, 18:25:45 UTC |
| refs/heads/epicLolzFailz_statusChange | f156ae9 | partial failed attempt at updating domain model and migration scripts for status changes | 06 February 2013, 00:18:08 UTC |
| refs/heads/functional-tests | 831428b | Added ids to elements in assay edit summary so that the form could be tested. | 04 March 2013, 20:45:43 UTC |
| refs/heads/functionaltests | c26690c | rolling back package import changes refactored the AsssayBaseContextSpec by introducing setup and teardown methods | 22 January 2014, 10:24:29 UTC |
| refs/heads/gh-pages | ba8f36b | change the workflows to use a GUID for element | 09 April 2014, 01:01:47 UTC |
| refs/heads/guidance-ui-wip | 03fe3de | Added guidance to project | 13 August 2013, 18:57:43 UTC |
| refs/heads/homepage | 854a13d | Added redirect so that the home page is accessible from the default URL and from bardWebInterface/index. This should be suitable for incorporation into master, even though the links do not go anywhere | 04 September 2013, 14:43:27 UTC |
| refs/heads/howto | a47c312 | Merge branch 'howto' of github.com:broadinstitute/BARD into howto | 05 November 2013, 12:01:14 UTC |
| refs/heads/iteration.001 | 54e4743 | Merging database migration work and updates to domain classes in BARD app | 18 June 2012, 19:56:20 UTC |
| refs/heads/iteration.002 | 46816e1 | Adding more logging to capture failed authentications | 03 July 2012, 14:19:41 UTC |
| refs/heads/iteration.003 | 57a8d50 | Removing request's IP address whitelist. From now on, all IP addresses with a valid APIKEY are allowed in. | 23 July 2012, 12:20:39 UTC |
| refs/heads/iteration.004 | afd552f | Story 33572729 merging back from master | 30 July 2012, 19:51:07 UTC |
| refs/heads/iteration.005 | d737f68 | backbone integ, full screen, and click to compound show | 10 August 2012, 18:34:51 UTC |
| refs/heads/iteration.006 | bf1ccce | Better way of verifying existence of _TREE tables | 05 September 2012, 19:08:20 UTC |
| refs/heads/iteration.007 | e6e6b68 | reconfigured to use Broad crowd authentication in the short term. Merge remote-tracking branch 'upstream/master' into crowd-auth Conflicts: BARD/grails-app/views/login/auth.gsp | 24 September 2012, 18:36:50 UTC |
| refs/heads/iteration.008 | 2f62bdd | removed ids from display | 18 September 2012, 20:36:00 UTC |
| refs/heads/iteration.009 | e41c759 | fix for scrolling issue As described in https://www.pivotaltracker.com/projects/506277#!/stories/36631881 - noticed that in basic.gsp we were missing a closing div tag, this resulted in the scrolling breaking. - I added the missing tag and scrolling is happy again. | 25 September 2012, 16:57:37 UTC |
| refs/heads/iteration.010 | 2c03efa | forgot to update integration test with modified constraint for AssayContext.contextName | 02 October 2012, 20:03:12 UTC |
| refs/heads/iteration.011 | b274c46 | Modified the repository config to not inherit repositories from plugins We want all artifacts cached in our artifactory server, if a plugin needs an artifact from a repo we currently do not proxy we should update our artifactory instance and add the proxy and work it into the resolution order in the right place. Along with these changes, I also tweaked the config of artifactory to try and eleminate situations were remote repos were timing out. | 22 October 2012, 21:02:11 UTC |
| refs/heads/iteration.012 | f971d2d | changed case in relative path, so template resolved when deployed as war | 06 November 2012, 04:19:27 UTC |
| refs/heads/iteration.013 | d648ad0 | moved these views to a directory with a lower case - this work fine in run-app but fail when deployed as a war with the original upper case AddItemWizard dir. | 17 December 2012, 20:26:00 UTC |
| refs/heads/iteration.015 | 10de2a5 | removed unused sections of assay show page and their templates | 20 December 2012, 22:08:20 UTC |
| refs/heads/iteration.016 | d91c627 | fix to use dropup menus so cards at the botom of the sections have menus appear | 14 January 2013, 22:20:56 UTC |
| refs/heads/iteration.017 | 9778fcc | Fixed bug -- auto-suggetion of descriptor display null if nothing found; clean up some code | 25 January 2013, 19:17:13 UTC |
| refs/heads/iteration.018 | 6714296 | Update dataExport/web-app/schemas/examples/experiment.xml | 21 February 2013, 22:40:40 UTC |
| refs/heads/iteration.019 | 01a5728 | https://www.pivotaltracker.com/story/show/44500171 Make confidence level nullable | 26 February 2013, 22:17:48 UTC |
| refs/heads/iteration.020 | 0928de6 | Trimming extra spaces from ontology item reference | 22 March 2013, 16:57:58 UTC |
| refs/heads/iteration.021 | c4b43a5 | Base unit not offered as option to user when specified on element https://www.pivotaltracker.com/story/show/47316537 - Fixed the query used when a base unit is specified on an attribute, so all units that are convertible to that unit and the unit are returned. - added logic to sort case insensitive based on concatenation of abbreviation and label - updated label displayed in select2 to have abbreviation and label, as abbreviations if not null are not always unique - updated code to select the unit associated with the attribute by default - additionally for fixed the select2 widget to enable search over the the units, with both all the units or only the convertible units | 03 April 2013, 14:25:14 UTC |
| refs/heads/iteration.022 | fbf63bc | merging master to interation.022 for Jacob | 17 April 2013, 21:11:51 UTC |
| refs/heads/iteration.023 | 79a7b0d | fixed capitalization on relationship update | 22 April 2013, 18:15:19 UTC |
| refs/heads/iteration.024 | 828e118 | https://www.pivotaltracker.com/story/show/49552199 | 09 May 2013, 15:17:35 UTC |
| refs/heads/iteration.025 | 5d21866 | Reset the assay Version to "1" after cloning an assay | 23 May 2013, 14:44:42 UTC |
| refs/heads/iteration.026 | 3392f5b | Merge branch 'master' of github.com:broadinstitute/BARD | 06 June 2013, 23:10:38 UTC |
| refs/heads/iteration.027 | 0b90ae8 | updating config.groovy to support basic authentication on the element resource | 28 June 2013, 13:21:23 UTC |
| refs/heads/iteration.028 | cc79a2f | Merge branch 'iteration.028' of github.com:broadinstitute/BARD into iteration.028 | 19 July 2013, 13:40:42 UTC |
| refs/heads/iteration.030 | 1d6f19d | Allowable assayStatus in assaySchema.xsd did not agree with domain model constraints | 08 August 2013, 15:00:20 UTC |
| refs/heads/iteration.031 | 676b56b | Merge branch 'master-local-gilw' | 12 August 2013, 20:06:00 UTC |
| refs/heads/iteration.032 | b3d20fd | Fixed bug introduced in result map validation when changed to incremental parsing | 03 October 2013, 15:18:36 UTC |
| refs/heads/iteration.033 | 67fdc25 | newline in panel addAssay throws exception https://www.pivotaltracker.com/story/show/58362932 | 09 October 2013, 14:28:53 UTC |
| refs/heads/iteration.034 | f4c2096 | Added the exception root cause to the message when reload job fails. | 31 October 2013, 02:12:03 UTC |
| refs/heads/iteration.035 | 77507f4 | Fix for making sure relationship gets parsed correctly when importing from pubchem. | 13 November 2013, 21:09:23 UTC |
| refs/heads/iteration.036 | 174b650 | Fixed method calling an old signature which broke moving experiment measures. [Fixes #60417854] | 08 November 2013, 19:20:53 UTC |
| refs/heads/iteration.037 | f6b3800 | updating the reloading logic to ignore ExternalReferences with null experiment id | 03 December 2013, 12:29:58 UTC |
| refs/heads/iteration.038 | cf6b30c | [Fixes #62051546] Drop-down window in probes under 'Bard is growing' are off the screen | 10 December 2013, 13:53:49 UTC |
| refs/heads/iteration.039 | be5718a | [Fixes #63100816] Add Item - Trying to add attribute from dictionary without 'Value from Dictionary' required field leads the user to 'Review' item read only page. | 06 January 2014, 14:17:37 UTC |
| refs/heads/iteration.040 | 4b041f4 | [Fixes #62704320] View (Assay, Projects, Experiments) - The extra navigation listing appears till the end of the page when the user scrolls down to the page completely. | 20 January 2014, 13:28:44 UTC |
| refs/heads/iteration.041 | 565e412 | Bug fix for exporting projects containing panels [Fixes #65512526] | 10 February 2014, 22:38:47 UTC |
| refs/heads/iteration.042 | 92e789a | set the logger for org.grails.plugin.resource.ResourceMeta to fatal log level we were seeing lot's of emails for 'ERROR ResourceMeta - Resource not found:' since this looks like a script fishing for files, the 100s of emails and error log entries didn't seem to be adding any value so making it less noisy. | 03 March 2014, 19:17:58 UTC |
| refs/heads/iteration.043 | b92cdfb | [Fixes #65883078] Accessibility - 1194.21(a) Application functions are executable from the keyboard (Section 508). | 10 March 2014, 13:56:44 UTC |
| refs/heads/iteration.044 | 5b13083 | Merge branch 'iteration.044-local-gwalzer' into iteration.044 | 20 March 2014, 16:14:27 UTC |
| refs/heads/iteration.044-local-gwalzer | 0221325 | change the logic to always return a list and used breaks instead of returns as returns were breaking the loop and the method. | 19 March 2014, 14:17:30 UTC |
| refs/heads/iteration.044_nci60Load | e821818 | add directories / file paths for use when loading to prod | 25 March 2014, 21:16:34 UTC |
| refs/heads/iteration.045 | f8a59a4 | results displayed incorrectly in molecular spreadsheet https://www.pivotaltracker.com/story/show/68665448 | 04 April 2014, 11:36:56 UTC |
| refs/heads/iteration.046 | 657933b | attempt to move experiment using PubChem AID fails https://www.pivotaltracker.com/story/show/69962930 | 24 April 2014, 21:42:05 UTC |
| refs/heads/iteration.047 | 4a7fe4a | Adding URI column to dictionary terms table | 05 January 2015, 16:33:40 UTC |
| refs/heads/iteration33_remove_measures | 815b341 | Merge branch 'master' into iteration33_remove_measures Conflicts: BARD/grails-app/services/bard/db/experiment/ExperimentService.groovy BARD/grails-app/services/bard/db/experiment/PubchemReformatService.groovy BARD/test/functional/bard/db/registration/MergeAssayDefintionControllerFunctionalSpec.groovy BARD/test/unit/bard/db/experiment/ExperimentServiceUnitSpec.groovy | 09 October 2013, 16:10:34 UTC |
| refs/heads/js-wizard-flow | f7453f5 | Added a pure javascript version of the wizard. | 14 February 2013, 01:36:55 UTC |
| refs/heads/look-at-measureHierachy | aae2131 | Checking in DatasetImport code for parsing results (with unit tests) and JsonTransform (with passing unit test) for exporting results. | 10 April 2014, 14:47:40 UTC |
| refs/heads/master | 99a83ce | Merge pull request #6 from wmhilton/patch-1 Not to be confused with the "BARD: Braille and Audio Reading Download" | 04 May 2016, 19:16:30 UTC |
| refs/heads/master-backbone | d868963 | wip | 24 January 2013, 15:42:43 UTC |
| refs/heads/measure-tree | 2679313 | Added support for expanding and collapsing measures Added dynatree jquery lib for tree view. | 15 January 2013, 15:31:25 UTC |
| refs/heads/mssExtension | a243aec | Merge branch 'master' into mssExtension | 24 October 2013, 15:31:21 UTC |
| refs/heads/my-local-dev | 7480424 | Merge branch 'master' of https://github.com/broadinstitute/BARD into my-local-dev | 08 May 2013, 18:36:53 UTC |
| refs/heads/post_upload_processing | fb7b88c | initial version - tested for a adid not null; assayContext not null; including multiple modified items | 11 October 2012, 16:50:11 UTC |
| refs/heads/qry_by_cids | 0bf21c3 | Make a simplified signature for the standard search. Also restrict return fields | 20 July 2012, 20:59:43 UTC |
| refs/heads/queryCart | 4ee58cd | change button name | 22 August 2012, 17:42:44 UTC |
| refs/heads/query_home_pages | fb86e89 | change default to bard query page | 08 August 2012, 18:47:56 UTC |
| refs/heads/remove-local-repo-deps | be087a7 | Merge branch 'remove-local-repo-deps' of github.com:broadinstitute/BARD into remove-local-repo-deps | 16 January 2014, 14:32:03 UTC |
| refs/heads/separate-process-wip | d72aaab | Merge branch 'master' into separate-process-wip | 13 January 2014, 20:44:41 UTC |
| refs/heads/sharedHeader | d49867d | change the background gradient on the search box slightly | 20 September 2013, 11:57:03 UTC |
| refs/heads/tests-for-dictionary | 09f8534 | Developing set of unit tests for dictionry classes | 22 June 2012, 10:15:01 UTC |
| refs/heads/updating-domain | c471562 | Merge branch 'master' into updating-domain | 25 June 2012, 16:57:25 UTC |
| refs/heads/web-query-iteration.031 | 9ff184b | changing an error message in the showCBAS page | 13 August 2013, 15:22:16 UTC |
| refs/heads/web-query-master | 72f4d5f | The Ringnode integration spec test had been failing every time NCGC change their ID values. Now it has a comprehensive fix, and should not fail again anytime soon ( or so I claim) | 26 August 2013, 15:18:24 UTC |
| refs/heads/wizard_fixed_new_dictionary_item_free_text | aecd09f | Added functionality to add a new dictionary item or free text as a value for a fixed attribute type | 22 March 2013, 19:50:03 UTC |
| refs/heads/yc_units | 4c06a05 | Fixed bug Id: 43154041 in pivotal - related to Auto-complete for assay by name | 29 January 2013, 16:39:17 UTC |
| refs/heads/ycruz_wizard | dedb4bf | wizard wip | 03 January 2013, 19:29:14 UTC |
| refs/tags/Iteration028-20130708 | 52e2002 | Updated according to Iteration 028. updates include the following: - Directory structure i.e. common for constants and enum, test package for spec classes db for database layer etc - Database instance connectivity i.e. connecting to qa and dev instances based on execution string to connect to relevant server - common package for constants and enum - Splitting up functional spec classes based on modular feature i.e. Project Summary, Project Contexts etc. - Scaffold class for reusable methods - Separate module classes for reusable objects etc. Signed-off-by: mrafique <muhammad.rafique@northbaysolutions.net> | 08 July 2013, 06:26:44 UTC |
